Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 1.2e-128 463.4 265 100.0
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 1.1e-81 307.4 251 68.5
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 3.2e-81 305.8 268 63.1
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 3.2e-81 305.8 267 68.9
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 9.2e-81 304.3 259 67.2
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 2.0e-80 303.1 251 68.1
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 2.0e-80 303.1 258 67.8
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 1.0e-79 300.8 251 70.9
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 1.3e-79 300.4 269 66.5
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 6.6e-79 298.1 265 65.3
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.9e-78 296.6 254 69.3
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 3.3e-78 295.8 251 70.5
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 5.6e-78 295.0 254 68.9
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 5.6e-78 295.0 249 69.5
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 5.6e-78 295.0 269 66.9
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 5.6e-78 295.0 266 60.9
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 7.3e-78 294.7 265 64.2
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 7.3e-78 294.7 247 68.0
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 7.3e-78 294.7 254 68.9
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.1e-77 293.1 249 69.5
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 1.1e-76 290.8 269 66.9
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 1.4e-76 290.4 251 70.5
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 2.3e-76 289.7 265 66.0
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 6.8e-76 288.1 249 67.1
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 8.9e-76 287.7 265 67.2
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 1.5e-75 287.0 249 67.1
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 1.5e-75 287.0 258 66.3
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 3.4e-75 285.8 266 67.7
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 7.5e-75 284.6 245 64.9
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 9.8e-75 284.3 249 69.1
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 1.7e-74 283.5 270 63.7
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 4.9e-74 282.0 269 63.2
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 6.4e-74 281.6 269 67.3
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 1.9e-73 280.0 249 66.7
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 1.9e-73 280.0 268 66.4
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 3.2e-73 279.3 251 64.5
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 1.6e-72 276.9 265 66.0
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 1.6e-72 276.9 265 66.4
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 2.7e-72 276.2 265 65.7
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 5.1e-71 271.9 265 62.3
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 8.6e-71 271.2 249 66.3
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 3.3e-70 269.2 255 62.7
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 3.3e-70 269.2 254 61.8
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 7.3e-70 268.1 270 61.9
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 1.2e-69 267.3 270 63.3
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.6e-69 266.9 266 58.6
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 1.6e-69 266.9 261 63.6
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 6.2e-69 265.0 269 58.7
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 1.1e-68 264.2 270 62.6
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 1.1e-68 264.2 249 64.7
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 1.4e-68 263.8 253 64.4
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 6.8e-68 261.5 272 61.0
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 1.5e-67 260.4 250 64.0
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.5e-67 260.4 224 65.2
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 3.4e-67 259.2 267 58.4
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 4.4e-67 258.8 246 60.6
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 5.8e-67 258.5 262 63.0
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 1.3e-66 257.3 252 63.5
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 1.7e-66 256.9 273 60.8
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 1.7e-66 256.9 252 63.5
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 2.2e-66 256.5 274 59.5
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.2e-66 256.5 267 61.4
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 2.9e-66 256.1 273 60.4
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 4.9e-66 255.4 263 61.2
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 6.4e-66 255.0 262 61.5
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 2.4e-65 253.1 236 65.7
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 5.4e-65 251.9 247 64.0
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 2.1e-64 250.0 249 61.4
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 2.1e-64 250.0 249 65.5
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 5.1e-63 245.4 286 53.8
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 1.5e-62 243.8 274 59.9
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 1.5e-62 243.8 249 62.2
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 7.3e-62 241.5 253 58.9
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 1.6e-61 240.4 197 65.5
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 2.1e-61 240.0 186 69.4
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 1.1e-60 237.7 274 49.6
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 1.8e-60 236.9 247 56.3
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 1.8e-60 236.9 202 64.4
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.4e-59 232.6 266 57.9
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 5.8e-59 231.9 249 59.8
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 3.8e-58 229.2 261 56.3
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 3.2e-57 226.1 251 55.8
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 1.6e-56 223.8 234 60.7
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 2.1e-56 223.4 254 53.5
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 3.0e-55 219.5 251 57.0
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 2.1e-53 213.4 245 50.6
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 2.8e-53 213.0 221 61.5
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 6.2e-53 211.8 250 57.2
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 1.1e-52 211.1 188 61.2
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 1.1e-52 211.1 256 55.1
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 2.4e-52 209.9 240 54.6
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 4.0e-52 209.1 205 61.0
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 6.9e-52 208.4 249 51.8
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 4.9e-50 202.2 250 53.6
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 8.4e-50 201.4 248 56.5
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 1.9e-49 200.3 249 55.0
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 3.5e-48 196.1 267 44.6
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 3.5e-48 196.1 158 69.0
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 3.2e-41 172.9 257 42.4
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 2.1e-40 170.2 251 49.8
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 3.5e-40 169.5 257 42.0
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 5.1e-39 165.6 157 63.1
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 2.8e-37 159.8 260 37.7
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 4.8e-37 159.1 129 65.9
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 2.9e-34 149.8 272 41.9
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 7.1e-33 145.2 154 53.9
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.1e-30 137.9 164 57.9
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.8e-29 132.5 93 75.3
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.8e-29 132.5 93 75.3
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 1.7e-26 124.0 255 35.3
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 3.9e-23 112.8 241 41.5
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 9.7e-22 108.2 224 39.7
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 1.1e-20 104.8 123 48.8
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 2.4e-20 103.6 162 43.2
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 9.4e-17 91.7 163 37.4
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 8.8e-15 85.1 200 32.0
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 1.2e-08 64.7 98 41.8
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 3.9e-07 59.7 83 41.0
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 5.1e-07 59.3 38 65.8
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 5.1e-07 59.3 56 53.6
HPP92_003487 Vanilla planifolia HOM05D006753 ORTHO05D008521 2.6e-06 57.0 69 39.1
HPP92_026885 Vanilla planifolia HOM05D006753 ORTHO05D008521 2.6e-06 57.0 69 39.1
Oeu006328.1 Olea europaea HOM05D006753 ORTHO05D008521 7.4e-06 55.5 96 36.5


User provided reference genes

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