Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K02033 Eucalyptus grandis HOM05D002916 ORTHO05D003152 9.2e-93 343.6 179 100.0
COL.COLO4_29727 Corchorus olitorius HOM05D002916 ORTHO05D003152 1.5e-34 150.2 179 50.3
Atru.chr8.1530 Acer truncatum HOM05D002916 ORTHO05D003152 1.7e-33 146.7 179 49.7
Atru.chr8.1528 Acer truncatum HOM05D002916 ORTHO05D003152 2.2e-33 146.4 179 49.2
Cpa.g.sc5.15 Carica papaya HOM05D002916 ORTHO05D003152 2.2e-33 146.4 180 49.4
Rhsim03G0074900 Rhododendron simsii HOM05D002916 ORTHO05D003152 2.2e-33 146.4 177 47.5
Haze_16636 Corylus avellana HOM05D002916 ORTHO05D003152 1.1e-32 144.1 179 49.2
Haze_16634 Corylus avellana HOM05D002916 ORTHO05D003152 2.4e-32 142.9 179 48.6
Duzib093G0112 Durio zibethinus HOM05D002916 ORTHO05D003152 2.4e-32 142.9 179 49.7
Gorai.002G239800 Gossypium raimondii HOM05D002916 ORTHO05D003152 2.4e-32 142.9 180 50.0
Lalb_Chr01g0018131 Lupinus albus HOM05D002916 ORTHO05D003152 7.0e-32 141.4 182 45.6
Ciclev10012941m.g Citrus clementina HOM05D002916 ORTHO05D003152 9.1e-32 141.0 179 49.2
Thecc.05G089800 Theobroma cacao HOM05D002916 ORTHO05D003152 1.2e-31 140.6 179 49.2
Gohir.D01G195600 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.5e-31 140.2 182 48.9
Ciclev10013433m.g Citrus clementina HOM05D002916 ORTHO05D003152 7.7e-31 137.9 182 48.9
Cfa001906 Carpinus fangiana HOM05D002916 ORTHO05D003152 1.0e-30 137.5 179 46.9
Gohir.A01G206200 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.7e-30 136.7 179 46.9
Glyma.19G194943 Glycine max HOM05D002916 ORTHO05D003152 2.2e-30 136.3 179 45.8
Prupe.7G109500 Prunus persica HOM05D002916 ORTHO05D003152 2.9e-30 136.0 179 47.5
Gohir.D09G135200 Gossypium hirsutum HOM05D002916 ORTHO05D003152 3.8e-30 135.6 179 46.4
Gorai.006G155100 Gossypium raimondii HOM05D002916 ORTHO05D003152 3.8e-30 135.6 179 46.4
Gohir.A07G134900 Gossypium hirsutum HOM05D002916 ORTHO05D003152 5.0e-30 135.2 179 46.4
MD12G1036700 Malus domestica HOM05D002916 ORTHO05D003152 5.0e-30 135.2 180 46.7
VMungo1383G0514 Vigna mungo HOM05D002916 ORTHO05D003152 1.1e-29 134.0 179 44.1
RcHm_v2.0_Chr3g0473821 Rosa chinensis HOM05D002916 ORTHO05D003152 1.5e-29 133.7 179 46.9
QL05p034193 Quercus lobata HOM05D002916 ORTHO05D003152 1.9e-29 133.3 178 47.2
Phvul.001G190500 Phaseolus vulgaris HOM05D002916 ORTHO05D003152 3.2e-29 132.5 179 45.3
TWI53G0172 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 3.2e-29 132.5 180 46.7
Actinidia05426 Actinidia chinensis HOM05D002916 ORTHO05D003152 7.2e-29 131.3 179 44.7
Duzib128G0442 Durio zibethinus HOM05D002916 ORTHO05D003152 1.2e-28 130.6 179 45.8
Oeu056929.1 Olea europaea HOM05D002916 ORTHO05D003152 1.6e-28 130.2 177 45.2
Potri.006G213100 Populus trichocarpa HOM05D002916 ORTHO05D003152 1.6e-28 130.2 178 46.6
Dinv31688 Davidia involucrata HOM05D004140 ORTHO05D006116 2.1e-28 129.8 176 45.5
Potri.016G079700 Populus trichocarpa HOM05D002916 ORTHO05D003152 2.1e-28 129.8 176 46.0
Glyma.10G072400 Glycine max HOM05D002916 ORTHO05D003152 2.7e-28 129.4 179 42.5
Oeu047865.1 Olea europaea HOM05D002916 ORTHO05D003152 2.7e-28 129.4 179 42.5
CiPaw.01G252200 Carya illinoinensis HOM05D002916 ORTHO05D003152 4.7e-28 128.6 179 46.4
Peaxi162Scf00404g00102 Petunia axillaris HOM05D002916 ORTHO05D003152 4.7e-28 128.6 183 46.4
FAN02G4366 Fragaria x ananassa HOM05D002916 ORTHO05D003152 6.1e-28 128.3 180 46.1
MSTRG.26638 Avicennia marina HOM05D002916 ORTHO05D003152 8.0e-28 127.9 182 46.7
Nn6g34891 Nelumbo nucifera HOM05D002916 ORTHO05D003152 8.0e-28 127.9 177 45.2
Gohir.A11G003500 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.4e-27 127.1 171 45.6
TWI74G0225 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 1.4e-27 127.1 180 45.0
Gohir.A05G000100 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.3e-27 126.3 179 44.7
PGR004G1189 Punica granatum HOM05D002916 ORTHO05D003152 3.0e-27 125.9 179 45.3
Manes.08G025700 Manihot esculenta HOM05D002916 ORTHO05D003152 3.9e-27 125.6 183 43.7
Gohir.A04G062400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 6.7e-27 124.8 179 44.7
Lj1g0017693 Lotus japonicus HOM05D002916 ORTHO05D003152 6.7e-27 124.8 186 43.0
FAN05G4254 Fragaria x ananassa HOM05D002916 ORTHO05D003152 1.1e-26 124.0 183 46.4
Glyma.03G196300 Glycine max HOM05D002916 ORTHO05D003152 1.1e-26 124.0 179 42.5
FAN05G3486 Fragaria x ananassa HOM05D002916 ORTHO05D003152 1.5e-26 123.6 183 46.4
Gohir.D04G099400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.0e-26 123.2 179 44.7
Nn2g14164 Nelumbo nucifera HOM05D002916 ORTHO05D003152 2.0e-26 123.2 176 42.0
Ca_09009_v3 Cicer arietinum L. HOM05D002916 ORTHO05D003152 2.6e-26 122.9 178 42.7
FvH4_6g18810 Fragaria vesca HOM05D002916 ORTHO05D003152 2.6e-26 122.9 180 46.7
FAN14G1204 Fragaria x ananassa HOM05D002916 ORTHO05D003152 2.6e-26 122.9 180 46.7
Gorai.009G402300 Gossypium raimondii HOM05D002916 ORTHO05D003152 2.6e-26 122.9 179 44.7
Sp3g08400 Schrenkiella parvula HOM05D002916 ORTHO05D003152 3.3e-26 122.5 181 39.8
Migut.L01781 Erythranthe guttata HOM05D002916 ORTHO05D003152 4.4e-26 122.1 180 45.0
MD14G1023400 Malus domestica HOM05D002916 ORTHO05D003152 4.4e-26 122.1 179 44.7
Manes.09G055000 Manihot esculenta HOM05D002916 ORTHO05D003152 5.7e-26 121.7 179 44.1
Glyma.13G153800 Glycine max HOM05D002916 ORTHO05D003152 1.3e-25 120.6 177 41.8
Sabra16G0087700 Salix brachista HOM05D002916 ORTHO05D003152 2.8e-25 119.4 176 43.2
Sabra16G0085600 Salix brachista HOM05D002916 ORTHO05D003152 1.1e-24 117.5 176 42.6
Aqoxy4G02773 Aquilegia oxysepala HOM05D002916 ORTHO05D003152 1.4e-24 117.1 176 44.3
AL3G21460 Arabidopsis lyrata HOM05D002916 ORTHO05D003152 1.4e-24 117.1 182 37.4
BcaB04g21229 Brassica carinata HOM05D002916 ORTHO05D003152 1.4e-24 117.1 181 38.1
Thhalv10021626m.g Eutrema salsugineum HOM05D002916 ORTHO05D003152 1.8e-24 116.7 188 37.2
CARHR084600 Cardamine hirsuta HOM05D002916 ORTHO05D003152 2.4e-24 116.3 187 38.0
Sed0018474 Sechium edule HOM05D002916 ORTHO05D003152 2.4e-24 116.3 178 43.3
BolC9t60038H Brassica oleracea HOM05D002916 ORTHO05D003152 3.1e-24 115.9 188 41.0
Gohir.A09G139400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 3.1e-24 115.9 134 50.0
Sabra06G0164100 Salix brachista HOM05D002916 ORTHO05D003152 4.1e-24 115.5 160 46.2
BcaNung05911 Brassica carinata HOM05D002916 ORTHO05D003152 7.0e-24 114.8 181 38.1
PGR142G0380 Punica granatum HOM05D002916 ORTHO05D003152 7.0e-24 114.8 190 38.9
BcaC09g48115 Brassica carinata HOM05D002916 ORTHO05D003152 1.2e-23 114.0 184 38.0
C09p73040 Brassica napus HOM05D002916 ORTHO05D003152 1.2e-23 114.0 188 41.0
BolC1t05420H Brassica oleracea HOM05D002916 ORTHO05D003152 2.0e-23 113.2 184 37.5
BolC5t34456H Brassica oleracea HOM05D002916 ORTHO05D003152 2.6e-23 112.8 176 38.1
Carub.0008s0814 Capsella rubella HOM05D002916 ORTHO05D003152 2.6e-23 112.8 190 34.7
C05p58000 Brassica napus HOM05D002916 ORTHO05D003152 3.5e-23 112.5 179 37.4
DCAR_007755 Daucus carota HOM05D002916 ORTHO05D003152 3.5e-23 112.5 176 40.3
DCAR_009166 Daucus carota HOM05D002916 ORTHO05D003152 3.5e-23 112.5 179 37.4
A10p32230 Brassica napus HOM05D002916 ORTHO05D003152 4.5e-23 112.1 188 40.4
BraA10t45266Z Brassica rapa HOM05D002916 ORTHO05D003152 4.5e-23 112.1 188 40.4
BcaNung06240 Brassica carinata HOM05D002916 ORTHO05D003152 7.7e-23 111.3 179 36.9
MELO3C024547.2 Cucumis melo HOM05D002916 ORTHO05D003152 1.0e-22 110.9 180 41.7
AL6G13470 Arabidopsis lyrata HOM05D002916 ORTHO05D003152 1.3e-22 110.5 189 37.0
AT3G10120 Arabidopsis thaliana HOM05D002916 ORTHO05D003152 1.3e-22 110.5 185 35.7
A05p38970 Brassica napus HOM05D002916 ORTHO05D003152 1.3e-22 110.5 180 38.3
CANSAT64G0492 Cannabis sativa HOM05D002916 ORTHO05D003152 1.3e-22 110.5 202 41.6
BraA05t22688Z Brassica rapa HOM05D002916 ORTHO05D003152 1.7e-22 110.2 180 38.3
ClCG04G010060 Citrullus lanatus HOM05D002916 ORTHO05D003152 2.2e-22 109.8 174 39.7
AUR62006186 Chenopodium quinoa HOM05D002916 ORTHO05D003152 3.8e-22 109.0 180 40.6
Hma1.2p1_0084F.1_g043850 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 5.0e-22 108.6 160 41.9
Hma1.2p1_0820F.1_g223855 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 5.0e-22 108.6 160 41.9
Solyc09g009810.1 Solanum lycopersicum HOM05D002916 ORTHO05D003152 6.5e-22 108.2 201 36.8
AUR62028520 Chenopodium quinoa HOM05D002916 ORTHO05D003152 8.5e-22 107.8 179 39.1
CsaV3_6G040690 Cucumis sativus L. HOM05D002916 ORTHO05D003152 8.5e-22 107.8 183 41.0
PGSC0003DMG400008880 Solanum tuberosum HOM05D002916 ORTHO05D003152 1.5e-21 107.1 204 35.3
A03p01480 Brassica napus HOM05D002916 ORTHO05D003152 2.5e-21 106.3 191 36.6
BraA03t09526Z Brassica rapa HOM05D002916 ORTHO05D003152 2.5e-21 106.3 191 36.6
Cc06_g05820 Coffea canephora HOM05D002916 ORTHO05D003152 3.2e-21 105.9 182 36.3
THA.LOC104816397 Tarenaya hassleriana HOM05D002916 ORTHO05D003152 4.2e-21 105.5 193 35.2
AT5G03890 Arabidopsis thaliana HOM05D002916 ORTHO05D003152 5.5e-21 105.1 189 36.0
CARHR209370 Cardamine hirsuta HOM05D002916 ORTHO05D003152 5.5e-21 105.1 190 38.9
Thhalv10014801m.g Eutrema salsugineum HOM05D002916 ORTHO05D003152 1.6e-20 103.6 191 37.2
DCAR_013390 Daucus carota HOM05D002916 ORTHO05D003152 3.6e-20 102.4 179 38.5
DCAR_013389 Daucus carota HOM05D002916 ORTHO05D003152 4.7e-20 102.1 176 35.8
Ah.15g090860 Amaranthus hybridus HOM05D002916 ORTHO05D003152 6.1e-20 101.7 179 37.4
C03p01810 Brassica napus HOM05D002916 ORTHO05D003152 6.1e-20 101.7 186 36.0
Migut.J01032 Erythranthe guttata HOM05D002916 ORTHO05D003152 6.1e-20 101.7 159 45.3
Actinidia31270 Actinidia chinensis HOM05D002916 ORTHO05D003152 8.0e-20 101.3 171 40.4
Carub.0006s0284 Capsella rubella HOM05D002916 ORTHO05D003152 1.0e-19 100.9 187 36.4
PSO339G4347 Papaver somniferum HOM05D002916 ORTHO05D003152 1.2e-18 97.4 182 37.9
DCAR_013392 Daucus carota HOM05D002916 ORTHO05D003152 1.5e-18 97.1 176 36.9
A01p42040 Brassica napus HOM05D002916 ORTHO05D003152 2.0e-18 96.7 138 40.6
BraA01t04273Z Brassica rapa HOM05D002916 ORTHO05D003152 2.0e-18 96.7 138 40.6
BcaC06g32092 Brassica carinata HOM05D002916 ORTHO05D003152 7.5e-18 94.7 185 37.8
arahy.Tifrunner.gnm1.ann1.1GMW3T Arachis hypogaea HOM05D002916 ORTHO05D003152 2.2e-17 93.2 189 31.2
arahy.Tifrunner.gnm1.ann1.T8X57X Arachis hypogaea HOM05D002916 ORTHO05D003152 2.2e-17 93.2 189 31.2
Nitab4.5_0001712g0010 Nicotiana tabacum HOM05D002916 ORTHO05D003152 2.8e-17 92.8 129 42.6
DCAR_013391 Daucus carota HOM05D002916 ORTHO05D003152 4.8e-17 92.0 178 36.5
BolC3t12736H Brassica oleracea HOM05D002916 ORTHO05D003152 1.4e-16 90.5 141 39.0
Lsat_1_v5_gn_5_164861 Lactuca sativa HOM05D002916 ORTHO05D003152 4.1e-16 89.0 177 35.0
Prupe.2G317800 Prunus persica HOM05D002916 ORTHO05D003152 5.4e-16 88.6 179 35.8
Sp6g38840 Schrenkiella parvula HOM05D002916 ORTHO05D003152 7.7e-15 84.7 186 35.5
ATR0078G023 Amborella trichopoda HOM05D002916 ORTHO05D003152 2.2e-14 83.2 188 37.2
Aa31LG3G2650 Aethionema arabicum HOM05D002916 ORTHO05D003152 3.8e-14 82.4 168 35.1
THA.LOC104826943 Tarenaya hassleriana HOM05D002916 ORTHO05D003152 3.8e-14 82.4 134 37.3
BcaB01g05762 Brassica carinata HOM05D002916 ORTHO05D003152 1.1e-13 80.9 176 34.1
SGA_v2.0_scaffold184G39965 Striga asiatica HOM05D002916 ORTHO05D003152 1.5e-13 80.5 127 40.9
Medtr7g104680 Medicago truncatula HOM05D002916 ORTHO05D003152 4.2e-13 79.0 183 36.6
TPR.G23310 Trifolium pratense HOM05D002916 ORTHO05D003152 1.2e-12 77.4 181 33.7
PSO384G2526 Papaver somniferum HOM05D002916 ORTHO05D003152 3.6e-12 75.9 180 34.4
SEGI_19412 Sequoiadendron giganteum HOM05D002916 ORTHO05D003152 6.1e-12 75.1 190 33.7
Rhsim03G0214600 Rhododendron simsii HOM05D001023 ORTHO05D000912 1.8e-11 73.6 184 35.3
Gohir.D12G247400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 3.0e-11 72.8 187 33.2
Nitab4.5_0003610g0010 Nicotiana tabacum HOM05D002916 ORTHO05D003152 3.0e-11 72.8 179 33.0
Sabra12G0011500 Salix brachista HOM05D002916 ORTHO05D003152 4.0e-11 72.4 181 32.6
Nitab4.5_0000794g0180 Nicotiana tabacum HOM05D002916 ORTHO05D003152 5.2e-11 72.0 60 55.0
SalBow4G3036 Salvia bowleyana HOM05D002916 ORTHO05D003152 5.2e-11 72.0 114 43.9
Gorai.008G265400 Gossypium raimondii HOM05D002916 ORTHO05D003152 1.5e-10 70.5 172 33.7
QL09p007312 Quercus lobata HOM05D002916 ORTHO05D003152 1.5e-10 70.5 186 32.8
Potri.012G022300 Populus trichocarpa HOM05D002916 ORTHO05D003152 2.0e-10 70.1 181 31.5
DCAR_020363 Daucus carota HOM05D002916 ORTHO05D003152 3.4e-10 69.3 193 31.1
TAR623G0367 Trochodendron aralioides HOM05D002916 ORTHO05D003152 3.4e-10 69.3 140 38.6
SEGI_19965 Sequoiadendron giganteum HOM05D002916 ORTHO05D003152 4.4e-10 68.9 190 29.5
COL.COLO4_14359 Corchorus olitorius HOM05D002916 ORTHO05D003152 1.3e-09 67.4 194 34.5
DCAR_008976 Daucus carota HOM05D002916 ORTHO05D003152 1.3e-09 67.4 192 28.6
Gohir.A12G246700 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.7e-09 67.0 187 32.6
Nitab4.5_0009023g0020 Nicotiana tabacum HOM05D002916 ORTHO05D003152 2.2e-09 66.6 162 34.0
CSS0010688 Camellia sinensis var. sinensis HOM05D002916 ORTHO05D003152 2.8e-09 66.2 127 44.9
Cfa016172 Carpinus fangiana HOM05D002916 ORTHO05D003152 2.8e-09 66.2 168 31.5
Sopen09g004570 Solanum pennellii HOM05D002916 ORTHO05D003152 3.7e-09 65.9 186 29.6
Haze_00282 Corylus avellana HOM05D002916 ORTHO05D003152 8.3e-09 64.7 168 31.5
Manes.01G042300 Manihot esculenta HOM05D002916 ORTHO05D003152 1.1e-08 64.3 163 34.4
Thecc.03G207400 Theobroma cacao HOM05D002916 ORTHO05D003152 1.1e-08 64.3 182 31.9
SEGI_21454 Sequoiadendron giganteum HOM05D001984 ORTHO05D002057 1.4e-08 63.9 190 28.9
Phvul.009G046400 Phaseolus vulgaris HOM05D002916 ORTHO05D003152 2.4e-08 63.2 191 28.8
Medtr3g092470 Medicago truncatula HOM05D002916 ORTHO05D003152 3.1e-08 62.8 183 30.6
PSO478G4153 Papaver somniferum HOM05D002916 ORTHO05D003152 5.4e-08 62.0 172 28.5
Dinv29219 Davidia involucrata HOM05D002916 ORTHO05D003152 7.0e-08 61.6 180 31.7
Potri.015G005700 Populus trichocarpa HOM05D002916 ORTHO05D003152 7.0e-08 61.6 180 28.9
Duzib084G1372 Durio zibethinus HOM05D002916 ORTHO05D003152 9.1e-08 61.2 174 31.6
Hma1.2p1_0094F.1_g047290 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 9.1e-08 61.2 193 27.5
QL02p027552 Quercus lobata HOM05D002916 ORTHO05D003152 9.1e-08 61.2 165 28.5
SGA_v2.0_scaffold35G14068 Striga asiatica HOM05D002916 ORTHO05D003152 9.1e-08 61.2 109 38.5
Atru.chr12.2401 Acer truncatum HOM05D002916 ORTHO05D003152 1.2e-07 60.8 169 32.0
Ciclev10022281m.g Citrus clementina HOM05D002255 ORTHO05D002288 1.2e-07 60.8 197 27.9
Manes.12G116500 Manihot esculenta HOM05D002916 ORTHO05D003152 1.2e-07 60.8 169 30.2
ECA236G4089 Erigeron canadensis HOM05D002916 ORTHO05D003152 1.6e-07 60.5 181 33.1
Psat5g073040 Pisum sativum HOM05D002916 ORTHO05D003152 1.6e-07 60.5 191 28.3
CANSAT21G0001 Cannabis sativa HOM05D002916 ORTHO05D003152 2.0e-07 60.1 176 30.1
Glyma.04G229700 Glycine max HOM05D002916 ORTHO05D003152 2.0e-07 60.1 165 27.9
Glyma.06G135000 Glycine max HOM05D002916 ORTHO05D003152 2.0e-07 60.1 177 26.6
MELO3C005922.2 Cucumis melo HOM05D002916 ORTHO05D003152 3.5e-07 59.3 171 31.6
Nn3g18859 Nelumbo nucifera HOM05D002916 ORTHO05D003152 4.5e-07 58.9 171 31.0
TAR636G0145 Trochodendron aralioides HOM05D002916 ORTHO05D003152 7.7e-07 58.2 192 29.2
PGR042G3508 Punica granatum HOM05D002916 ORTHO05D003152 1.3e-06 57.4 181 32.0
Cpa.g.sc141.2 Carica papaya HOM05D002255 ORTHO05D002288 2.3e-06 56.6 138 31.2
CsaV3_5G000050 Cucumis sativus L. HOM05D002916 ORTHO05D003152 2.3e-06 56.6 171 31.6
ClCG01G000110 Citrullus lanatus HOM05D002916 ORTHO05D003152 2.9e-06 56.2 172 28.5
Sed0016396 Sechium edule HOM05D002916 ORTHO05D003152 2.9e-06 56.2 169 31.4
TWI14G0548 Tripterygium wilfordii HOM05D002255 ORTHO05D002288 2.9e-06 56.2 189 28.6
Eucgr.A02661 Eucalyptus grandis HOM05D002916 ORTHO05D003152 8.6e-06 54.7 179 30.7
Glyma.07G050100 Glycine max HOM05D002255 ORTHO05D002288 8.6e-06 54.7 150 29.3


User provided reference genes

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