Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 3.2e-110 401.7 198 100.0
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 2.8e-98 362.1 245 77.6
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 2.0e-80 302.8 168 85.1
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 4.6e-77 291.6 170 81.2
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 4.6e-77 291.6 172 77.3
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 3.9e-76 288.5 169 80.5
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 6.6e-76 287.7 170 79.4
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 8.7e-76 287.3 173 76.3
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 1.1e-75 287.0 187 72.2
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 1.1e-75 287.0 170 80.0
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 1.1e-75 287.0 192 72.9
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 1.9e-75 286.2 172 76.7
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 9.6e-75 283.9 177 74.0
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 9.6e-75 283.9 172 76.7
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 1.3e-74 283.5 190 71.1
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 1.6e-74 283.1 172 77.3
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 4.8e-74 281.6 168 78.0
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 1.1e-73 280.4 209 68.4
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 1.1e-73 280.4 173 75.7
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 1.1e-73 280.4 192 70.8
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 1.8e-73 279.6 193 69.9
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 2.4e-73 279.3 195 68.7
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 4.0e-73 278.5 171 77.8
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 4.0e-73 278.5 172 76.2
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 5.3e-73 278.1 162 80.9
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 5.3e-73 278.1 171 76.0
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 9.0e-73 277.3 170 77.1
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 9.0e-73 277.3 170 77.1
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 9.0e-73 277.3 173 74.6
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 1.5e-72 276.6 168 77.4
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 1.5e-72 276.6 171 74.3
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 2.0e-72 276.2 171 76.6
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 2.0e-72 276.2 170 76.5
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 2.6e-72 275.8 177 73.4
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 2.6e-72 275.8 171 77.8
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 3.4e-72 275.4 171 76.6
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 7.6e-72 274.2 168 75.6
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 7.6e-72 274.2 169 75.7
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 7.6e-72 274.2 188 70.2
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 7.6e-72 274.2 170 75.3
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 9.9e-72 273.9 171 77.2
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 2.2e-71 272.7 185 70.8
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 3.8e-71 271.9 193 68.9
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 3.8e-71 271.9 167 77.2
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 4.9e-71 271.6 188 69.7
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 8.4e-71 270.8 174 73.6
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 1.1e-70 270.4 169 73.4
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 1.1e-70 270.4 194 67.5
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.9e-70 269.6 190 70.5
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 1.9e-70 269.6 173 73.4
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 1.9e-70 269.6 173 72.8
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 3.2e-70 268.9 173 72.8
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 4.2e-70 268.5 175 71.4
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 7.1e-70 267.7 174 72.4
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 9.3e-70 267.3 171 74.3
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 1.6e-69 266.5 194 67.0
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 1.6e-69 266.5 173 72.3
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 3.5e-69 265.4 183 68.3
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 3.5e-69 265.4 174 73.6
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 6.0e-69 264.6 181 72.9
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 1.0e-68 263.8 195 68.2
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.0e-68 263.8 195 68.2
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 1.3e-68 263.5 182 69.8
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 1.8e-68 263.1 187 69.0
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 1.8e-68 263.1 167 73.1
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 8.7e-68 260.8 195 67.7
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 4.3e-67 258.5 166 75.3
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 4.3e-67 258.5 225 60.4
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 5.6e-67 258.1 166 73.5
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 1.3e-66 256.9 184 67.4
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 1.3e-66 256.9 174 69.0
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 4.8e-66 255.0 206 63.6
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 4.8e-66 255.0 176 66.5
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 6.2e-66 254.6 162 74.1
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 8.1e-66 254.2 173 69.4
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.1e-65 253.8 195 66.7
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 6.9e-65 251.1 204 62.7
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 6.0e-61 238.0 144 77.8
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 6.7e-60 234.6 139 76.3
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 1.1e-59 233.8 142 76.8
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 1.1e-59 233.8 208 57.7
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 1.5e-59 233.4 165 70.9
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 2.5e-59 232.6 188 63.3
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 3.3e-59 232.3 148 72.3
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 2.8e-58 229.2 258 49.2
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 8.2e-58 227.6 140 75.0
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 1.3e-55 220.3 147 70.1
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 5.0e-55 218.4 156 68.6
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 1.4e-54 216.9 156 68.6
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.4e-46 190.3 124 71.8
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 1.4e-46 190.3 122 69.7
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 2.5e-46 189.5 122 71.3
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 9.4e-46 187.6 122 70.5
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 6.3e-42 174.9 218 45.4
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 1.9e-38 163.3 180 45.0
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 1.2e-37 160.6 183 47.5
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 3.6e-29 132.5 135 56.3
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 3.3e-27 125.9 74 75.7
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 1.8e-20 103.6 242 28.5
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 4.9e-10 68.9 93 50.5
CSS0032451 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 1.2e-08 64.3 55 60.0
CSS0027054 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 1.6e-08 63.9 37 83.8
THA.LOC104826924 Tarenaya hassleriana HOM05D002804 ORTHO05D003755 2.9e-07 59.7 47 68.1
AL6G13060 Arabidopsis lyrata HOM05D002804 ORTHO05D003755 8.6e-07 58.2 49 65.3
CSS0044668 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 1.1e-06 57.8 35 80.0


User provided reference genes

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