Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K02061 Eucalyptus grandis HOM05D005512 ORTHO05D006716 3.6e-116 421.8 241 100.0
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 6.1e-23 112.1 177 42.9
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 1.4e-22 110.9 183 46.4
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 3.9e-22 109.4 177 45.2
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 3.9e-22 109.4 181 46.4
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 5.2e-22 109.0 177 45.2
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 5.2e-22 109.0 178 45.5
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 6.7e-22 108.6 178 45.5
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 8.8e-22 108.2 178 45.5
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 8.8e-22 108.2 178 45.5
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.5e-21 107.5 177 45.2
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.5e-21 107.5 177 45.2
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 4.4e-21 105.9 188 45.2
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 9.7e-21 104.8 183 45.9
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 2.8e-20 103.2 183 44.8
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 2.8e-20 103.2 178 44.4
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 2.8e-20 103.2 176 45.5
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 4.8e-20 102.4 169 45.6
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 1.8e-19 100.5 170 45.3
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 3.1e-19 99.8 169 45.6
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.2e-18 97.8 177 42.9
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 1.3e-17 94.4 171 45.0
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 1.3e-17 94.4 189 42.9
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 2.2e-17 93.6 178 43.3
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 2.9e-17 93.2 192 42.2
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 8.5e-17 91.7 178 42.7
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 4.2e-16 89.4 172 43.0
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 5.5e-16 89.0 181 40.9
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 7.2e-16 88.6 172 45.9
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 9.4e-16 88.2 158 43.0
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 6.1e-15 85.5 171 43.9
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 1.0e-14 84.7 174 43.1
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 1.8e-14 84.0 162 42.6
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 4.0e-14 82.8 172 41.3
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 6.7e-14 82.0 172 42.4
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 8.8e-14 81.6 167 43.1
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 1.2e-13 81.3 194 43.3
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 2.0e-13 80.5 165 43.6
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 2.0e-13 80.5 173 42.8
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 2.6e-13 80.1 198 38.9
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 1.7e-12 77.4 162 40.1
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 6.3e-12 75.5 164 39.6
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 6.3e-12 75.5 164 39.6
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 8.2e-12 75.1 201 37.3
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 2.4e-11 73.6 164 40.9
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 2.4e-11 73.6 82 57.3
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 2.4e-11 73.6 178 40.4
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 5.3e-11 72.4 86 54.7
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 9.1e-11 71.6 163 39.9
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 2.0e-10 70.5 170 38.8
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 4.5e-10 69.3 69 60.9
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 4.5e-10 69.3 163 41.1
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea HOM05D005512 ORTHO05D006716 5.9e-10 68.9 184 37.5
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 1.0e-09 68.2 171 39.8
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 1.3e-09 67.8 186 37.1
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 1.3e-09 67.8 177 39.0
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 1.7e-09 67.4 86 51.2
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 2.2e-09 67.0 254 31.5
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 1.5e-08 64.3 177 40.7
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 1.9e-08 63.9 179 35.2
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 1.9e-08 63.9 55 61.8
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 1.9e-08 63.9 169 38.5
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 3.2e-08 63.2 177 36.7
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 4.2e-08 62.8 173 36.4
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 7.2e-08 62.0 167 38.3
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 1.6e-07 60.8 202 34.7
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 2.1e-07 60.5 79 51.9
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 2.1e-07 60.5 73 54.8
ATR0820G116 Amborella trichopoda HOM05D005512 ORTHO05D006716 3.6e-07 59.7 172 36.6
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 4.7e-07 59.3 168 36.9
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 6.1e-07 58.9 180 37.2
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 1.8e-06 57.4 181 35.9
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 2.3e-06 57.0 63 57.1
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 3.0e-06 56.6 178 33.1
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 3.0e-06 56.6 180 36.1
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 5.2e-06 55.8 164 36.6


User provided reference genes

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