Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K02478 Eucalyptus grandis HOM05D007106 ORTHO05D007770 3.5e-49 198.0 99 100.0
Prupe.5G194500 Prunus persica HOM05D007106 ORTHO05D007770 4.3e-15 84.7 94 54.3
Dinv38719 Davidia involucrata HOM05D007106 ORTHO05D007770 1.6e-14 82.8 98 53.1
CSS0012235 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 3.6e-14 81.6 92 52.2
CSS0040002 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 3.6e-14 81.6 92 52.2
Cpa.g.sc423.1 Carica papaya HOM05D007106 ORTHO05D007770 8.1e-14 80.5 90 48.9
FAN08G1525 Fragaria x ananassa HOM05D007106 ORTHO05D007770 8.1e-14 80.5 95 55.8
FvH4_5g14840 Fragaria vesca HOM05D007106 ORTHO05D007770 1.1e-13 80.1 94 54.3
FAN18G2192 Fragaria x ananassa HOM05D007106 ORTHO05D007770 1.1e-13 80.1 94 54.3
Oeu047292.1 Olea europaea HOM05D007106 ORTHO05D007770 2.3e-13 79.0 95 48.4
Thecc.03G089800 Theobroma cacao HOM05D007106 ORTHO05D007770 2.3e-13 79.0 87 54.0
COL.COLO4_08636 Corchorus olitorius HOM05D007106 ORTHO05D007770 3.1e-13 78.6 91 52.7
SalBow7G1857 Salvia bowleyana HOM05D007106 ORTHO05D007770 8.9e-13 77.0 95 49.5
Actinidia35002 Actinidia chinensis HOM05D007106 ORTHO05D007770 1.2e-12 76.6 93 47.3
RcHm_v2.0_Chr7g0181551 Rosa chinensis HOM05D007106 ORTHO05D007770 1.5e-12 76.3 94 53.2
Actinidia19038 Actinidia chinensis HOM05D007106 ORTHO05D007770 2.6e-12 75.5 93 45.2
Gohir.D03G093700 Gossypium hirsutum HOM05D007106 ORTHO05D007770 2.6e-12 75.5 82 57.3
Gorai.003G097700 Gossypium raimondii HOM05D007106 ORTHO05D007770 2.6e-12 75.5 82 57.3
TAR374G1315 Trochodendron aralioides HOM05D007106 ORTHO05D007770 2.6e-12 75.5 89 52.8
Actinidia04893 Actinidia chinensis HOM05D007106 ORTHO05D007770 3.4e-12 75.1 84 46.4
Cfa018934 Carpinus fangiana HOM05D007106 ORTHO05D007770 3.4e-12 75.1 97 51.5
Cc04_g16540 Coffea canephora HOM05D007106 ORTHO05D007770 3.4e-12 75.1 84 53.6
PGR083G1166 Punica granatum HOM05D007106 ORTHO05D007770 3.4e-12 75.1 91 54.9
Gohir.A03G067200 Gossypium hirsutum HOM05D007106 ORTHO05D007770 4.4e-12 74.7 82 57.3
vmacro17537 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 5.8e-12 74.3 98 49.0
Ciclev10022899m.g Citrus clementina HOM05D007106 ORTHO05D007770 9.9e-12 73.6 96 45.8
CiPaw.11G045300 Carya illinoinensis HOM05D007106 ORTHO05D007770 1.3e-11 73.2 95 48.4
Duzib205G0867 Durio zibethinus HOM05D007106 ORTHO05D007770 1.7e-11 72.8 94 52.1
MD14G1201500 Malus domestica HOM05D007106 ORTHO05D007770 3.7e-11 71.6 94 46.8
Rhsim12G0155900 Rhododendron simsii HOM05D007106 ORTHO05D007770 4.9e-11 71.2 87 47.1
Atru.chr9.252 Acer truncatum HOM05D007106 ORTHO05D007770 6.4e-11 70.9 76 50.0
Nitab4.5_0006000g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 6.4e-11 70.9 100 41.0
Gohir.D07G070600 Gossypium hirsutum HOM05D007106 ORTHO05D007770 8.3e-11 70.5 92 52.2
Gorai.001G074500 Gossypium raimondii HOM05D007106 ORTHO05D007770 8.3e-11 70.5 92 52.2
CiPaw.12G013000 Carya illinoinensis HOM05D007106 ORTHO05D007770 1.1e-10 70.1 84 47.6
Actinidia37624 Actinidia chinensis HOM05D007106 ORTHO05D007770 3.2e-10 68.6 84 48.8
MD06G1194400 Malus domestica HOM05D007106 ORTHO05D007770 4.1e-10 68.2 84 48.8
Manes.14G078900 Manihot esculenta HOM05D007106 ORTHO05D007770 4.1e-10 68.2 96 45.8
Nn3g17263 Nelumbo nucifera HOM05D007106 ORTHO05D007770 4.1e-10 68.2 90 47.8
Peaxi162Scf00274g00521 Petunia axillaris HOM05D007106 ORTHO05D007770 5.4e-10 67.8 106 40.6
Gohir.A07G066100 Gossypium hirsutum HOM05D007106 ORTHO05D007770 7.1e-10 67.4 92 51.1
Manes.06G091700 Manihot esculenta HOM05D007106 ORTHO05D007770 9.2e-10 67.0 102 44.1
QL10p017125 Quercus lobata HOM05D007106 ORTHO05D007770 1.2e-09 66.6 84 48.8
CANSAT80G2807 Cannabis sativa HOM05D007106 ORTHO05D007770 2.1e-09 65.9 98 45.9
vmacro16544 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 2.7e-09 65.5 87 46.0
Hma1.2p1_1936F.1_g308220 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 3.5e-09 65.1 87 46.0
Hma1.2p1_2516F.1_g323695 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 3.5e-09 65.1 87 46.0
Dinv16657 Davidia involucrata HOM05D007106 ORTHO05D007770 4.6e-09 64.7 89 46.1
Phvul.009G186700 Phaseolus vulgaris HOM05D007106 ORTHO05D007770 4.6e-09 64.7 87 51.7
Psat4g050160 Pisum sativum HOM05D007106 ORTHO05D007770 4.6e-09 64.7 85 44.7
PGSC0003DMG400019509 Solanum tuberosum HOM05D007106 ORTHO05D007770 7.8e-09 63.9 78 47.4
TWI15G1028 Tripterygium wilfordii HOM05D007106 ORTHO05D007770 7.8e-09 63.9 99 44.4
GSVIVG01007993001 Vitis vinifera HOM05D007106 ORTHO05D007770 7.8e-09 63.9 80 50.0
THA.LOC104812541 Tarenaya hassleriana HOM05D007106 ORTHO05D007770 1.0e-08 63.5 42 64.3
CsaV3_1G005530 Cucumis sativus L. HOM05D007106 ORTHO05D007770 1.3e-08 63.2 94 42.6
Eucgr.B00514 Eucalyptus grandis HOM05D007106 ORTHO05D007770 1.3e-08 63.2 92 41.3
Hund02644 Selenicereus undatus HOM05D007106 ORTHO05D007770 1.3e-08 63.2 94 44.7
Solyc03g115950.3 Solanum lycopersicum HOM05D007106 ORTHO05D007770 2.3e-08 62.4 77 49.4
Nitab4.5_0001128g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 3.0e-08 62.0 102 36.3
ClCG04G012220 Citrullus lanatus HOM05D007106 ORTHO05D007770 6.6e-08 60.8 90 43.3
MELO3C001986.2 Cucumis melo HOM05D007106 ORTHO05D007770 8.6e-08 60.5 96 40.6
Sed0002642 Sechium edule HOM05D007106 ORTHO05D007770 1.9e-07 59.3 91 44.0
Migut.I00186 Erythranthe guttata HOM05D007106 ORTHO05D007770 4.3e-07 58.2 33 75.8
Lj1g0012300 Lotus japonicus HOM05D007106 ORTHO05D007770 4.3e-07 58.2 82 41.5
Nitab4.5_0000121g0170 Nicotiana tabacum HOM05D007106 ORTHO05D007770 7.3e-07 57.4 83 44.6
Peaxi162Scf01256g00221 Petunia axillaris HOM05D007106 ORTHO05D007770 9.5e-07 57.0 82 46.3
THA.LOC104821419 Tarenaya hassleriana HOM05D012999 ORTHO05D007770 9.5e-07 57.0 95 37.9
Sed0016719 Sechium edule HOM05D007106 ORTHO05D007770 1.2e-06 56.6 93 41.9
Haze_07318 Corylus avellana HOM05D007106 ORTHO05D007770 2.1e-06 55.8 33 75.8
Lsat_1_v5_gn_5_19801 Lactuca sativa HOM05D007106 ORTHO05D007770 2.8e-06 55.5 82 42.7
PGSC0003DMG400019989 Solanum tuberosum HOM05D007106 ORTHO05D007770 2.8e-06 55.5 61 52.5
TPR.G9262 Trifolium pratense HOM05D007106 ORTHO05D007770 2.8e-06 55.5 87 41.4
Aqoxy3G03422 Aquilegia oxysepala HOM05D007106 ORTHO05D007770 3.6e-06 55.1 95 40.0
Oeu022764.1 Olea europaea HOM05D007106 ORTHO05D007770 3.6e-06 55.1 92 44.6
Glyma.06G194600 Glycine max HOM05D007106 ORTHO05D007770 4.7e-06 54.7 82 45.1
Psat5g199960 Pisum sativum HOM05D007106 ORTHO05D007770 4.7e-06 54.7 87 36.8
Potri.015G062300 Populus trichocarpa HOM05D007106 ORTHO05D007770 4.7e-06 54.7 96 42.7
ATR0564G057 Amborella trichopoda HOM05D007106 ORTHO05D007770 6.2e-06 54.3 93 41.9


User provided reference genes

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