Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 1.2e-104 383.3 206 100.0
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 1.1e-60 237.3 210 64.3
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 1.4e-55 220.3 181 66.3
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 1.8e-55 219.9 181 65.2
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 8.8e-55 217.6 192 63.0
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 2.6e-54 216.1 181 66.9
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 7.4e-54 214.5 185 64.9
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 2.8e-53 212.6 181 63.5
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 4.8e-53 211.8 182 61.5
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 6.3e-53 211.5 197 60.4
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 7.0e-52 208.0 169 63.9
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 1.6e-51 206.8 198 62.1
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 2.0e-51 206.5 198 60.1
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 5.0e-50 201.8 158 67.7
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 1.1e-49 200.7 210 60.0
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 1.5e-49 200.3 211 54.5
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 2.5e-49 199.5 181 63.0
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 3.2e-49 199.1 190 60.0
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 3.2e-49 199.1 187 62.0
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 4.2e-49 198.7 188 59.0
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 5.5e-49 198.4 175 59.4
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 7.2e-49 198.0 195 59.5
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 7.2e-49 198.0 198 58.1
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 1.2e-48 197.2 209 56.9
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.2e-48 197.2 181 62.4
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 2.7e-48 196.1 220 56.8
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.7e-48 196.1 175 58.9
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.7e-48 196.1 175 58.9
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 2.7e-48 196.1 186 62.9
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 3.6e-48 195.7 181 61.9
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 4.7e-48 195.3 175 58.9
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 1.4e-47 193.7 188 60.6
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 4.0e-47 192.2 194 59.3
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 8.8e-47 191.0 174 60.3
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 1.2e-46 190.7 171 59.1
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 1.2e-46 190.7 175 60.0
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.2e-46 190.7 175 60.0
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 1.5e-46 190.3 169 62.1
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 2.6e-46 189.5 182 62.6
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 4.4e-46 188.7 175 61.7
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 5.7e-46 188.3 183 59.6
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 5.7e-46 188.3 189 56.6
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 7.5e-46 188.0 189 57.1
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 9.7e-46 187.6 196 55.1
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 2.8e-45 186.0 171 59.1
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 3.7e-45 185.7 189 58.7
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 8.2e-45 184.5 189 56.6
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 1.1e-44 184.1 209 55.5
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 1.4e-44 183.7 196 56.6
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 7.0e-44 181.4 176 57.4
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 1.6e-43 180.3 189 56.6
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 1.6e-43 180.3 170 59.4
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 2.7e-43 179.5 189 56.1
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 4.5e-43 178.7 160 60.6
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 4.5e-43 178.7 185 54.1
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 7.7e-43 177.9 166 61.4
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 1.1e-41 174.1 165 61.2
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 1.6e-40 170.2 167 57.5
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 8.0e-40 167.9 194 53.6
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 1.8e-39 166.8 196 52.6
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 2.3e-39 166.4 175 53.7
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 3.0e-39 166.0 190 52.1
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 5.2e-39 165.2 212 49.5
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 2.0e-38 163.3 109 72.5
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 2.0e-38 163.3 190 51.1
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 3.4e-38 162.5 114 70.2
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 1.3e-37 160.6 187 50.8
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 2.2e-37 159.8 215 47.0
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 2.8e-37 159.5 188 50.0
SGA_v2.0_scaffold25G10988 Striga asiatica HOM05D005829 ORTHO05D007246 2.8e-37 159.5 232 45.3
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 3.7e-37 159.1 181 51.9
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 6.3e-37 158.3 202 50.0
BcaC08g45615 Brassica carinata HOM05D005829 ORTHO05D007246 8.3e-37 157.9 178 51.7
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 1.1e-36 157.5 98 75.5
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 1.1e-36 157.5 188 49.5
BcaB03g15734 Brassica carinata HOM05D005829 ORTHO05D007246 4.1e-36 155.6 189 47.6
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 5.4e-36 155.2 182 53.8
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 1.2e-35 154.1 165 51.5
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 1.2e-35 154.1 165 50.9
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 1.6e-35 153.7 216 46.3
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 2.7e-35 152.9 184 51.6
AL2G33720 Arabidopsis lyrata HOM05D005829 ORTHO05D007246 1.7e-34 150.2 183 49.7
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 1.7e-34 150.2 176 51.1
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 2.9e-34 149.4 189 50.8
C06p33760 Brassica napus HOM05D005829 ORTHO05D007246 1.9e-33 146.7 178 52.8
BolC6t38490H Brassica oleracea HOM05D005829 ORTHO05D007246 1.9e-33 146.7 178 52.8
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 1.9e-33 146.7 167 51.5
BcaC03g15467 Brassica carinata HOM05D005829 ORTHO05D007246 4.2e-33 145.6 215 45.6
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 4.2e-33 145.6 216 45.4
C02p31470 Brassica napus HOM05D005829 ORTHO05D007246 4.2e-33 145.6 215 45.6
BolC2t09178H Brassica oleracea HOM05D005829 ORTHO05D007246 4.2e-33 145.6 215 45.6
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 7.2e-33 144.8 218 48.2
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 7.2e-33 144.8 218 48.2
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 1.6e-32 143.7 215 45.6
A07p29590 Brassica napus HOM05D005829 ORTHO05D007246 4.7e-32 142.1 179 50.8
Thhalv10019131m.g Eutrema salsugineum HOM05D005829 ORTHO05D007246 6.1e-32 141.7 218 45.0
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 6.1e-32 141.7 196 46.9
BraA07t30600Z Brassica rapa HOM05D005829 ORTHO05D007246 2.3e-31 139.8 214 45.3
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 4.0e-31 139.0 181 49.7
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 8.9e-31 137.9 185 49.2
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 3.4e-30 136.0 178 49.4
BcaC09g48855 Brassica carinata HOM05D005829 ORTHO05D007246 5.7e-30 135.2 114 64.0
C01p45190 Brassica napus HOM05D005829 ORTHO05D007246 5.7e-30 135.2 114 64.0
BolC1t04492H Brassica oleracea HOM05D005829 ORTHO05D007246 5.7e-30 135.2 114 64.0
SEGI_06072 Sequoiadendron giganteum HOM05D005829 ORTHO05D007246 7.5e-30 134.8 96 63.5
AT1G73885 Arabidopsis thaliana HOM05D005829 ORTHO05D007246 6.3e-29 131.7 94 66.0
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 5.4e-28 128.6 184 47.8
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 4.5e-27 125.6 162 44.4
BcaC03g15466 Brassica carinata HOM05D005829 ORTHO05D007246 6.6e-26 121.7 209 43.5
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 2.5e-25 119.8 177 46.9
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 5.6e-25 118.6 102 57.8
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis HOM05D005829 ORTHO05D007246 4.0e-23 112.5 91 57.1
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis HOM05D005829 ORTHO05D007246 4.0e-23 112.5 91 57.1
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 5.2e-23 112.1 181 42.5
Nn3g17806 Nelumbo nucifera HOM05D005829 ORTHO05D007246 2.9e-21 106.3 107 53.3
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 3.7e-21 105.9 86 59.3
Mapoly0028s0124 Marchantia polymorpha HOM05D005829 ORTHO05D007246 6.0e-19 98.6 102 47.1
COL.COLO4_04672 Corchorus olitorius HOM05D005829 ORTHO05D007246 7.8e-19 98.2 134 48.5
THA.LOC104813291 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 9.5e-17 91.3 69 72.5
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 6.8e-15 85.1 160 38.1
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 8.9e-15 84.7 58 70.7
Pp3c4_12650 Physcomitrium patens HOM05D005829 ORTHO05D007246 8.9e-15 84.7 85 48.2
Pp3c4_12780 Physcomitrium patens HOM05D005829 ORTHO05D007246 8.9e-15 84.7 85 48.2
Actinidia24460 Actinidia chinensis HOM05D005829 ORTHO05D007246 3.4e-14 82.8 43 79.1
Phvul.004G158500 Phaseolus vulgaris HOM05D005829 ORTHO05D007246 2.0e-11 73.6 206 32.5
VMungo0464G0155 Vigna mungo HOM05D006108 ORTHO05D007605 3.9e-10 69.3 197 34.0
SMO241G0040 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 4.3e-09 65.9 98 40.8
SMO232G0029 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 1.2e-08 64.3 92 40.2
Glyma.09G185300 Glycine max HOM05D005829 ORTHO05D007246 1.4e-07 60.8 202 29.2
Glyma.07G090700 Glycine max HOM05D005829 ORTHO05D007246 1.8e-07 60.5 105 37.1
CBR_g29305 Chara braunii HOM05D005829 ORTHO05D007246 1.2e-06 57.8 36 66.7
FAN22G1271 Fragaria x ananassa HOM05D038641 ORTHO05D035590 3.4e-06 56.2 63 49.2


User provided reference genes

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