Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 6.6e-168 594.0 301 100.0
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 3.6e-150 535.0 279 89.6
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 1.1e-149 533.5 281 88.3
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 1.2e-148 530.0 275 90.9
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 2.0e-148 529.3 278 88.8
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 2.6e-148 528.9 278 88.8
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 1.3e-147 526.6 277 88.8
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 6.4e-147 524.2 281 86.5
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 1.1e-146 523.5 276 89.5
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 2.7e-145 518.8 298 84.6
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 2.7e-145 518.8 281 89.3
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 2.7e-145 518.8 281 87.9
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 3.5e-145 518.5 278 88.1
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 4.6e-145 518.1 282 85.8
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 4.6e-145 518.1 280 88.9
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 4.6e-145 518.1 315 81.3
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 1.0e-144 516.9 281 86.5
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 1.0e-144 516.9 282 87.6
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 6.6e-144 514.2 282 86.2
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 8.7e-144 513.8 282 87.2
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 2.5e-143 512.3 277 87.0
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 9.6e-143 510.4 276 88.8
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 1.6e-142 509.6 278 87.1
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 2.8e-142 508.8 275 89.1
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 2.8e-142 508.8 277 87.0
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 2.8e-142 508.8 277 87.0
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 3.6e-142 508.4 277 85.2
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 4.8e-142 508.1 277 86.6
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 8.1e-142 507.3 277 84.5
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 2.4e-141 505.8 276 86.2
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 5.3e-141 504.6 278 86.3
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 9.0e-141 503.8 274 85.0
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 1.5e-140 503.1 276 85.9
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 1.5e-140 503.1 275 87.6
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 1.5e-140 503.1 275 87.6
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 3.4e-140 501.9 275 87.6
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 9.9e-140 500.4 277 85.2
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 9.9e-140 500.4 272 87.1
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 3.8e-139 498.4 272 86.8
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 8.4e-139 497.3 272 86.4
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 1.4e-138 496.5 276 86.6
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 1.9e-138 496.1 272 86.0
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 2.4e-138 495.7 256 90.2
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 3.2e-138 495.4 276 84.8
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 3.2e-138 495.4 301 80.1
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 9.3e-138 493.8 277 85.2
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 1.6e-137 493.0 277 84.8
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 2.1e-137 492.7 277 84.8
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 2.7e-137 492.3 293 79.5
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 2.7e-137 492.3 273 84.2
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 3.5e-137 491.9 276 84.4
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 6.0e-137 491.1 275 84.4
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 1.3e-136 490.0 273 83.9
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 1.8e-136 489.6 273 83.9
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 1.8e-136 489.6 265 88.3
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 8.7e-136 487.3 280 83.2
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 1.9e-135 486.1 273 83.9
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 2.5e-135 485.7 273 83.5
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 7.4e-135 484.2 273 81.0
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 7.4e-135 484.2 270 87.0
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 2.8e-134 482.3 277 81.6
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 3.7e-134 481.9 298 79.5
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 4.8e-134 481.5 273 83.2
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 3.1e-133 478.8 273 82.8
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 6.9e-133 477.6 275 82.9
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 6.9e-133 477.6 273 84.2
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 9.0e-133 477.2 273 82.1
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 2.0e-132 476.1 278 78.8
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 3.4e-132 475.3 281 81.1
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 3.4e-132 475.3 274 79.6
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 5.8e-132 474.6 280 81.1
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 7.6e-132 474.2 319 74.0
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 7.6e-132 474.2 271 80.4
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 9.9e-132 473.8 271 80.8
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 1.3e-131 473.4 286 79.4
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.3e-131 473.4 276 81.5
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 2.9e-131 472.2 273 79.9
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 2.9e-131 472.2 273 79.9
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 4.9e-131 471.5 271 81.9
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 4.9e-131 471.5 271 80.4
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.4e-130 469.9 274 81.4
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 1.4e-130 469.9 276 82.2
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 2.4e-130 469.2 276 78.6
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 2.4e-130 469.2 273 79.5
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 2.7e-129 465.7 277 82.3
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 2.7e-129 465.7 276 80.8
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 6.0e-129 464.5 275 80.0
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 6.0e-129 464.5 275 80.0
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 1.8e-128 463.0 292 78.1
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 1.1e-127 460.3 277 78.7
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 1.1e-127 460.3 282 80.1
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 7.4e-127 457.6 316 72.2
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 1.3e-126 456.8 273 78.4
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 2.8e-126 455.7 271 78.2
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 3.7e-126 455.3 271 78.6
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 3.7e-126 455.3 273 78.0
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 1.8e-125 453.0 271 80.8
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 3.8e-123 445.3 360 63.9
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 6.5e-123 444.5 274 77.7
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 8.4e-123 444.1 274 77.4
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.0e-120 437.2 304 72.0
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 3.3e-119 432.2 270 73.7
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 9.7e-119 430.6 270 73.7
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 1.1e-117 427.2 277 74.0
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 1.4e-117 426.8 238 85.3
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 5.0e-115 418.3 274 73.4
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 1.8e-109 399.8 217 88.5
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 2.4e-109 399.4 246 77.6
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 2.9e-107 392.5 222 82.9
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 7.9e-105 384.4 199 91.0
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 1.4e-104 383.6 274 69.0
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 2.3e-104 382.9 198 89.9
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 2.3e-104 382.9 291 67.4
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 2.0e-100 369.8 210 81.9
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 2.9e-99 365.9 275 61.1
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 4.7e-97 358.6 276 62.0
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 1.5e-95 353.6 272 62.1
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 7.0e-93 344.7 217 77.0
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 1.5e-90 337.0 189 84.1
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 1.5e-90 337.0 189 84.1
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.6e-81 307.0 234 67.1
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 4.4e-79 298.9 226 61.9
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 1.0e-75 287.7 271 53.5
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 5.7e-71 271.9 297 51.5
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 1.2e-68 264.2 156 82.7
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 9.5e-66 254.6 183 65.0
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 1.2e-65 254.2 155 75.5
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 2.9e-62 243.0 210 54.3
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 6.6e-59 231.9 139 79.1
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 1.5e-55 220.7 266 47.4
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 2.3e-48 196.8 237 47.3
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 3.4e-39 166.4 98 78.6
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 2.9e-38 163.3 272 37.5
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 3.8e-38 162.9 211 41.7
SGA_v2.0_scaffold3G01513 Striga asiatica HOM05D005613 ORTHO05D006903 1.9e-29 134.0 104 63.5
Os11g0302500 Oryza sativa ssp. japonica HOM05D005613 ORTHO05D006903 7.8e-28 128.6 85 69.4
CBR_g48823 Chara braunii HOM05D005613 ORTHO05D006903 4.0e-16 89.7 72 61.1
SEGI_05867 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 1.2e-12 78.2 39 87.2
arahy.Tifrunner.gnm1.ann1.W1BQBA Arachis hypogaea HOM05D005613 ORTHO05D006903 1.6e-12 77.8 45 77.8


User provided reference genes

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