Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 1.3e-285 985.7 521 100.0
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 1.9e-170 603.2 515 58.8
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 1.5e-164 583.6 522 58.2
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 5.0e-163 578.6 518 59.5
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 6.5e-163 578.2 521 57.8
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 1.4e-162 577.0 518 59.3
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 2.5e-162 576.2 521 57.8
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 1.8e-160 570.1 522 58.4
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 3.9e-160 568.9 518 58.7
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 3.9e-160 568.9 518 58.7
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 9.7e-159 564.3 516 56.8
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 9.7e-159 564.3 521 56.8
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 2.2e-158 563.1 516 56.6
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 1.2e-156 557.4 527 58.3
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 1.3e-155 553.9 524 59.4
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 3.2e-154 549.3 517 54.7
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 1.4e-152 543.9 515 54.2
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 6.3e-150 535.0 522 51.5
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 2.4e-149 533.1 516 56.6
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 9.1e-149 531.2 482 56.8
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 1.1e-146 524.2 495 54.1
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 4.2e-146 522.3 515 52.4
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 7.2e-146 521.5 531 53.7
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 9.4e-146 521.2 439 58.1
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 1.6e-145 520.4 512 52.1
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 4.7e-145 518.8 512 54.1
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 1.4e-144 517.3 520 52.9
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 2.3e-144 516.5 517 50.9
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 5.2e-144 515.4 519 55.7
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 8.8e-144 514.6 516 53.9
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.5e-143 513.8 516 53.3
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 1.7e-142 510.4 522 54.6
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 1.7e-142 510.4 515 53.8
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 4.8e-142 508.8 494 57.1
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 1.8e-141 506.9 518 54.2
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 5.3e-141 505.4 497 53.7
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 7.0e-141 505.0 497 53.9
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 9.1e-141 504.6 518 53.9
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 9.1e-141 504.6 512 52.5
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 2.6e-140 503.1 518 53.3
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 3.5e-140 502.7 516 51.9
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 4.5e-140 502.3 510 53.9
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 7.7e-140 501.5 514 49.8
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 2.2e-139 500.0 528 54.9
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 3.8e-139 499.2 515 53.4
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 3.8e-139 499.2 519 53.4
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 3.8e-139 499.2 514 50.6
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 6.5e-139 498.4 535 51.4
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 8.5e-139 498.0 517 53.8
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 8.5e-139 498.0 494 52.4
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 5.5e-138 495.4 510 51.4
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 5.5e-138 495.4 518 50.6
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.6e-137 493.8 524 49.8
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 2.7e-137 493.0 510 51.4
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 8.0e-137 491.5 518 52.9
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 4.0e-136 489.2 519 53.2
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 4.0e-136 489.2 520 52.7
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 4.0e-136 489.2 494 53.2
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 6.8e-136 488.4 510 52.5
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 8.8e-136 488.0 517 52.6
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 1.2e-135 487.6 493 54.6
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 2.6e-135 486.5 522 50.8
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 3.4e-135 486.1 519 52.8
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 4.4e-135 485.7 510 50.6
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 7.5e-135 485.0 515 52.8
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 1.7e-134 483.8 527 54.1
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 2.0e-132 476.9 522 51.0
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 1.1e-130 471.1 522 48.9
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 4.7e-129 465.7 493 49.5
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 6.1e-129 465.3 491 51.9
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 6.1e-129 465.3 492 51.2
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 3.0e-128 463.0 495 50.7
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 6.8e-128 461.8 536 52.8
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 1.2e-127 461.1 519 47.2
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 2.0e-127 460.3 495 50.7
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 7.5e-127 458.4 518 51.7
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 9.8e-127 458.0 523 49.1
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 6.3e-126 455.3 499 50.9
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 1.3e-123 447.6 518 46.7
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 1.7e-123 447.2 493 49.1
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 3.8e-123 446.0 513 51.7
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 5.0e-123 445.7 496 50.4
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 5.0e-123 445.7 491 53.6
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 3.3e-122 443.0 496 50.2
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 3.3e-122 443.0 516 45.3
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 5.5e-122 442.2 529 47.6
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 9.5e-122 441.4 518 47.7
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.2e-121 441.0 399 57.4
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 1.8e-120 437.2 514 48.6
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 1.5e-119 434.1 506 49.6
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 1.0e-115 421.4 516 47.9
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.6e-113 414.1 494 47.4
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 2.3e-112 410.2 491 47.0
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 8.9e-112 408.3 343 58.9
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 7.5e-111 405.2 494 46.8
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 1.9e-109 400.6 400 54.8
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 1.0e-107 394.8 540 45.0
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 3.9e-107 392.9 474 50.4
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 3.0e-99 366.7 336 54.2
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 9.2e-93 345.1 270 62.6
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 3.6e-89 333.2 384 46.6
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 1.2e-76 291.6 347 46.1
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 1.9e-74 284.3 198 66.7
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 1.9e-74 284.3 198 66.7
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 2.5e-74 283.9 328 51.2
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 1.9e-69 267.7 220 60.0
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 1.1e-64 251.9 531 33.1
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 4.0e-64 250.0 510 34.3
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 5.8e-63 246.1 532 30.6
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 3.0e-59 233.8 215 49.8
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 3.3e-50 203.8 519 29.5
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 1.4e-40 171.8 276 35.9
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 2.0e-34 151.4 196 50.0
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 2.3e-27 127.9 143 45.5
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 2.6e-26 124.4 172 41.3
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 5.7e-26 123.2 143 44.1
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-25 122.1 173 48.6
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 1.6e-23 115.2 116 51.7
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 2.5e-21 107.8 226 33.2
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 1.2e-20 105.5 116 46.6
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 3.0e-19 100.9 117 46.2
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 2.8e-17 94.4 123 45.5
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 9.8e-10 69.3 117 37.6
Actinidia33399 Actinidia chinensis HOM05D006455 ORTHO05D008098 4.5e-07 60.5 39 59.0


User provided reference genes

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