Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K01501 Eucalyptus grandis HOM05D004778 ORTHO05D005679 7.4e-57 223.8 125 100.0
Potri.013G057500 Populus trichocarpa HOM05D004778 ORTHO05D005679 2.8e-11 72.4 57 75.4
Manes.08G144900 Manihot esculenta HOM05D004778 ORTHO05D005679 6.2e-11 71.2 61 70.5
Nn2g15855 Nelumbo nucifera HOM05D004778 ORTHO05D005679 2.3e-10 69.3 118 48.3
Thecc.05G250100 Theobroma cacao HOM05D004778 ORTHO05D005679 3.1e-10 68.9 58 72.4
Potri.019G035500 Populus trichocarpa HOM05D004778 ORTHO05D005679 1.2e-09 67.0 58 67.2
Duzib106G1560 Durio zibethinus HOM05D004778 ORTHO05D005679 1.5e-09 66.6 58 70.7
Manes.09G140700 Manihot esculenta HOM05D004778 ORTHO05D005679 1.5e-09 66.6 57 73.7
Duzib106G0337 Durio zibethinus HOM05D004778 ORTHO05D005679 2.6e-09 65.9 58 69.0
Hma1.2p1_0152F.1_g067660 Hydrangea macrophylla HOM05D004778 ORTHO05D005679 3.4e-09 65.5 58 69.0
Duzib128G0115 Durio zibethinus HOM05D004778 ORTHO05D005679 4.4e-09 65.1 57 68.4
CANSAT78G1478 Cannabis sativa HOM05D004778 ORTHO05D005679 7.5e-09 64.3 58 67.2
Rhsim13G0232700 Rhododendron simsii HOM05D004778 ORTHO05D005679 7.5e-09 64.3 70 60.0
Cpa.g.sc119.43 Carica papaya HOM05D004778 ORTHO05D005679 1.3e-08 63.5 60 65.0
Gohir.D11G246400 Gossypium hirsutum HOM05D004778 ORTHO05D005679 1.3e-08 63.5 58 63.8
TAR633G1575 Trochodendron aralioides HOM05D004778 ORTHO05D005679 1.7e-08 63.2 57 66.7
Hma1.2p1_0589F.1_g184910 Hydrangea macrophylla HOM05D004778 ORTHO05D005679 2.9e-08 62.4 58 67.2
COL.COLO4_36083 Corchorus olitorius HOM05D004778 ORTHO05D005679 3.7e-08 62.0 60 68.3
PGR142G3834 Punica granatum HOM05D004778 ORTHO05D005679 3.7e-08 62.0 57 64.9
Sabra19G0043900 Salix brachista HOM05D004778 ORTHO05D005679 3.7e-08 62.0 60 66.7
Sabra19G0047200 Salix brachista HOM05D004778 ORTHO05D005679 3.7e-08 62.0 60 66.7
TWI32G0653 Tripterygium wilfordii HOM05D004778 ORTHO05D005679 3.7e-08 62.0 58 62.1
Aqoxy1G00473 Aquilegia oxysepala HOM05D004778 ORTHO05D005679 1.1e-07 60.5 57 61.4
Potri.003G220900 Populus trichocarpa HOM05D004778 ORTHO05D005679 1.1e-07 60.5 101 41.6
TAR623G1546 Trochodendron aralioides HOM05D004778 ORTHO05D005679 1.1e-07 60.5 57 64.9
AL7G26630 Arabidopsis lyrata HOM05D004778 ORTHO05D005679 1.9e-07 59.7 57 66.7
AT4G26320 Arabidopsis thaliana HOM05D004778 ORTHO05D005679 1.9e-07 59.7 57 66.7
Thhalv10027232m.g Eutrema salsugineum HOM05D004778 ORTHO05D005679 2.4e-07 59.3 81 50.6
BcaB01g04406 Brassica carinata HOM05D004778 ORTHO05D005679 3.2e-07 58.9 62 62.9
Duzib177G0058 Durio zibethinus HOM05D004778 ORTHO05D005679 3.2e-07 58.9 58 60.3
PSO339G4337 Papaver somniferum HOM05D004778 ORTHO05D005679 3.2e-07 58.9 57 66.7
Cfa009564 Carpinus fangiana HOM05D004778 ORTHO05D005679 5.4e-07 58.2 60 60.0
Carub.0008s1702 Capsella rubella HOM05D004778 ORTHO05D005679 7.1e-07 57.8 59 62.7
Gohir.A13G099600 Gossypium hirsutum HOM05D004778 ORTHO05D005679 7.1e-07 57.8 58 62.1
PSO384G2791 Papaver somniferum HOM05D004778 ORTHO05D005679 9.2e-07 57.4 57 64.9
Carub.0007s1462 Capsella rubella HOM05D004778 ORTHO05D005679 1.2e-06 57.0 57 64.9
Solyc01g005590.2 Solanum lycopersicum HOM05D004778 ORTHO05D005679 1.6e-06 56.6 61 59.0
Prupe.6G003500 Prunus persica HOM05D004778 ORTHO05D005679 2.1e-06 56.2 60 61.7
Aa31LG3G12430 Aethionema arabicum HOM05D004778 ORTHO05D005679 2.7e-06 55.8 60 58.3
PSO339G2985 Papaver somniferum HOM05D004778 ORTHO05D005679 2.7e-06 55.8 58 62.1
PSO339G3395 Papaver somniferum HOM05D004778 ORTHO05D005679 2.7e-06 55.8 58 63.8
Aqoxy2G00513 Aquilegia oxysepala HOM05D004778 ORTHO05D005679 3.5e-06 55.5 60 56.7
BcaC03g14215 Brassica carinata HOM05D004778 ORTHO05D005679 3.5e-06 55.5 59 61.0
C02p15150 Brassica napus HOM05D004778 ORTHO05D005679 3.5e-06 55.5 59 61.0
BolC2t07632H Brassica oleracea HOM05D004778 ORTHO05D005679 3.5e-06 55.5 59 61.0
CARHR233890 Cardamine hirsuta HOM05D004778 ORTHO05D005679 3.5e-06 55.5 57 59.6
PSO384G3395 Papaver somniferum HOM05D004778 ORTHO05D005679 3.5e-06 55.5 58 60.3
PSO384G3806 Papaver somniferum HOM05D004778 ORTHO05D005679 3.5e-06 55.5 58 62.1
Sp6g18330 Schrenkiella parvula HOM05D004778 ORTHO05D005679 3.5e-06 55.5 59 61.0
THA.LOC109116609 Tarenaya hassleriana HOM05D004778 ORTHO05D005679 3.5e-06 55.5 63 66.7
A01p17570 Brassica napus HOM05D004778 ORTHO05D005679 4.6e-06 55.1 57 61.4
BraA01t01710Z Brassica rapa HOM05D004778 ORTHO05D005679 4.6e-06 55.1 57 61.4
Cfa001534 Carpinus fangiana HOM05D004778 ORTHO05D005679 4.6e-06 55.1 58 63.8
Gohir.D13G103100 Gossypium hirsutum HOM05D004778 ORTHO05D005679 4.6e-06 55.1 58 60.3
PSO339G3914 Papaver somniferum HOM05D004778 ORTHO05D005679 6.0e-06 54.7 59 59.3
PGSC0003DMG400032211 Solanum tuberosum HOM05D004778 ORTHO05D005679 6.0e-06 54.7 60 58.3


User provided reference genes

Program Settings