Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 2.4e-123 445.7 245 100.0
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 1.2e-98 363.6 245 77.6
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 6.5e-81 304.7 244 68.9
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 3.6e-79 298.9 175 78.9
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 6.7e-78 294.7 175 76.6
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 3.3e-77 292.4 170 81.2
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 4.4e-77 292.0 250 62.8
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 7.4e-77 291.2 175 76.6
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 7.4e-77 291.2 173 79.2
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 1.7e-76 290.0 176 76.7
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 2.2e-76 289.7 172 77.9
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 6.3e-76 288.1 177 76.8
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 8.2e-76 287.7 175 77.7
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 1.1e-75 287.3 175 76.0
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 1.1e-75 287.3 169 79.9
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 1.8e-75 286.6 172 78.5
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 5.3e-75 285.0 249 65.9
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 7.0e-75 284.6 175 77.7
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 7.0e-75 284.6 178 74.7
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 1.6e-74 283.5 168 78.6
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 2.0e-74 283.1 168 79.2
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 2.6e-74 282.7 174 74.7
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 3.5e-74 282.3 173 76.3
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 4.5e-74 282.0 176 74.4
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 5.9e-74 281.6 177 74.6
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 7.7e-74 281.2 177 75.1
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 7.7e-74 281.2 177 75.1
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 1.3e-73 280.4 180 73.9
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 1.7e-73 280.0 171 78.4
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 2.2e-73 279.6 175 76.0
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 2.2e-73 279.6 175 75.4
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 2.9e-73 279.3 171 77.8
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 2.9e-73 279.3 174 77.0
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 2.9e-73 279.3 170 75.9
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 3.8e-73 278.9 175 76.0
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 6.5e-73 278.1 179 73.7
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 8.5e-73 277.7 171 76.0
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 1.1e-72 277.3 175 74.3
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 1.9e-72 276.6 171 77.8
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 1.9e-72 276.6 170 75.3
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 2.5e-72 276.2 176 72.7
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 2.5e-72 276.2 173 75.1
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 7.2e-72 274.6 173 74.0
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 1.2e-71 273.9 172 76.2
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 1.6e-71 273.5 168 75.6
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 1.6e-71 273.5 177 74.6
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 1.6e-71 273.5 174 73.6
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 3.6e-71 272.3 174 73.0
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 3.6e-71 272.3 169 74.0
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 6.1e-71 271.6 178 71.3
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 8.0e-71 271.2 174 72.4
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 8.0e-71 271.2 176 72.2
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 1.0e-70 270.8 175 72.0
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 1.0e-70 270.8 177 72.9
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 1.0e-70 270.8 236 64.8
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.8e-70 270.0 168 76.8
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 1.8e-70 270.0 174 73.0
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 4.0e-70 268.9 183 72.7
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 4.0e-70 268.9 174 71.8
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 5.2e-70 268.5 177 71.2
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 3.3e-69 265.8 246 58.9
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 4.4e-69 265.4 176 73.3
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 7.5e-69 264.6 177 70.6
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 9.7e-69 264.2 167 73.1
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 2.8e-68 262.7 176 72.7
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 3.7e-68 262.3 166 74.1
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 4.8e-68 261.9 180 69.4
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 8.2e-68 261.2 176 71.6
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.8e-67 260.0 166 75.3
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 1.8e-67 260.0 273 53.5
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 3.1e-67 259.2 175 68.6
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 7.0e-67 258.1 184 67.4
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 9.1e-67 257.7 174 69.0
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 1.6e-66 256.9 217 60.8
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 2.7e-66 256.1 246 57.7
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 1.3e-65 253.8 173 69.4
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 5.0e-65 251.9 162 73.5
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 1.8e-62 243.4 144 79.2
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 3.0e-62 242.7 147 78.9
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 9.8e-61 237.7 142 77.5
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 1.7e-60 236.9 208 58.2
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 2.8e-60 236.1 150 74.0
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 3.7e-60 235.7 148 72.3
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 1.1e-59 234.2 139 76.3
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 2.7e-58 229.6 140 75.7
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 1.0e-57 227.6 247 49.4
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 1.2e-55 220.7 147 70.1
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 1.6e-55 220.3 145 71.0
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 4.7e-55 218.8 145 71.0
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 3.8e-49 199.1 122 73.0
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 2.1e-47 193.4 124 72.6
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 4.7e-47 192.2 122 72.1
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 1.8e-46 190.3 122 71.3
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 4.1e-43 179.1 218 45.9
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 6.2e-39 165.2 188 46.8
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 1.1e-38 164.5 170 45.9
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.8e-30 137.1 77 81.8
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 3.7e-28 129.4 74 77.0
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 1.2e-18 97.8 130 38.5
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 2.1e-10 70.5 87 52.9
CSS0032451 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 8.7e-09 65.1 52 63.5
CSS0027054 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 1.1e-08 64.7 34 91.2
CSS0044668 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 4.8e-07 59.3 35 82.9
THA.LOC104826924 Tarenaya hassleriana HOM05D002804 ORTHO05D003755 4.0e-06 56.2 31 83.9
AL6G13060 Arabidopsis lyrata HOM05D002804 ORTHO05D003755 5.3e-06 55.8 34 79.4


User provided reference genes

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