Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 2.3e-57 225.3 111 100.0
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 6.7e-33 144.1 110 63.6
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 4.8e-31 137.9 111 63.1
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 6.2e-31 137.5 116 65.5
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 6.9e-30 134.0 111 61.3
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 6.9e-30 134.0 111 61.3
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 1.2e-29 133.3 111 60.4
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.6e-29 132.1 111 60.4
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 4.5e-29 131.3 117 62.4
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 5.8e-29 131.0 112 60.7
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 7.6e-29 130.6 111 60.4
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 1.7e-28 129.4 113 59.3
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 1.7e-28 129.4 111 60.4
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 1.7e-28 129.4 112 59.8
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 3.8e-28 128.3 112 61.6
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 8.4e-28 127.1 111 60.4
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 8.4e-28 127.1 112 61.6
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 1.1e-27 126.7 117 61.5
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.1e-27 126.7 117 61.5
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.1e-27 126.7 117 61.5
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 2.4e-27 125.6 113 59.3
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 3.2e-27 125.2 112 58.0
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 3.2e-27 125.2 112 58.0
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 3.2e-27 125.2 112 61.6
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 5.5e-27 124.4 115 58.3
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 5.5e-27 124.4 112 57.1
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 5.5e-27 124.4 110 57.3
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 7.1e-27 124.0 103 58.3
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 7.1e-27 124.0 88 65.9
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 7.1e-27 124.0 120 60.0
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 7.1e-27 124.0 113 58.4
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 7.1e-27 124.0 112 58.9
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 9.3e-27 123.6 113 61.1
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.1e-26 122.5 112 58.9
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 2.1e-26 122.5 111 60.4
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 2.7e-26 122.1 110 60.9
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 3.5e-26 121.7 111 58.6
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 4.6e-26 121.3 112 58.0
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 6.0e-26 120.9 111 57.7
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 7.9e-26 120.6 118 55.9
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 1.0e-25 120.2 100 60.0
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 1.0e-25 120.2 116 56.9
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 1.3e-25 119.8 115 55.7
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 3.9e-25 118.2 117 56.4
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 5.1e-25 117.9 113 58.4
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 8.7e-25 117.1 111 54.1
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 1.1e-24 116.7 114 51.8
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 3.3e-24 115.2 113 57.5
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 5.6e-24 114.4 114 50.0
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 9.6e-24 113.6 109 55.0
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 9.6e-24 113.6 111 53.2
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 9.6e-24 113.6 60 83.3
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 1.3e-23 113.2 103 55.3
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 1.6e-23 112.8 115 53.9
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 2.1e-23 112.5 58 82.8
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 2.8e-23 112.1 109 54.1
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 2.8e-23 112.1 100 59.0
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 2.8e-23 112.1 80 62.5
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 2.8e-23 112.1 114 55.3
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 2.8e-23 112.1 113 54.9
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 3.7e-23 111.7 109 53.2
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 3.7e-23 111.7 109 53.2
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 3.7e-23 111.7 109 53.2
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 3.7e-23 111.7 109 53.2
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 3.7e-23 111.7 87 60.9
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 3.7e-23 111.7 104 58.7
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 4.8e-23 111.3 109 54.1
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 4.8e-23 111.3 77 68.8
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 6.2e-23 110.9 100 50.0
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 6.2e-23 110.9 107 55.1
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 6.2e-23 110.9 110 54.5
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 8.2e-23 110.5 108 53.7
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 1.1e-22 110.2 100 57.0
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 1.1e-22 110.2 111 54.1
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 1.1e-22 110.2 102 54.9
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 1.1e-22 110.2 102 54.9
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 1.1e-22 110.2 102 54.9
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 1.4e-22 109.8 51 90.2
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 1.4e-22 109.8 111 52.3
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 1.8e-22 109.4 107 56.1
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 2.4e-22 109.0 76 63.2
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 2.4e-22 109.0 106 54.7
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 3.1e-22 108.6 102 57.8
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 3.1e-22 108.6 106 55.7
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 4.0e-22 108.2 101 57.4
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 4.0e-22 108.2 123 50.4
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 4.0e-22 108.2 111 52.3
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 5.3e-22 107.8 111 53.2
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 5.3e-22 107.8 113 55.8
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 5.3e-22 107.8 110 52.7
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 5.3e-22 107.8 78 60.3
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 6.9e-22 107.5 72 65.3
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 9.0e-22 107.1 107 53.3
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 1.2e-21 106.7 111 50.5
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 1.5e-21 106.3 82 62.2
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 1.5e-21 106.3 98 57.1
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 2.0e-21 105.9 50 88.0
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 2.0e-21 105.9 110 53.6
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 2.6e-21 105.5 111 50.5
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 3.4e-21 105.1 113 49.6
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 3.4e-21 105.1 50 84.0
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 1.0e-20 103.6 109 56.0
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 1.0e-20 103.6 107 50.5
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 2.9e-20 102.1 105 45.7
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 3.8e-20 101.7 52 80.8
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 4.2e-19 98.2 47 78.7
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 9.3e-19 97.1 112 47.3
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 6.0e-18 94.4 107 45.8
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 7.9e-18 94.0 46 80.4
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 1.0e-17 93.6 117 46.2
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 3.9e-17 91.7 101 52.5
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 8.7e-17 90.5 112 44.6
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 4.8e-15 84.7 49 65.3
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 1.8e-14 82.8 112 47.3
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 1.8e-14 82.8 105 41.9
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 1.5e-13 79.7 49 65.3


User provided reference genes

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