Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 1.1e-214 749.6 361 100.0
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 1.9e-198 695.7 361 90.3
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 1.1e-196 689.9 361 90.3
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.8e-196 689.1 361 89.5
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 2.4e-196 688.7 361 89.8
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 6.9e-196 687.2 361 90.3
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 6.9e-196 687.2 361 89.8
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 9.0e-196 686.8 361 90.0
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 2.0e-195 685.6 361 88.9
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 8.4e-194 680.2 361 88.4
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 8.4e-194 680.2 361 89.5
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 1.1e-193 679.9 361 89.5
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 1.4e-193 679.5 359 89.4
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 1.4e-193 679.5 357 89.4
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 4.2e-193 677.9 361 88.9
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.6e-192 676.0 361 88.1
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 4.6e-192 674.5 359 87.7
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 4.6e-192 674.5 361 87.3
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 6.0e-192 674.1 361 88.1
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 1.3e-191 672.9 359 87.7
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 2.3e-191 672.2 361 87.3
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 3.0e-191 671.8 361 87.3
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 3.0e-191 671.8 361 87.3
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 3.9e-191 671.4 361 88.1
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 8.7e-191 670.2 356 88.8
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 1.1e-190 669.8 361 88.6
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 1.9e-190 669.1 356 88.5
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 4.3e-190 667.9 361 87.0
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 5.6e-190 667.5 359 87.7
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 1.6e-189 666.0 361 85.9
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 2.1e-189 665.6 361 87.3
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 2.8e-189 665.2 358 87.4
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 6.2e-189 664.1 362 86.5
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 8.1e-189 663.7 361 87.0
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 1.8e-188 662.5 361 87.0
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 3.1e-188 661.8 361 86.1
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 4.0e-188 661.4 361 85.9
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 1.2e-187 659.8 360 86.9
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 1.2e-187 659.8 358 85.8
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 1.2e-187 659.8 361 85.3
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 2.6e-187 658.7 360 86.1
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 2.6e-187 658.7 360 86.1
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 2.6e-187 658.7 361 84.5
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 3.4e-187 658.3 357 87.4
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 4.5e-187 657.9 360 85.8
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 5.8e-187 657.5 361 85.9
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 1.3e-186 656.4 361 86.1
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 3.8e-186 654.8 360 85.6
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 4.9e-186 654.4 361 85.0
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 6.4e-186 654.1 359 85.0
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 6.4e-186 654.1 371 84.6
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 1.1e-185 653.3 396 80.1
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 1.4e-185 652.9 361 83.9
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 2.4e-185 652.1 360 85.3
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 4.2e-185 651.4 361 84.5
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 4.2e-185 651.4 361 85.0
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 9.3e-185 650.2 361 83.7
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 1.6e-184 649.4 359 83.8
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 5.1e-183 644.4 387 79.8
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 1.1e-182 643.3 359 83.8
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 1.5e-182 642.9 359 83.6
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 1.5e-182 642.9 359 83.6
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 1.9e-182 642.5 359 83.8
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 5.6e-182 641.0 417 75.5
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 1.3e-181 639.8 361 82.5
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 6.2e-181 637.5 360 82.5
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.4e-180 636.3 401 76.1
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 1.8e-180 636.0 361 82.5
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 2.4e-180 635.6 359 83.0
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 9.0e-180 633.6 428 73.4
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 9.0e-180 633.6 339 87.6
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 1.5e-179 632.9 357 83.5
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 2.0e-179 632.5 360 81.7
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 2.0e-179 632.5 361 82.0
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 2.6e-179 632.1 359 82.2
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 2.6e-179 632.1 359 82.2
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 2.6e-179 632.1 359 82.2
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 3.4e-179 631.7 359 81.9
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 1.7e-178 629.4 359 81.6
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 1.7e-178 629.4 357 82.1
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 8.4e-178 627.1 387 77.3
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 8.4e-178 627.1 361 80.9
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 3.5e-176 621.7 358 81.0
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 3.0e-175 618.6 360 81.1
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 1.5e-174 616.3 359 81.1
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 5.7e-174 614.4 359 80.8
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 1.3e-173 613.2 357 81.0
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 4.8e-173 611.3 359 80.2
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 1.4e-172 609.8 361 79.8
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 4.1e-172 608.2 361 79.5
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 6.7e-167 590.9 314 89.5
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 1.9e-166 589.3 357 78.2
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 5.7e-166 587.8 366 72.7
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 5.7e-166 587.8 357 77.3
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 6.3e-165 584.3 366 73.0
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 4.2e-161 571.6 336 80.4
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 6.7e-159 564.3 361 74.8
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 7.4e-158 560.8 302 87.7
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 2.2e-154 549.3 314 83.4
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 5.5e-153 544.7 306 85.3
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 2.9e-146 522.3 357 68.9
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 5.0e-146 521.5 403 65.0
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 2.5e-145 519.2 357 69.7
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 2.7e-144 515.8 357 69.2
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 2.0e-142 509.6 352 72.2
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 5.3e-140 501.5 358 67.0
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 5.4e-132 474.9 365 65.8
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 2.0e-131 473.0 368 62.8
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 1.3e-130 470.3 361 66.2
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 2.2e-130 469.5 252 88.5
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 2.1e-128 463.0 241 92.5
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 3.3e-113 412.5 239 82.8
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 4.9e-109 398.7 211 87.2
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 4.9e-101 372.1 205 85.4
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 9.3e-76 288.1 180 78.9
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 9.9e-70 268.1 152 79.6
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 6.9e-63 245.4 154 74.7
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 2.3e-58 230.3 126 84.1
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 4.3e-57 226.1 119 82.4
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 7.4e-49 198.7 323 39.3
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 5.9e-46 189.1 207 51.2
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 4.5e-38 162.9 98 81.6
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 1.1e-33 148.3 117 66.7
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 1.8e-26 124.4 59 93.2
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 1.4e-23 114.8 111 55.0
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 2.3e-18 97.4 79 64.6
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 2.8e-16 90.5 51 74.5
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 1.6e-14 84.7 37 97.3
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 3.5e-14 83.6 162 36.4
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 6.1e-11 72.8 254 27.2


User provided reference genes

Program Settings