Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K01772 Eucalyptus grandis HOM05D005034 ORTHO05D006234 3.2e-34 147.9 76 100.0
PSO548G0041 Papaver somniferum HOM05D005034 ORTHO05D006234 6.2e-22 107.1 76 77.6
PGR111G0056 Punica granatum HOM05D005034 ORTHO05D006234 2.3e-21 105.1 76 73.7
LjContig00318g0021446 Lotus japonicus HOM05D005034 ORTHO05D006234 2.0e-20 102.1 68 79.4
LjContig00319g0026028 Lotus japonicus HOM05D005034 ORTHO05D006234 2.0e-20 102.1 68 79.4
Gohir.1Z049831 Gossypium hirsutum HOM05D005034 ORTHO05D006234 3.4e-20 101.3 69 76.8
Gohir.A02G134200 Gossypium hirsutum HOM05D005034 ORTHO05D006234 3.4e-20 101.3 69 76.8
Gohir.D03G077700 Gossypium hirsutum HOM05D005034 ORTHO05D006234 7.5e-20 100.1 69 75.4
Gohir.A10G117233 Gossypium hirsutum HOM05D005034 ORTHO05D006234 9.9e-20 99.8 69 75.4
Nn064s42213 Nelumbo nucifera HOM05D005034 ORTHO05D006234 9.9e-20 99.8 73 71.2
Nn212s45210 Nelumbo nucifera HOM05D005034 ORTHO05D006234 9.9e-20 99.8 73 71.2
MBI10_g47592_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 1.3e-19 99.4 69 76.8
CAN.G1045.13 Capsicum annuum HOM05D005034 ORTHO05D006234 1.7e-19 99.0 76 68.4
CAN.G134.8 Capsicum annuum HOM05D005034 ORTHO05D006234 1.7e-19 99.0 76 68.4
CAN.G1526.4 Capsicum annuum HOM05D005034 ORTHO05D006234 1.7e-19 99.0 76 68.4
CAN.G278.5 Capsicum annuum HOM05D005034 ORTHO05D006234 1.7e-19 99.0 76 68.4
CSS0025903 Camellia sinensis var. sinensis HOM05D005034 ORTHO05D006234 2.2e-19 98.6 74 70.3
DCAR_032535 Daucus carota HOM05D005034 ORTHO05D006234 2.9e-19 98.2 69 76.8
Nitab4.5_0001130g0160 Nicotiana tabacum HOM05D005034 ORTHO05D006234 4.9e-19 97.4 68 75.0
Medtr4g006130 Medicago truncatula HOM05D005034 ORTHO05D006234 6.4e-19 97.1 58 86.2
arahy.Tifrunner.gnm1.ann1.ZFUC3L Arachis hypogaea HOM05D005034 ORTHO05D006234 8.3e-19 96.7 82 65.9
BolSC29t60503H Brassica oleracea HOM05D005034 ORTHO05D006234 1.1e-18 96.3 76 69.7
BolSC29t60543H Brassica oleracea HOM05D005034 ORTHO05D006234 1.1e-18 96.3 76 69.7
BolSC35t60695H Brassica oleracea HOM05D005034 ORTHO05D006234 1.1e-18 96.3 76 69.7
BolSC35t60701H Brassica oleracea HOM05D005034 ORTHO05D006234 1.1e-18 96.3 76 69.7
BolSC37t60790H Brassica oleracea HOM05D005034 ORTHO05D006234 1.1e-18 96.3 76 69.7
BolSC46t60961H Brassica oleracea HOM05D005034 ORTHO05D006234 1.1e-18 96.3 76 69.7
BolSC47t61067H Brassica oleracea HOM05D005034 ORTHO05D006234 1.1e-18 96.3 76 69.7
BolSC49t61140H Brassica oleracea HOM05D005034 ORTHO05D006234 1.1e-18 96.3 76 69.7
BraSC103t45426Z Brassica rapa HOM05D005034 ORTHO05D006234 1.1e-18 96.3 76 69.7
BraSC138t45537Z Brassica rapa HOM05D005034 ORTHO05D006234 1.1e-18 96.3 76 69.7
BraSC143t45663Z Brassica rapa HOM05D005034 ORTHO05D006234 1.1e-18 96.3 76 69.7
BraSC179t45777Z Brassica rapa HOM05D005034 ORTHO05D006234 1.1e-18 96.3 76 69.7
BraSC25t45907Z Brassica rapa HOM05D005034 ORTHO05D006234 1.1e-18 96.3 76 69.7
BraSC59t46548Z Brassica rapa HOM05D005034 ORTHO05D006234 1.1e-18 96.3 76 69.7
Solyc00g500085.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 1.1e-18 96.3 73 69.9
Potri.001G342966 Populus trichocarpa HOM05D005034 ORTHO05D006234 1.4e-18 95.9 68 73.5
Peaxi162Scf01164g00036 Petunia axillaris HOM05D005034 ORTHO05D006234 1.9e-18 95.5 76 65.8
SalBow1G5942 Salvia bowleyana HOM05D005034 ORTHO05D006234 1.9e-18 95.5 73 69.9
Sed0013321 Sechium edule HOM05D005034 ORTHO05D006234 1.9e-18 95.5 75 66.7
CAN.G413.9 Capsicum annuum HOM05D005034 ORTHO05D006234 2.4e-18 95.1 76 65.8
Lalb_Chr07g0191731 Lupinus albus HOM05D005034 ORTHO05D006234 2.4e-18 95.1 58 82.8
ATCG01040 Arabidopsis thaliana HOM05D005034 ORTHO05D006234 3.2e-18 94.7 73 71.2
C07p33420 Brassica napus HOM05D005034 ORTHO05D006234 3.2e-18 94.7 73 71.2
C09p40380 Brassica napus HOM05D005034 ORTHO05D006234 3.2e-18 94.7 73 71.2
arahy.Tifrunner.gnm1.ann1.4P2RM7 Arachis hypogaea HOM05D005034 ORTHO05D006234 4.1e-18 94.4 56 85.7
Lj2P1238T83 Lonicera japonica HOM05D005034 ORTHO05D006234 5.4e-18 94.0 72 69.4
arahy.Tifrunner.gnm1.ann1.RW0ZF5 Arachis hypogaea HOM05D005034 ORTHO05D006234 7.1e-18 93.6 55 85.5
BolC9t56928H Brassica oleracea HOM05D005034 ORTHO05D006234 1.6e-17 92.4 76 68.4
Lj9P89T19 Lonicera japonica HOM05D005034 ORTHO05D006234 1.6e-17 92.4 64 75.0
MBI10_g47591_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 1.6e-17 92.4 54 85.2
Oeu010692.1 Olea europaea HOM05D005034 ORTHO05D006234 2.7e-17 91.7 51 86.3
Sed0020615 Sechium edule HOM05D005034 ORTHO05D006234 3.5e-17 91.3 77 64.9
Nitab4.5_0001446g0070 Nicotiana tabacum HOM05D005034 ORTHO05D006234 1.0e-16 89.7 60 75.0
HanXRQChr02g0059701 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-16 89.0 76 64.5
HanXRQChr05g0152421 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-16 89.0 76 64.5
HanXRQChr06g0182991 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-16 89.0 76 64.5
HanXRQChr09g0251521 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-16 89.0 76 64.5
HanXRQChr11g0323731 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-16 89.0 76 64.5
HanXRQChr13g0413491 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-16 89.0 76 64.5
HanXRQCPg0580361 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-16 89.0 76 64.5
Lalb_Chr23g0274781 Lupinus albus HOM05D005034 ORTHO05D006234 1.7e-16 89.0 62 72.6
CAN.G8.23 Capsicum annuum HOM05D005034 ORTHO05D006234 3.9e-16 87.8 76 61.8
HanXRQChr00c0690g0576751 Helianthus annuus HOM05D005034 ORTHO05D006234 5.1e-16 87.4 60 75.0
HanXRQChr01g0020091 Helianthus annuus HOM05D005034 ORTHO05D006234 5.1e-16 87.4 60 75.0
Lalb_Chr18g0049451 Lupinus albus HOM05D005034 ORTHO05D006234 1.1e-13 79.7 58 69.0
Sed0006489 Sechium edule HOM05D005034 ORTHO05D006234 2.4e-13 78.6 65 63.1
RcHm_v2.0_CPg0502821 Rosa chinensis HOM05D005034 ORTHO05D006234 1.5e-12 75.9 47 80.9
HanXRQChr17g0557781 Helianthus annuus HOM05D005034 ORTHO05D006234 5.8e-12 73.9 54 68.5
GSVIVG01004975001 Vitis vinifera HOM05D005034 ORTHO05D006234 7.6e-12 73.6 56 66.1
BolSC45t60912H Brassica oleracea HOM05D005034 ORTHO05D006234 8.4e-11 70.1 56 69.6
Solyc11g021210.2 Solanum lycopersicum HOM05D005034 ORTHO05D006234 1.1e-10 69.7 76 51.3
Pp3c2_30980 Physcomitrium patens HOM05D005034 ORTHO05D006234 2.4e-10 68.6 69 52.2
Migut.D01256 Erythranthe guttata HOM05D005034 ORTHO05D006234 3.2e-10 68.2 42 78.6
Medtr4g050940 Medicago truncatula HOM05D001243 ORTHO05D000843 3.2e-10 68.2 38 86.8
arahy.Tifrunner.gnm1.ann1.5N7P5J Arachis hypogaea HOM05D005034 ORTHO05D006234 9.2e-10 66.6 42 81.0
Gohir.D01G134300 Gossypium hirsutum HOM05D005034 ORTHO05D006234 9.2e-10 66.6 41 78.0
Ciclev10013963m.g Citrus clementina HOM05D005034 ORTHO05D006234 1.6e-09 65.9 40 77.5
Gorai.002G058800 Gossypium raimondii HOM05D005034 ORTHO05D006234 4.6e-09 64.3 59 57.6
Solyc00g500194.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 1.0e-08 63.2 40 72.5
Gohir.D03G074401 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.7e-08 62.4 66 56.1
Nitab4.5_0007979g0110 Nicotiana tabacum HOM05D005034 ORTHO05D006234 5.1e-08 60.8 43 74.4
CARHR178440 Cardamine hirsuta HOM05D005034 ORTHO05D006234 1.1e-07 59.7 35 85.7
Ciclev10010882m.g Citrus clementina HOM05D005034 ORTHO05D006234 7.3e-07 57.0 35 74.3
Ciclev10018423m.g Citrus clementina HOM05D005034 ORTHO05D006234 7.3e-07 57.0 35 74.3
Ciclev10027633m.g Citrus clementina HOM05D005034 ORTHO05D006234 7.3e-07 57.0 35 74.3
Ciclev10027652m.g Citrus clementina HOM05D005034 ORTHO05D006234 7.3e-07 57.0 35 74.3
Ciclev10030457m.g Citrus clementina HOM05D005034 ORTHO05D006234 7.3e-07 57.0 35 74.3


User provided reference genes

Program Settings