Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K01533 Eucalyptus grandis HOM05D006370 ORTHO05D008324 7.2e-87 323.9 170 100.0
Eucgr.K01528 Eucalyptus grandis HOM05D006370 ORTHO05D008324 3.8e-72 275.0 174 85.6
PGR142G0714 Punica granatum HOM05D006370 ORTHO05D008324 2.4e-42 176.0 162 65.4
Thecc.05G242700 Theobroma cacao HOM05D006370 ORTHO05D008324 3.5e-41 172.2 169 58.0
Cfa017718 Carpinus fangiana HOM05D006370 ORTHO05D008324 1.3e-40 170.2 164 59.8
Ciclev10022640m.g Citrus clementina HOM05D006370 ORTHO05D008324 5.6e-39 164.9 151 60.3
GSVIVG01022435001 Vitis vinifera HOM05D006370 ORTHO05D008324 2.1e-38 162.9 164 56.7
Cpa.g.sc161.33 Carica papaya HOM05D006370 ORTHO05D008324 2.8e-38 162.5 165 56.4
Duzib177G0489 Durio zibethinus HOM05D006370 ORTHO05D008324 3.6e-38 162.2 165 57.6
MD12G1010600 Malus domestica HOM05D006370 ORTHO05D008324 6.2e-38 161.4 168 60.1
Hma1.2p1_0526F.1_g172840 Hydrangea macrophylla HOM05D006370 ORTHO05D008324 8.1e-38 161.0 154 61.7
Potri.013G065200 Populus trichocarpa HOM05D006370 ORTHO05D008324 1.1e-37 160.6 151 59.6
Atru.chr2.1510 Acer truncatum HOM05D006370 ORTHO05D008324 1.4e-37 160.2 168 55.4
Lj1A1073T41 Lonicera japonica HOM05D006370 ORTHO05D008324 2.3e-37 159.5 171 56.7
Sabra13G0056900 Salix brachista HOM05D006370 ORTHO05D008324 6.8e-37 157.9 150 58.7
Sabra13G0057100 Salix brachista HOM05D006370 ORTHO05D008324 6.8e-37 157.9 150 58.0
Manes.09G136900 Manihot esculenta HOM05D006370 ORTHO05D008324 1.5e-36 156.8 165 58.2
COL.COLO4_28633 Corchorus olitorius HOM05D006370 ORTHO05D008324 5.8e-36 154.8 167 52.7
Duzib128G1808 Durio zibethinus HOM05D006370 ORTHO05D008324 1.7e-35 153.3 158 55.7
Nn2g14550 Nelumbo nucifera HOM05D006370 ORTHO05D008324 1.7e-35 153.3 174 55.2
Gohir.A11G229500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 2.9e-35 152.5 170 52.4
Gohir.D11G241500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 3.7e-35 152.1 170 51.8
MSTRG.6248 Avicennia marina HOM05D006370 ORTHO05D008324 1.9e-34 149.8 172 54.7
TAR623G1163 Trochodendron aralioides HOM05D006370 ORTHO05D008324 1.9e-34 149.8 179 53.6
Gorai.007G255600 Gossypium raimondii HOM05D006370 ORTHO05D008324 7.1e-34 147.9 170 50.6
SalBow6G1190 Salvia bowleyana HOM05D006370 ORTHO05D008324 7.1e-34 147.9 174 57.5
Rhsim03G0049800 Rhododendron simsii HOM05D006370 ORTHO05D008324 1.2e-33 147.1 189 51.3
TWI60G1203 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 2.1e-33 146.4 156 51.3
Migut.J01529 Erythranthe guttata HOM05D006370 ORTHO05D008324 2.7e-33 146.0 164 54.3
CiPaw.09G166900 Carya illinoinensis HOM05D006370 ORTHO05D008324 3.5e-33 145.6 168 53.0
Cc10_g11540 Coffea canephora HOM05D006370 ORTHO05D008324 7.8e-33 144.4 164 56.1
vmacro07654 Vaccinium macrocarpon HOM05D006370 ORTHO05D008324 1.0e-32 144.1 175 54.3
MD14G1007700 Malus domestica HOM05D006370 ORTHO05D008324 1.7e-32 143.3 143 62.2
TWI34G0169 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 2.3e-32 142.9 163 51.5
EL10Ac5g11708 Beta vulgaris HOM05D006370 ORTHO05D008324 1.1e-31 140.6 169 52.1
CANSAT01G3230 Cannabis sativa HOM05D006370 ORTHO05D008324 1.1e-31 140.6 157 53.5
AUR62042155 Chenopodium quinoa HOM05D006370 ORTHO05D008324 7.3e-31 137.9 169 49.1
AUR62043361 Chenopodium quinoa HOM05D006370 ORTHO05D008324 2.8e-30 136.0 165 49.1
RcHm_v2.0_Chr3g0496161 Rosa chinensis HOM05D006370 ORTHO05D008324 6.2e-30 134.8 161 49.7
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 8.1e-30 134.4 156 55.1
Glyma.19G010300 Glycine max HOM05D006370 ORTHO05D008324 6.8e-29 131.3 150 51.3
Glyma.13G170200 Glycine max HOM05D006370 ORTHO05D008324 8.9e-29 131.0 161 51.6
HanXRQChr01g0026941 Helianthus annuus HOM05D006370 ORTHO05D008324 1.2e-28 130.6 166 48.8
FAN26G3131 Fragaria x ananassa HOM05D006370 ORTHO05D008324 1.5e-28 130.2 148 54.1
CDE10G0775 Ceratophyllum demersum HOM05D006370 ORTHO05D008324 2.6e-28 129.4 155 52.3
arahy.Tifrunner.gnm1.ann1.AZ5GA5 Arachis hypogaea HOM05D006370 ORTHO05D008324 4.4e-28 128.6 156 51.3
Haze_20411 Corylus avellana HOM05D006370 ORTHO05D008324 4.4e-28 128.6 108 60.2
Lalb_Chr06g0174141 Lupinus albus HOM05D006370 ORTHO05D008324 5.8e-28 128.3 155 50.3
SGA_v2.0_scaffold69G23224 Striga asiatica HOM05D006370 ORTHO05D008324 5.8e-28 128.3 176 50.0
FvH4_1g28570 Fragaria vesca HOM05D006370 ORTHO05D008324 7.6e-28 127.9 144 52.8
THA.LOC104800075 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 7.6e-28 127.9 176 46.0
Dinv25046 Davidia involucrata HOM05D006370 ORTHO05D008324 1.3e-27 127.1 105 62.9
PSO339G2906 Papaver somniferum HOM05D006370 ORTHO05D008324 1.3e-27 127.1 171 47.4
AT5G37480 Arabidopsis thaliana HOM05D006370 ORTHO05D008324 2.2e-27 126.3 148 46.6
Aqoxy1G00517 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 2.9e-27 125.9 172 44.2
THA.LOC104800403 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 2.9e-27 125.9 175 46.3
arahy.Tifrunner.gnm1.ann1.ZL000T Arachis hypogaea HOM05D006370 ORTHO05D008324 3.8e-27 125.6 156 51.3
ECA248G1067 Erigeron canadensis HOM05D006370 ORTHO05D008324 4.9e-27 125.2 154 48.1
FAN19G0680 Fragaria x ananassa HOM05D006370 ORTHO05D008324 1.1e-26 124.0 162 48.8
unitig_744.g24144 Utricularia gibba HOM05D006370 ORTHO05D000703 1.4e-26 123.6 148 50.7
Prupe.7G012600 Prunus persica HOM05D006370 ORTHO05D008324 2.4e-26 122.9 79 72.2
Aa31LG9G17570 Aethionema arabicum HOM05D006370 ORTHO05D008324 3.2e-26 122.5 175 44.0
PSO063G0933 Papaver somniferum HOM05D006370 ORTHO05D008324 4.1e-26 122.1 163 46.6
Dinv05555 Davidia involucrata HOM05D006370 ORTHO05D008324 7.1e-26 121.3 115 59.1
THA.LOC104823775 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 7.1e-26 121.3 179 43.0
FAN28G0334 Fragaria x ananassa HOM05D006370 ORTHO05D008324 9.2e-26 120.9 162 48.8
Zm00001eb057190 Zea mays HOM05D006370 ORTHO05D008324 1.2e-25 120.6 153 45.8
Os03g0748600 Oryza sativa ssp. japonica HOM05D006370 ORTHO05D008324 3.5e-25 119.0 158 44.9
Medtr6g027600 Medicago truncatula HOM05D006370 ORTHO05D008324 1.0e-24 117.5 154 49.4
Actinidia37817 Actinidia chinensis HOM05D006370 ORTHO05D008324 1.7e-24 116.7 93 63.4
Sp7g04690 Schrenkiella parvula HOM05D006370 ORTHO05D008324 3.0e-24 115.9 176 43.2
BcaB06g27082 Brassica carinata HOM05D006370 ORTHO05D008324 3.9e-24 115.5 165 47.3
Psat1g089760 Pisum sativum HOM05D006370 ORTHO05D008324 6.6e-24 114.8 154 48.7
CARHR215460 Cardamine hirsuta HOM05D006370 ORTHO05D008324 8.6e-24 114.4 174 46.6
A04p10640 Brassica napus HOM05D006370 ORTHO05D008324 1.9e-23 113.2 160 46.9
BcaC02g09577 Brassica carinata HOM05D006370 ORTHO05D008324 3.3e-23 112.5 156 46.8
BolC4t26007H Brassica oleracea HOM05D006370 ORTHO05D008324 3.3e-23 112.5 156 46.8
TAR633G0247 Trochodendron aralioides HOM05D001480 ORTHO05D001331 3.3e-23 112.5 74 70.3
Nitab4.5_0000613g0010 Nicotiana tabacum HOM05D006370 ORTHO05D008324 9.6e-23 110.9 171 43.3
Thhalv10028111m.g Eutrema salsugineum HOM05D006370 ORTHO05D008324 1.2e-22 110.5 164 45.1
Phvul.004G050600 Phaseolus vulgaris HOM05D006370 ORTHO05D008324 2.1e-22 109.8 101 55.4
Lsat_1_v5_gn_1_55401 Lactuca sativa HOM05D006370 ORTHO05D008324 6.2e-22 108.2 90 57.8
Sopen10g031990 Solanum pennellii HOM05D006370 ORTHO05D008324 6.2e-22 108.2 169 44.4
Aqoxy1G00515 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 1.4e-21 107.1 80 62.5
Carub.0007s3265 Capsella rubella HOM05D006370 ORTHO05D008324 1.4e-21 107.1 154 44.2
C04p44360 Brassica napus HOM05D006370 ORTHO05D008324 1.8e-21 106.7 156 46.2
Solyc10g081480.2 Solanum lycopersicum HOM05D006370 ORTHO05D008324 3.1e-21 105.9 170 42.4
PGSC0003DMG400028217 Solanum tuberosum HOM05D006370 ORTHO05D008324 1.2e-20 104.0 167 42.5
Aqoxy1G00516 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 1.5e-20 103.6 92 54.3
HPP92_022911 Vanilla planifolia HOM05D006370 ORTHO05D008324 2.0e-20 103.2 157 43.3
Sc07g0007490 Simmondsia chinensis HOM05D006370 ORTHO05D008324 4.4e-20 102.1 136 47.1
SEGI_24903 Sequoiadendron giganteum HOM05D006370 ORTHO05D008324 5.8e-20 101.7 158 42.4
VMungo0540G0157 Vigna mungo HOM05D006370 ORTHO05D008324 1.1e-18 97.4 88 56.8
SalBow4G2194 Salvia bowleyana HOM05D006370 ORTHO05D008324 9.3e-18 94.4 98 59.2
SalBow6G3000 Salvia bowleyana HOM05D006370 ORTHO05D008324 9.3e-18 94.4 98 59.2
SGA_v2.0_scaffold66G22394 Striga asiatica HOM05D006370 ORTHO05D008324 3.3e-15 85.9 168 44.0
Nitab4.5_0000387g0020 Nicotiana tabacum HOM05D006370 ORTHO05D008324 4.8e-14 82.0 94 47.9
Lj2g0006862 Lotus japonicus HOM05D006370 ORTHO05D008324 6.2e-14 81.6 143 37.8
Mapoly0007s0154 Marchantia polymorpha HOM05D006370 ORTHO05D008324 1.7e-11 73.6 109 42.2
BcaC05g29112 Brassica carinata HOM05D006370 ORTHO05D008324 2.2e-11 73.2 91 46.2
Mapoly0066s0112 Marchantia polymorpha HOM05D006370 ORTHO05D008324 4.9e-11 72.0 91 42.9
C05p53410 Brassica napus HOM05D006370 ORTHO05D008324 1.1e-10 70.9 91 45.1
BolC5t34010H Brassica oleracea HOM05D006370 ORTHO05D008324 4.2e-10 68.9 91 45.1
BolC5t34018H Brassica oleracea HOM05D006370 ORTHO05D008324 4.2e-10 68.9 91 45.1
SMO196G0263 Selaginella moellendorffii HOM05D006370 ORTHO05D008324 4.2e-10 68.9 156 37.2
Pp3c22_7490 Physcomitrium patens HOM05D006370 ORTHO05D008324 1.5e-07 60.5 65 46.2
Pp3c19_3200 Physcomitrium patens HOM05D006370 ORTHO05D008324 8.1e-06 54.7 82 41.5
SalBow5G3237 Salvia bowleyana HOM05D006370 ORTHO05D008324 8.1e-06 54.7 47 63.8


User provided reference genes

Program Settings