Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 1.2e-157 559.7 262 100.0
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 1.4e-118 429.9 262 77.1
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 2.7e-117 425.6 260 75.8
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 1.3e-116 423.3 256 77.0
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 1.3e-116 423.3 262 74.4
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 2.3e-116 422.5 258 75.2
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 2.3e-116 422.5 255 76.9
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 3.0e-116 422.2 262 76.3
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 2.5e-115 419.1 261 73.9
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 2.5e-115 419.1 272 73.2
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 2.5e-115 419.1 255 76.5
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 9.6e-115 417.2 256 76.2
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 9.6e-115 417.2 256 75.8
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 1.3e-114 416.8 277 73.6
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 1.6e-114 416.4 249 76.7
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 2.1e-114 416.0 262 74.8
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 2.8e-114 415.6 262 74.0
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 3.7e-114 415.2 260 75.0
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 4.8e-114 414.8 257 75.1
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 8.1e-114 414.1 273 73.3
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 1.8e-113 412.9 262 73.7
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 5.3e-113 411.4 261 73.2
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 6.9e-113 411.0 261 74.3
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 1.2e-112 410.2 261 72.4
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 1.2e-112 410.2 262 72.9
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 1.5e-112 409.8 262 73.7
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 2.6e-112 409.1 256 74.6
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 5.8e-112 407.9 262 74.0
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 7.6e-112 407.5 255 74.5
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 9.9e-112 407.1 260 71.5
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 1.3e-111 406.8 262 72.5
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 1.7e-111 406.4 264 72.7
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 1.7e-111 406.4 260 72.3
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.2e-111 406.0 256 73.8
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.9e-111 405.6 256 73.4
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 3.8e-111 405.2 271 70.1
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 4.9e-111 404.8 256 74.2
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 6.4e-111 404.4 260 72.3
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 8.4e-111 404.1 257 75.9
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 1.9e-110 402.9 255 74.5
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 1.2e-109 400.2 249 73.5
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 2.1e-109 399.4 262 72.5
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.0e-108 397.1 263 70.0
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 2.3e-108 396.0 264 71.6
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 1.5e-107 393.3 307 62.9
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 2.5e-107 392.5 264 69.7
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 5.6e-107 391.3 258 72.9
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 7.4e-107 391.0 261 67.8
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 7.4e-107 391.0 261 68.2
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 9.6e-107 390.6 256 69.1
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 1.3e-106 390.2 262 69.5
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 2.1e-106 389.4 256 68.4
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 4.8e-106 388.3 260 67.7
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 1.1e-105 387.1 256 67.6
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 2.4e-105 386.0 251 72.5
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 5.3e-105 384.8 253 70.4
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 6.9e-105 384.4 256 67.2
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 1.2e-104 383.6 249 70.7
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 1.3e-103 380.2 286 62.6
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 1.3e-103 380.2 251 71.7
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 1.4e-102 376.7 258 70.5
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 2.5e-102 375.9 263 69.6
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 3.2e-102 375.6 254 66.9
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 1.2e-101 373.6 259 67.2
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 3.5e-101 372.1 267 65.5
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 3.5e-101 372.1 255 67.5
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 3.5e-101 372.1 252 66.3
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 1.8e-100 369.8 258 66.7
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 1.8e-100 369.8 258 66.7
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 3.9e-100 368.6 259 67.2
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 3.9e-100 368.6 259 67.2
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 8.7e-100 367.5 251 66.9
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 4.3e-99 365.2 263 65.8
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 3.7e-98 362.1 226 74.3
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 3.1e-97 359.0 263 65.8
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 2.6e-96 355.9 255 67.1
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 2.9e-95 352.4 249 65.1
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 5.5e-94 348.2 262 64.9
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 1.8e-89 333.2 264 62.1
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 2.4e-89 332.8 264 59.5
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 5.3e-89 331.6 252 63.5
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 2.9e-87 325.9 221 69.7
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 1.4e-84 317.0 309 54.7
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 4.2e-78 295.4 172 77.9
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 2.7e-77 292.7 272 57.7
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 3.7e-74 282.3 250 52.8
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 6.3e-74 281.6 185 75.1
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 6.3e-74 281.6 182 72.5
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 1.8e-73 280.0 178 76.4
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 2.4e-73 279.6 178 74.2
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 1.5e-70 270.4 258 55.0
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 9.7e-67 257.7 149 81.2
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 3.7e-66 255.8 159 76.1
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 5.3e-65 251.9 191 59.7
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 6.5e-63 245.0 254 51.6
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 4.2e-62 242.3 151 74.8
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.2e-56 224.2 152 67.8
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 2.0e-56 223.4 167 61.7
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 2.5e-54 216.5 224 52.7
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 1.5e-51 207.2 181 59.1
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 1.4e-49 200.7 248 43.5
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 5.0e-47 192.2 257 42.4
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 6.8e-44 181.8 113 72.6
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 1.1e-41 174.5 91 89.0
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 3.5e-32 142.9 281 32.4
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 7.8e-32 141.7 87 69.0
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 3.0e-31 139.8 119 58.8
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 1.6e-29 134.0 84 66.7
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 4.0e-28 129.4 300 34.7
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 7.6e-27 125.2 135 45.9
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 6.6e-23 112.1 116 55.2
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 7.3e-22 108.6 77 64.9
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 9.6e-22 108.2 147 44.9
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 1.7e-18 97.4 84 51.2
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 2.6e-11 73.6 60 55.0
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 1.9e-09 67.4 47 61.7
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 6.6e-07 58.9 49 57.1
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 1.1e-06 58.2 56 53.6


User provided reference genes

Program Settings