Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K01698 Eucalyptus grandis HOM05D008071 ORTHO05D009954 9.5e-72 273.5 145 100.0
Eucgr.K01697 Eucalyptus grandis HOM05D008071 ORTHO05D009954 2.3e-70 268.9 145 97.9
Dinv06965 Davidia involucrata HOM05D008071 ORTHO05D009954 3.5e-18 95.5 123 48.8
BcaB05g24356 Brassica carinata HOM05D008071 ORTHO05D009954 3.3e-16 89.0 145 41.4
AL1G40040 Arabidopsis lyrata HOM05D008071 ORTHO05D009954 1.3e-15 87.0 140 37.1
C02p24260 Brassica napus HOM05D008071 ORTHO05D009954 4.8e-15 85.1 137 40.1
BraA02t06549Z Brassica rapa HOM05D008071 ORTHO05D009954 4.8e-15 85.1 137 40.1
Sp5g23220 Schrenkiella parvula HOM05D008071 ORTHO05D009954 4.8e-15 85.1 137 40.9
QL07p015274 Quercus lobata HOM05D008071 ORTHO05D009954 8.2e-15 84.3 118 41.5
BcaC03g14931 Brassica carinata HOM05D008071 ORTHO05D009954 3.1e-14 82.4 137 39.4
BolC2t08535H Brassica oleracea HOM05D008071 ORTHO05D009954 3.1e-14 82.4 137 39.4
A02p14820 Brassica napus HOM05D008071 ORTHO05D009954 4.1e-14 82.0 137 39.4
Aa31LG7G9180 Aethionema arabicum HOM05D008071 ORTHO05D009954 5.3e-14 81.6 138 37.0
THA.LOC104827706 Tarenaya hassleriana HOM05D008071 ORTHO05D009954 9.0e-14 80.9 138 37.0
Carub.0001s2524 Capsella rubella HOM05D008071 ORTHO05D009954 1.3e-12 77.0 141 35.5
THA.LOC104827708 Tarenaya hassleriana HOM05D008071 ORTHO05D009954 1.3e-12 77.0 134 41.0
BcaC01g01683 Brassica carinata HOM05D008071 ORTHO05D009954 4.2e-11 72.0 137 36.5
BolC3t19602H Brassica oleracea HOM05D008071 ORTHO05D009954 4.2e-11 72.0 137 36.5
Carub.0001s2523 Capsella rubella HOM05D008071 ORTHO05D009954 7.2e-11 71.2 140 32.9
Rhsim03G0040600 Rhododendron simsii HOM05D008071 ORTHO05D009954 2.7e-10 69.3 130 34.6
C03p73050 Brassica napus HOM05D008071 ORTHO05D009954 6.1e-10 68.2 137 35.0
Carub.0001s2525 Capsella rubella HOM05D008071 ORTHO05D009954 1.0e-09 67.4 129 38.0
Dinv13279 Davidia involucrata HOM05D008071 ORTHO05D009954 1.8e-09 66.6 125 39.2
BraA08t34634Z Brassica rapa HOM05D008071 ORTHO05D009954 3.0e-09 65.9 137 34.3
DCAR_008214 Daucus carota HOM05D014896 ORTHO05D016270 1.5e-08 63.5 140 35.0
Nitab4.5_0006448g0040 Nicotiana tabacum HOM05D013183 ORTHO05D009954 2.0e-08 63.2 127 34.6
BcaC02g12899 Brassica carinata HOM05D008071 ORTHO05D009954 2.5e-08 62.8 139 35.3
Nitab4.5_0000123g0160 Nicotiana tabacum HOM05D013183 ORTHO05D009954 3.3e-08 62.4 120 38.3
DCAR_008212 Daucus carota HOM05D014896 ORTHO05D016270 9.7e-08 60.8 147 33.3
DCAR_008215 Daucus carota HOM05D014896 ORTHO05D016270 1.1e-06 57.4 148 31.1
A07p12520 Brassica napus HOM05D008071 ORTHO05D009954 4.1e-06 55.5 135 34.8
CARHR136500 Cardamine hirsuta HOM05D008071 ORTHO05D009954 5.3e-06 55.1 128 33.6
BcaB03g14030 Brassica carinata HOM05D008071 ORTHO05D009954 6.9e-06 54.7 125 34.4
BcaB03g14033 Brassica carinata HOM05D008071 ORTHO05D009954 6.9e-06 54.7 125 34.4
DCAR_008209 Daucus carota HOM05D014896 ORTHO05D016270 6.9e-06 54.7 150 28.0


User provided reference genes

Program Settings