Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K01432 Eucalyptus grandis HOM05D010218 ORTHO05D007072 2.7e-130 469.9 567 100.0
Eucgr.J00028 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.5e-19 102.1 93 60.2
Eucgr.L00927 Eucalyptus grandis HOM05D010218 ORTHO05D007072 1.5e-19 102.1 93 60.2
Eucgr.C01424 Eucalyptus grandis HOM05D000467 ORTHO05D000379 7.4e-19 99.8 93 61.3
Eucgr.E03501 Eucalyptus grandis HOM05D000005 ORTHO05D007072 7.4e-19 99.8 93 57.0
Eucgr.H02669 Eucalyptus grandis HOM05D010218 ORTHO05D007072 2.1e-18 98.2 93 63.4
Eucgr.E03529 Eucalyptus grandis HOM05D010218 ORTHO05D007072 6.2e-18 96.7 90 58.9
Eucgr.C00054 Eucalyptus grandis HOM05D010218 ORTHO05D007072 1.8e-17 95.1 92 58.7
Eucgr.C01408 Eucalyptus grandis HOM05D010218 ORTHO05D007072 1.8e-17 95.1 93 60.2
Eucgr.C01436 Eucalyptus grandis HOM05D010218 ORTHO05D007072 1.8e-17 95.1 93 59.1
Eucgr.C01345 Eucalyptus grandis HOM05D010218 ORTHO05D007072 6.9e-17 93.2 93 67.7
Eucgr.C01443 Eucalyptus grandis HOM05D000005 ORTHO05D007072 9.0e-17 92.8 91 56.0
Eucgr.C01600 Eucalyptus grandis HOM05D000005 ORTHO05D000294 1.5e-16 92.0 87 57.5
Eucgr.C01492 Eucalyptus grandis HOM05D000005 ORTHO05D007073 1.3e-15 89.0 91 70.3
Eucgr.C01486 Eucalyptus grandis HOM05D016032 ORTHO05D007072 1.7e-15 88.6 342 26.6
Eucgr.L01097 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.9e-15 87.8 92 53.3
Eucgr.C01597 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.2e-14 84.3 92 52.2
Eucgr.C01355 Eucalyptus grandis HOM05D010218 ORTHO05D007072 2.1e-13 81.6 94 55.3
Eucgr.C01429 Eucalyptus grandis HOM05D000467 ORTHO05D007072 1.0e-12 79.3 93 51.6
Eucgr.C01403 Eucalyptus grandis HOM05D010218 ORTHO05D007072 3.0e-12 77.8 75 58.7
Eucgr.C01459 Eucalyptus grandis HOM05D010218 ORTHO05D007072 3.9e-12 77.4 114 43.9
Eucgr.C01693 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.9e-12 77.4 80 62.5
Eucgr.C01367 Eucalyptus grandis HOM05D010218 ORTHO05D007072 5.1e-12 77.0 54 75.9
Eucgr.J01308 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.5e-11 75.5 90 46.7
Eucgr.J01301 Eucalyptus grandis HOM05D000005 ORTHO05D007073 1.9e-11 75.1 90 46.7
Eucgr.F04310 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.5e-11 74.7 89 46.1
Eucgr.K01874 Eucalyptus grandis HOM05D016032 ORTHO05D007072 2.5e-11 74.7 86 64.0
Eucgr.C01700 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.3e-11 74.3 79 55.7
Eucgr.C02630 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.3e-10 72.4 89 44.9
Eucgr.L01406 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.6e-10 72.0 90 44.4
Eucgr.E01860 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.8e-10 71.2 90 45.6
Eucgr.C00539 Eucalyptus grandis HOM05D000005 ORTHO05D191481 3.7e-10 70.9 80 71.2
Eucgr.E01836 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.7e-10 70.9 90 44.4
PGR142G0858 Punica granatum HOM05D000005 ORTHO05D000012 3.7e-10 70.9 91 47.3
Eucgr.C00271 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.8e-10 70.5 49 69.4
Eucgr.C01481 Eucalyptus grandis HOM05D000005 ORTHO05D000239 4.8e-10 70.5 53 64.2
Eucgr.D02396 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.8e-10 70.5 90 46.7
Eucgr.C01629 Eucalyptus grandis HOM05D010218 ORTHO05D007072 8.1e-10 69.7 53 69.8
Eucgr.C04272 Eucalyptus grandis HOM05D000005 ORTHO05D035199 1.1e-09 69.3 88 44.3
Eucgr.E01810 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.1e-09 69.3 90 44.4
Eucgr.J01336 Eucalyptus grandis HOM05D000005 ORTHO05D011459 1.1e-09 69.3 89 44.9
PGR142G1218 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-09 68.9 91 46.2
Eucgr.E01852 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.8e-09 68.6 90 43.3
Eucgr.E01865 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.8e-09 68.6 90 43.3
Eucgr.J01320 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.4e-09 68.2 90 42.2
Eucgr.C04271 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.1e-09 67.8 89 41.6
Eucgr.C02633 Eucalyptus grandis HOM05D000005 ORTHO05D007072 4.0e-09 67.4 88 44.3
PGR142G3278 Punica granatum HOM05D000005 ORTHO05D000012 5.3e-09 67.0 90 42.2
Eucgr.B01065 Eucalyptus grandis HOM05D000005 ORTHO05D007072 6.9e-09 66.6 89 43.8
PGR142G1752 Punica granatum HOM05D000005 ORTHO05D000012 6.9e-09 66.6 90 44.4
Eucgr.C01921 Eucalyptus grandis HOM05D000005 ORTHO05D007072 9.0e-09 66.2 89 42.7
PGR142G0924 Punica granatum HOM05D000005 ORTHO05D000012 9.0e-09 66.2 91 44.0
Eucgr.B01756 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.2e-08 65.9 90 41.1
Eucgr.L01460 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.2e-08 65.9 89 41.6
PGR042G3770 Punica granatum HOM05D000005 ORTHO05D000012 1.2e-08 65.9 88 43.2
Eucgr.C02041 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.5e-08 65.5 91 41.8
Eucgr.C02628 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.5e-08 65.5 88 43.2
Eucgr.C02641 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.5e-08 65.5 88 43.2
Eucgr.C01847 Eucalyptus grandis HOM05D000467 ORTHO05D007073 2.6e-08 64.7 93 57.0
PGR142G0661 Punica granatum HOM05D000005 ORTHO05D000012 2.6e-08 64.7 91 42.9
PGR142G0894 Punica granatum HOM05D000005 ORTHO05D000012 2.6e-08 64.7 92 41.3
Eucgr.E03556 Eucalyptus grandis HOM05D012433 ORTHO05D007072 3.4e-08 64.3 90 56.7
Eucgr.C00330 Eucalyptus grandis HOM05D000005 ORTHO05D007072 4.5e-08 63.9 86 44.2
Eucgr.F04314 Eucalyptus grandis HOM05D000005 ORTHO05D007072 4.5e-08 63.9 89 50.6
Eucgr.J01330 Eucalyptus grandis HOM05D000005 ORTHO05D007072 4.5e-08 63.9 90 41.1
PGR042G1043 Punica granatum HOM05D000005 ORTHO05D000012 4.5e-08 63.9 83 48.2
Eucgr.A00735 Eucalyptus grandis HOM05D000005 ORTHO05D000012 5.8e-08 63.5 90 45.6
Eucgr.E03184 Eucalyptus grandis HOM05D000009 ORTHO05D007072 5.8e-08 63.5 88 38.6
Eucgr.H02212 Eucalyptus grandis HOM05D000005 ORTHO05D007072 5.8e-08 63.5 88 39.8
Eucgr.J01295 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.6e-08 63.2 90 40.0
Eucgr.J01324 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.6e-08 63.2 89 40.4
PGR031G3491 Punica granatum HOM05D000005 ORTHO05D000012 7.6e-08 63.2 91 40.7
PGR142G3725 Punica granatum HOM05D000005 ORTHO05D000012 7.6e-08 63.2 90 41.1
Eucgr.G00362 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.0e-07 62.8 88 43.2
PGR119G0377 Punica granatum HOM05D000005 ORTHO05D000012 1.3e-07 62.4 93 55.9
PGR142G0294 Punica granatum HOM05D000005 ORTHO05D000012 1.3e-07 62.4 89 43.8
Eucgr.C00318 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.7e-07 62.0 86 40.7
Eucgr.C00572 Eucalyptus grandis HOM05D016032 ORTHO05D007072 1.7e-07 62.0 88 40.9
Eucgr.C02044 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.7e-07 62.0 88 40.9
Eucgr.E01863 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.7e-07 62.0 89 42.7
PGR004G0944 Punica granatum HOM05D000005 ORTHO05D000012 1.7e-07 62.0 90 40.0
Eucgr.G00358 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.2e-07 61.6 88 40.9
PGR142G3410 Punica granatum HOM05D000005 ORTHO05D000012 2.2e-07 61.6 91 41.8
PGR142G4113 Punica granatum HOM05D000005 ORTHO05D000012 2.2e-07 61.6 90 40.0
Eucgr.C01469 Eucalyptus grandis HOM05D010218 ORTHO05D007072 2.9e-07 61.2 53 58.5
Eucgr.C04267 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.9e-07 61.2 88 37.5
Eucgr.E01797 Eucalyptus grandis HOM05D000005 ORTHO05D007073 2.9e-07 61.2 89 42.7
Eucgr.C00427 Eucalyptus grandis HOM05D000005 ORTHO05D007072 4.9e-07 60.5 89 38.2
Eucgr.C02112 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.9e-07 60.5 89 39.3
Eucgr.F04313 Eucalyptus grandis HOM05D000005 ORTHO05D007072 4.9e-07 60.5 85 38.8
PGR142G2505 Punica granatum HOM05D000005 ORTHO05D000012 4.9e-07 60.5 93 40.9
Eucgr.C00467 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.5e-07 60.1 86 43.0
Eucgr.E01807 Eucalyptus grandis HOM05D000005 ORTHO05D007073 6.5e-07 60.1 89 56.2
Eucgr.E02639 Eucalyptus grandis HOM05D000005 ORTHO05D007072 6.5e-07 60.1 88 55.7
PGR042G1273 Punica granatum HOM05D000005 ORTHO05D000012 6.5e-07 60.1 53 60.4
PGR142G2658 Punica granatum HOM05D000005 ORTHO05D007072 8.4e-07 59.7 91 42.9
Eucgr.E03173 Eucalyptus grandis HOM05D000009 ORTHO05D007072 1.1e-06 59.3 86 37.2
Eucgr.C02081 Eucalyptus grandis HOM05D000005 ORTHO05D035198 1.4e-06 58.9 92 52.2
Eucgr.C02110 Eucalyptus grandis HOM05D000005 ORTHO05D007073 1.4e-06 58.9 89 53.9
Eucgr.E03203 Eucalyptus grandis HOM05D000009 ORTHO05D007072 1.4e-06 58.9 88 53.4
Nn8g40911 Nelumbo nucifera HOM05D000005 ORTHO05D000012 1.4e-06 58.9 53 56.6
PGR044G0500 Punica granatum HOM05D000005 ORTHO05D011459 1.4e-06 58.9 82 40.2
Eucgr.C00289 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.9e-06 58.5 44 72.7
Eucgr.C02865 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.9e-06 58.5 84 38.1
Eucgr.D02412 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.9e-06 58.5 90 58.9
Eucgr.E03200 Eucalyptus grandis HOM05D000009 ORTHO05D000008 1.9e-06 58.5 88 55.7
Eucgr.G00379 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.9e-06 58.5 85 40.0
Medtr8g020430 Medicago truncatula HOM05D000005 ORTHO05D000012 1.9e-06 58.5 94 47.9
Eucgr.C02655 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.5e-06 58.2 51 56.9
PGR142G3284 Punica granatum HOM05D000005 ORTHO05D000012 2.5e-06 58.2 89 42.7
PGR142G4482 Punica granatum HOM05D000005 ORTHO05D007073 2.5e-06 58.2 91 56.0
Eucgr.E03194 Eucalyptus grandis HOM05D000009 ORTHO05D007072 3.2e-06 57.8 88 38.6
PGR042G3882 Punica granatum HOM05D000005 ORTHO05D000012 3.2e-06 57.8 90 37.8
PGR044G1303 Punica granatum HOM05D000005 ORTHO05D011459 3.2e-06 57.8 83 51.8
PGR142G4010 Punica granatum HOM05D000005 ORTHO05D000012 3.2e-06 57.8 93 39.8
TAR374G1152 Trochodendron aralioides HOM05D000005 ORTHO05D000012 3.2e-06 57.8 52 55.8
Eucgr.C02650 Eucalyptus grandis HOM05D000005 ORTHO05D007072 4.2e-06 57.4 89 52.8
Eucgr.L01871 Eucalyptus grandis HOM05D000005 ORTHO05D007072 4.2e-06 57.4 89 55.1
MD02G1053100 Malus domestica HOM05D000005 ORTHO05D000012 4.2e-06 57.4 48 60.4
PGR044G0279 Punica granatum HOM05D000005 ORTHO05D000012 4.2e-06 57.4 52 57.7
PGR044G1147 Punica granatum HOM05D000005 ORTHO05D000012 4.2e-06 57.4 52 55.8
PGR044G1419 Punica granatum HOM05D000005 ORTHO05D000012 4.2e-06 57.4 52 57.7
PGR044G1867 Punica granatum HOM05D000005 ORTHO05D000012 4.2e-06 57.4 52 55.8
PGSC0003DMG401022603 Solanum tuberosum HOM05D000005 ORTHO05D000012 4.2e-06 57.4 51 51.0
TAR371G0186 Trochodendron aralioides HOM05D000005 ORTHO05D000012 4.2e-06 57.4 52 55.8
CAN.G27.62 Capsicum annuum HOM05D000005 ORTHO05D000012 5.5e-06 57.0 52 50.0
Eucgr.C00276 Eucalyptus grandis HOM05D000005 ORTHO05D007072 5.5e-06 57.0 86 36.0
MD00G1028000 Malus domestica HOM05D000005 ORTHO05D000012 5.5e-06 57.0 87 39.1
Potri.013G037599 Populus trichocarpa HOM05D000005 ORTHO05D000012 5.5e-06 57.0 49 53.1
PGR044G0375 Punica granatum HOM05D000005 ORTHO05D000012 5.5e-06 57.0 52 55.8
PGR102G3323 Punica granatum HOM05D000005 ORTHO05D000012 5.5e-06 57.0 89 39.3
PGR142G2594 Punica granatum HOM05D000005 ORTHO05D000012 5.5e-06 57.0 89 33.7
THA.LOC104822077 Tarenaya hassleriana HOM05D000005 ORTHO05D000012 5.5e-06 57.0 53 50.9
Eucgr.C02040 Eucalyptus grandis HOM05D000005 ORTHO05D007072 7.1e-06 56.6 88 37.5
Eucgr.C02087 Eucalyptus grandis HOM05D000005 ORTHO05D007072 7.1e-06 56.6 92 51.1
PGR142G2685 Punica granatum HOM05D000005 ORTHO05D000012 7.1e-06 56.6 89 36.0
Solyc09g092410.4 Solanum lycopersicum HOM05D000005 ORTHO05D000012 7.1e-06 56.6 49 55.1
Actinidia00144 Actinidia chinensis HOM05D000005 ORTHO05D000012 9.3e-06 56.2 49 55.1
Lj7A476T49 Lonicera japonica HOM05D000005 ORTHO05D007073 9.3e-06 56.2 48 58.3
Potri.019G018800 Populus trichocarpa HOM05D000005 ORTHO05D000012 9.3e-06 56.2 48 54.2
Prupe.1G263600 Prunus persica HOM05D000005 ORTHO05D000012 9.3e-06 56.2 53 50.9


User provided reference genes

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