Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K01616 Eucalyptus grandis HOM05D003833 ORTHO05D004209 1.5e-78 296.2 155 100.0
PGR142G2709 Punica granatum HOM05D003833 ORTHO05D004209 2.6e-51 205.7 138 79.0
Atru.chr1.1452 Acer truncatum HOM05D003833 ORTHO05D004209 2.9e-50 202.2 138 76.8
Atru.chr1.1464 Acer truncatum HOM05D003833 ORTHO05D004209 2.9e-50 202.2 138 76.8
Manes.09G008001 Manihot esculenta HOM05D003833 ORTHO05D004209 3.8e-50 201.8 136 76.5
CiPaw.09G044700 Carya illinoinensis HOM05D003833 ORTHO05D004209 8.4e-50 200.7 136 77.9
TWI53G1459 Tripterygium wilfordii HOM05D003833 ORTHO05D004209 8.4e-50 200.7 136 78.7
PGR042G2932 Punica granatum HOM05D003833 ORTHO05D004209 1.1e-49 200.3 138 76.8
CSS0041120 Camellia sinensis var. sinensis HOM05D003833 ORTHO05D004209 4.2e-49 198.4 135 78.5
Medtr7g090160 Medicago truncatula HOM05D003833 ORTHO05D004209 4.2e-49 198.4 136 76.5
CANSAT64G1401 Cannabis sativa HOM05D003833 ORTHO05D004209 7.1e-49 197.6 136 75.7
Ca_08401_v3 Cicer arietinum L. HOM05D003833 ORTHO05D004209 9.2e-49 197.2 136 76.5
Dinv34388 Davidia involucrata HOM05D003833 ORTHO05D004209 9.2e-49 197.2 136 77.2
RcHm_v2.0_Chr1g0334171 Rosa chinensis HOM05D003833 ORTHO05D004209 9.2e-49 197.2 136 75.0
Ciclev10005607m.g Citrus clementina HOM05D003833 ORTHO05D004209 1.2e-48 196.8 136 76.5
FAN14G1808 Fragaria x ananassa HOM05D003833 ORTHO05D004209 1.2e-48 196.8 136 75.7
Potri.006G042600 Populus trichocarpa HOM05D003833 ORTHO05D004209 1.2e-48 196.8 136 75.7
Sabra06G0028900 Salix brachista HOM05D003833 ORTHO05D004209 2.1e-48 196.1 136 75.7
TPR.G9312 Trifolium pratense HOM05D003833 ORTHO05D004209 2.1e-48 196.1 136 75.7
Lj1A1105T22 Lonicera japonica HOM05D003833 ORTHO05D004209 2.7e-48 195.7 136 76.5
Psat3g078000 Pisum sativum HOM05D003833 ORTHO05D004209 2.7e-48 195.7 136 75.7
FvH4_6g25150 Fragaria vesca HOM05D003833 ORTHO05D004209 3.5e-48 195.3 136 75.0
FAN05G1327 Fragaria x ananassa HOM05D003833 ORTHO05D004209 3.5e-48 195.3 136 75.0
FAN05G4135 Fragaria x ananassa HOM05D003833 ORTHO05D004209 3.5e-48 195.3 136 75.0
Duzib093G1609 Durio zibethinus HOM05D003833 ORTHO05D004209 4.6e-48 194.9 136 74.3
DCAR_020545 Daucus carota HOM05D003833 ORTHO05D004209 6.0e-48 194.5 136 76.5
Dinv03868 Davidia involucrata HOM05D003833 ORTHO05D004209 6.0e-48 194.5 136 76.5
FAN02G2058 Fragaria x ananassa HOM05D003833 ORTHO05D004209 1.0e-47 193.7 136 75.0
Rhsim03G0034800 Rhododendron simsii HOM05D003833 ORTHO05D004209 1.0e-47 193.7 135 76.3
RhsimUnG0217200 Rhododendron simsii HOM05D003833 ORTHO05D004209 1.0e-47 193.7 135 76.3
TAR623G1635 Trochodendron aralioides HOM05D003833 ORTHO05D004209 1.0e-47 193.7 136 73.5
arahy.Tifrunner.gnm1.ann1.LP5CTB Arachis hypogaea HOM05D003833 ORTHO05D004209 1.3e-47 193.4 136 75.0
MSTRG.10798 Avicennia marina HOM05D003833 ORTHO05D004209 1.3e-47 193.4 136 75.7
Lj2A394G34 Lonicera japonica HOM05D003833 ORTHO05D004209 1.3e-47 193.4 138 72.5
MELO3C019039.2 Cucumis melo HOM05D003833 ORTHO05D004209 1.7e-47 193.0 138 71.7
vmacro07822 Vaccinium macrocarpon HOM05D003833 ORTHO05D004209 1.7e-47 193.0 135 76.3
COL.COLO4_33945 Corchorus olitorius HOM05D003833 ORTHO05D004209 2.3e-47 192.6 136 74.3
CsaV3_4G027860 Cucumis sativus L. HOM05D003833 ORTHO05D004209 2.3e-47 192.6 138 71.0
MD12G1094200 Malus domestica HOM05D003833 ORTHO05D004209 2.3e-47 192.6 135 74.1
Lalb_Chr14g0365931 Lupinus albus HOM05D003833 ORTHO05D004209 3.0e-47 192.2 136 72.8
ClCG04G004210 Citrullus lanatus HOM05D003833 ORTHO05D004209 3.9e-47 191.8 138 72.5
RcHm_v2.0_Chr2g0125021 Rosa chinensis HOM05D003833 ORTHO05D004209 3.9e-47 191.8 136 73.5
arahy.Tifrunner.gnm1.ann1.C9KHWR Arachis hypogaea HOM05D003833 ORTHO05D004209 5.1e-47 191.4 136 74.3
Haze_19732 Corylus avellana HOM05D003833 ORTHO05D004209 5.1e-47 191.4 136 74.3
Dinv08489 Davidia involucrata HOM05D003833 ORTHO05D004209 5.1e-47 191.4 136 74.3
MD14G1084400 Malus domestica HOM05D003833 ORTHO05D004209 5.1e-47 191.4 135 73.3
Thecc.05G140900 Theobroma cacao HOM05D003833 ORTHO05D004209 6.6e-47 191.0 136 73.5
Glyma.19G131500 Glycine max HOM05D003833 ORTHO05D004209 8.7e-47 190.7 136 72.8
Cpa.g.sc49.96 Carica papaya HOM05D003833 ORTHO05D004209 1.1e-46 190.3 136 72.8
ECA232G1919 Erigeron canadensis HOM05D003833 ORTHO05D004209 1.5e-46 189.9 136 72.1
Lj1g0026826 Lotus japonicus HOM05D003833 ORTHO05D004209 1.5e-46 189.9 136 72.8
QL07p007726 Quercus lobata HOM05D003833 ORTHO05D004209 1.5e-46 189.9 136 72.1
Phvul.001G124300 Phaseolus vulgaris HOM05D003833 ORTHO05D004209 1.9e-46 189.5 136 72.8
Aqoxy2G00325 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 2.5e-46 189.1 135 73.3
Gohir.A07G024700 Gossypium hirsutum HOM05D003833 ORTHO05D004209 2.5e-46 189.1 136 72.1
PGSC0003DMG400010441 Solanum tuberosum HOM05D003833 ORTHO05D004209 2.5e-46 189.1 133 75.2
Aqoxy2G03781 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 3.3e-46 188.7 135 72.6
Migut.K00123 Erythranthe guttata HOM05D003833 ORTHO05D004209 3.3e-46 188.7 136 72.8
Ah.04g151120 Amaranthus hybridus HOM05D003833 ORTHO05D004209 5.6e-46 188.0 133 75.2
Cfa016709 Carpinus fangiana HOM05D003833 ORTHO05D004209 5.6e-46 188.0 136 72.8
Sed0017232 Sechium edule HOM05D003833 ORTHO05D004209 5.6e-46 188.0 138 71.0
Glyma.03G129100 Glycine max HOM05D003833 ORTHO05D004209 7.3e-46 187.6 136 71.3
Gohir.D07G028300 Gossypium hirsutum HOM05D003833 ORTHO05D004209 7.3e-46 187.6 136 71.3
Gorai.001G029600 Gossypium raimondii HOM05D003833 ORTHO05D004209 7.3e-46 187.6 136 71.3
EL10Ac3g07192 Beta vulgaris HOM05D003833 ORTHO05D004209 1.3e-45 186.8 136 72.8
Sed0027268 Sechium edule HOM05D003833 ORTHO05D004209 1.3e-45 186.8 138 70.3
Sc13g0001320 Simmondsia chinensis HOM05D003833 ORTHO05D004209 1.3e-45 186.8 136 71.3
MSTRG.15651 Avicennia marina HOM05D003833 ORTHO05D004209 1.6e-45 186.4 136 72.8
Hund24632 Selenicereus undatus HOM05D003833 ORTHO05D004209 2.1e-45 186.0 133 73.7
VMungo1383G2371 Vigna mungo HOM05D003833 ORTHO05D004209 2.1e-45 186.0 136 71.3
AUR62030362 Chenopodium quinoa HOM05D003833 ORTHO05D004209 3.6e-45 185.3 136 72.8
Ah.13g077020 Amaranthus hybridus HOM05D003833 ORTHO05D004209 4.8e-45 184.9 133 73.7
AUR62040845 Chenopodium quinoa HOM05D003833 ORTHO05D004209 4.8e-45 184.9 136 72.1
Actinidia39173 Actinidia chinensis HOM05D003833 ORTHO05D004209 6.2e-45 184.5 136 72.1
Lsat_1_v5_gn_4_129320 Lactuca sativa HOM05D003833 ORTHO05D004209 6.2e-45 184.5 136 70.6
Nitab4.5_0006282g0020 Nicotiana tabacum HOM05D003833 ORTHO05D004209 6.2e-45 184.5 137 72.3
Oeu029492.1 Olea europaea HOM05D003833 ORTHO05D004209 6.2e-45 184.5 136 72.1
SGA_v2.0_scaffold94G28522 Striga asiatica HOM05D003833 ORTHO05D004209 6.2e-45 184.5 136 72.1
Solyc02g068640.3 Solanum lycopersicum HOM05D003833 ORTHO05D004209 8.1e-45 184.1 133 73.7
Sopen02g017810 Solanum pennellii HOM05D003833 ORTHO05D004209 8.1e-45 184.1 133 73.7
HanXRQChr09g0266491 Helianthus annuus HOM05D003833 ORTHO05D004209 1.1e-44 183.7 136 69.1
Prupe.7G045500 Prunus persica HOM05D003833 ORTHO05D004209 1.1e-44 183.7 135 71.1
GSVIVG01033588001 Vitis vinifera HOM05D003833 ORTHO05D004209 1.1e-44 183.7 136 71.3
BcaB01g05096 Brassica carinata HOM05D003833 ORTHO05D004209 3.1e-44 182.2 136 71.3
C03p07820 Brassica napus HOM05D003833 ORTHO05D004209 3.1e-44 182.2 136 71.3
BolC3t13281H Brassica oleracea HOM05D003833 ORTHO05D004209 3.1e-44 182.2 136 71.3
Sc13g0001340 Simmondsia chinensis HOM05D003833 ORTHO05D004209 3.1e-44 182.2 136 70.6
A03p06820 Brassica napus HOM05D003833 ORTHO05D004209 4.0e-44 181.8 136 70.6
A10p23880 Brassica napus HOM05D003833 ORTHO05D004209 5.3e-44 181.4 136 71.3
BraA03t10007Z Brassica rapa HOM05D003833 ORTHO05D004209 5.3e-44 181.4 138 69.6
BraA10t44452Z Brassica rapa HOM05D003833 ORTHO05D004209 5.3e-44 181.4 136 71.3
THA.LOC104816595 Tarenaya hassleriana HOM05D003833 ORTHO05D004209 5.3e-44 181.4 138 69.6
BcaC04g19007 Brassica carinata HOM05D003833 ORTHO05D004209 1.2e-43 180.3 136 70.6
C09p62360 Brassica napus HOM05D003833 ORTHO05D004209 1.2e-43 180.3 136 70.6
BolC9t59073H Brassica oleracea HOM05D003833 ORTHO05D004209 1.2e-43 180.3 136 70.6
SHI05043 Sapria himalayana HOM05D003833 ORTHO05D004209 1.2e-43 180.3 136 69.9
Peaxi162Scf00149g00116 Petunia axillaris HOM05D003833 ORTHO05D004209 1.5e-43 179.9 142 68.3
Sp6g29240 Schrenkiella parvula HOM05D003833 ORTHO05D004209 2.0e-43 179.5 136 70.6
BcaB08g36945 Brassica carinata HOM05D003833 ORTHO05D004209 5.8e-43 177.9 136 69.9
Thhalv10014353m.g Eutrema salsugineum HOM05D003833 ORTHO05D004209 5.8e-43 177.9 136 69.9
PSO210G1377 Papaver somniferum HOM05D003833 ORTHO05D004209 7.6e-43 177.6 136 69.1
PSO832G0079 Papaver somniferum HOM05D003833 ORTHO05D004209 7.6e-43 177.6 136 69.1
Nn7g36480 Nelumbo nucifera HOM05D003833 ORTHO05D004209 9.9e-43 177.2 114 81.6
Aa31LG11G14650 Aethionema arabicum HOM05D003833 ORTHO05D004209 1.3e-42 176.8 136 69.1
AT5G14800 Arabidopsis thaliana HOM05D003833 ORTHO05D004209 1.3e-42 176.8 136 68.4
Carub.0006s1298 Capsella rubella HOM05D003833 ORTHO05D004209 1.7e-42 176.4 136 68.4
Nitab4.5_0003379g0050 Nicotiana tabacum HOM05D003833 ORTHO05D004209 1.1e-41 173.7 159 61.6
MBI13_g29520_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 1.9e-41 172.9 136 67.6
CARHR198510 Cardamine hirsuta HOM05D003833 ORTHO05D004209 3.2e-41 172.2 136 66.9
AL6G25600 Arabidopsis lyrata HOM05D003833 ORTHO05D004209 5.4e-41 171.4 136 66.9
CDE09G0749 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 1.2e-40 170.2 136 65.4
CDE02G3693 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 2.1e-40 169.5 136 65.4
Cc06_g18620 Coffea canephora HOM05D003833 ORTHO05D004209 2.1e-40 169.5 138 65.2
PSO782G0909 Papaver somniferum HOM05D003833 ORTHO05D004209 2.1e-40 169.5 135 65.9
HPP92_001015 Vanilla planifolia HOM05D003833 ORTHO05D004209 3.5e-40 168.7 136 65.4
Zm00001eb141220 Zea mays HOM05D003833 ORTHO05D004209 8.7e-39 164.1 136 64.0
Os01g0948400 Oryza sativa ssp. japonica HOM05D003833 ORTHO05D004209 1.9e-38 162.9 136 64.0
Rhsim13G0081800 Rhododendron simsii HOM05D003833 ORTHO05D004209 2.5e-38 162.5 112 76.8
C03p82400 Brassica napus HOM05D003833 ORTHO05D004209 8.1e-37 157.5 118 71.2
BolC3t20513H Brassica oleracea HOM05D003833 ORTHO05D004209 8.1e-37 157.5 118 71.2
C03p82420 Brassica napus HOM05D003833 ORTHO05D004209 2.4e-36 156.0 118 70.3
BolC3t20511H Brassica oleracea HOM05D003833 ORTHO05D004209 2.4e-36 156.0 118 70.3
unitig_26.g8850 Utricularia gibba HOM05D003833 ORTHO05D004209 4.0e-36 155.2 119 68.1
Duzib056G0002 Durio zibethinus HOM05D003833 ORTHO05D004209 5.3e-36 154.8 120 69.2
Prupe.7G045400 Prunus persica HOM05D003833 ORTHO05D004209 1.2e-35 153.7 136 59.6
ATR0721G010 Amborella trichopoda HOM05D003833 ORTHO05D004209 1.5e-35 153.3 133 60.2
C04p16080 Brassica napus HOM05D003833 ORTHO05D004209 1.5e-35 153.3 118 69.5
BolC4t23181H Brassica oleracea HOM05D003833 ORTHO05D004209 1.5e-35 153.3 118 69.5
SEGI_35199 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 2.0e-35 152.9 136 60.3
BcaC02g10661 Brassica carinata HOM05D003833 ORTHO05D004209 2.6e-35 152.5 110 71.8
C04p26360 Brassica napus HOM05D003833 ORTHO05D004209 2.6e-35 152.5 110 71.8
BolC4t24169H Brassica oleracea HOM05D003833 ORTHO05D004209 2.6e-35 152.5 110 71.8
Mapoly0029s0092 Marchantia polymorpha HOM05D003833 ORTHO05D004209 4.5e-35 151.8 136 59.6
BcaC02g11392 Brassica carinata HOM05D003833 ORTHO05D004209 7.6e-35 151.0 118 68.6
MD12G1091800 Malus domestica HOM05D003833 ORTHO05D004209 1.7e-34 149.8 136 58.1
SEGI_40635 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 1.7e-34 149.8 134 60.4
BcaC06g33558 Brassica carinata HOM05D003833 ORTHO05D004209 4.9e-34 148.3 118 66.9
SMO337G0103 Selaginella moellendorffii HOM05D003833 ORTHO05D004209 6.4e-34 147.9 136 57.4
TAR623G0480 Trochodendron aralioides HOM05D003833 ORTHO05D004209 1.9e-33 146.4 89 82.0
AagrBONN_evm.TU.Sc2ySwM_368.1806 Anthoceros agrestis HOM05D003833 ORTHO05D004209 4.6e-32 141.7 135 56.3
CBR_g16006 Chara braunii HOM05D003833 ORTHO05D004209 4.6e-32 141.7 136 52.9
MD12G1094100 Malus domestica HOM05D003833 ORTHO05D004209 6.0e-32 141.4 136 55.9
AagrBONN_evm.TU.Sc2ySwM_368.156 Anthoceros agrestis HOM05D003833 ORTHO05D004209 1.3e-31 140.2 135 55.6
Pp3c10_15650 Physcomitrium patens HOM05D003833 ORTHO05D004209 1.8e-31 139.8 136 53.7
C06p25140 Brassica napus HOM05D003833 ORTHO05D004209 2.5e-30 136.0 117 64.1
FAN10G2875 Fragaria x ananassa HOM05D005759 ORTHO05D007172 4.3e-30 135.2 86 81.4
Cre03.g154550 Chlamydomonas reinhardtii HOM05D003833 ORTHO05D004209 1.3e-29 133.7 136 50.7
MBI03_g17131_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 1.3e-29 133.7 131 57.3
MBI03_g45406_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 2.1e-29 132.9 136 54.4
MBI09_g02151_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 2.4e-28 129.4 101 70.3
FAN06G3481 Fragaria x ananassa HOM05D003833 ORTHO05D004209 1.7e-26 123.2 136 54.4
Eucgr.K01625 Eucalyptus grandis HOM05D003833 ORTHO05D004209 2.5e-25 119.4 78 83.3
MCO05G631 Micromonas commoda HOM05D003833 ORTHO05D004209 3.2e-25 119.0 136 48.5
MCO04G012 Micromonas commoda HOM05D003833 ORTHO05D004209 6.0e-24 114.8 126 50.8
Nn1g08168 Nelumbo nucifera HOM05D003833 ORTHO05D004209 1.3e-23 113.6 119 52.9
BcaC08g44899 Brassica carinata HOM05D003833 ORTHO05D004209 2.1e-21 106.3 148 46.6
BolC6t37672H Brassica oleracea HOM05D003833 ORTHO05D004209 6.2e-21 104.8 89 66.3
FvH4_7g06311 Fragaria vesca HOM05D003833 ORTHO05D004209 2.4e-20 102.8 69 78.3
BcaC02g10122 Brassica carinata HOM05D003833 ORTHO05D004209 3.1e-20 102.4 115 53.0
PRCOL_00005946 Prasinoderma coloniale HOM05D003833 ORTHO05D004209 7.6e-19 97.8 136 42.6
MBI10_g20272_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 6.1e-16 88.2 59 76.3
Oeu050503.1 Olea europaea HOM05D003833 ORTHO05D004209 3.3e-14 82.4 74 62.2
Haze_27356 Corylus avellana HOM05D003833 ORTHO05D004209 1.2e-11 73.9 119 37.0
BcaC02g08088 Brassica carinata HOM05D003833 ORTHO05D004209 4.5e-11 72.0 54 74.1
BcaC02g11310 Brassica carinata HOM05D003833 ORTHO05D004209 5.9e-11 71.6 54 72.2
C04p17110 Brassica napus HOM05D003833 ORTHO05D004209 5.9e-11 71.6 54 72.2
BolC4t23262H Brassica oleracea HOM05D003833 ORTHO05D004209 5.9e-11 71.6 54 72.2
BolC8t47752H Brassica oleracea HOM05D003833 ORTHO05D004209 1.3e-10 70.5 54 72.2
Aqoxy3G03819 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 2.9e-10 69.3 49 71.4
C08p09060 Brassica napus HOM05D003833 ORTHO05D004209 2.9e-10 69.3 52 73.1
CBR_g37250 Chara braunii HOM05D003833 ORTHO05D004209 5.5e-09 65.1 71 47.9
Haze_26946 Corylus avellana HOM05D003833 ORTHO05D004209 3.9e-07 58.9 111 33.3
FvH4_7g06312 Fragaria vesca HOM05D003833 ORTHO05D004209 6.7e-07 58.2 46 58.7
BcaC07g37429 Brassica carinata HOM05D003833 ORTHO05D004209 9.7e-06 54.3 52 61.5


User provided reference genes

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