Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 2.6e-151 538.9 314 100.0
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 2.5e-93 346.3 312 63.5
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 2.3e-91 339.7 320 62.5
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 5.2e-91 338.6 312 61.5
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 5.4e-88 328.6 317 58.4
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 9.2e-88 327.8 316 58.5
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 7.8e-87 324.7 324 59.0
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 1.9e-85 320.1 325 60.9
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 1.2e-84 317.4 324 59.6
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 8.1e-84 314.7 294 58.8
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 5.2e-83 312.0 328 57.9
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 6.8e-83 311.6 324 61.4
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 6.8e-83 311.6 332 56.0
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 8.9e-83 311.2 321 56.7
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 8.9e-83 311.2 311 62.4
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 4.4e-82 308.9 308 60.1
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 7.5e-82 308.1 308 58.4
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 9.8e-82 307.8 318 57.5
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 1.3e-81 307.4 302 59.6
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 8.3e-81 304.7 309 59.5
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 8.3e-81 304.7 302 59.3
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 1.1e-80 304.3 301 62.5
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 1.9e-80 303.5 308 57.1
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 2.4e-80 303.1 296 59.8
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 4.1e-80 302.4 305 62.0
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 7.1e-80 301.6 302 58.3
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 9.2e-80 301.2 305 62.0
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 9.2e-80 301.2 319 55.8
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 7.8e-79 298.1 321 56.4
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 3.9e-78 295.8 331 62.2
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 8.6e-78 294.7 317 54.9
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 8.6e-78 294.7 300 57.3
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 1.9e-77 293.5 326 58.3
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 2.5e-77 293.1 325 60.9
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 4.3e-77 292.4 324 57.7
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.2e-76 290.8 292 58.2
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 1.2e-76 290.8 354 50.8
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 3.6e-76 289.3 337 56.1
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 6.2e-76 288.5 329 54.4
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 1.4e-75 287.3 347 51.6
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 2.3e-75 286.6 332 55.7
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 4.0e-75 285.8 345 50.1
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 5.2e-75 285.4 314 53.2
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 6.8e-75 285.0 331 55.3
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 1.5e-74 283.9 331 55.0
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.5e-74 283.9 301 55.1
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 2.0e-74 283.5 352 50.6
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 2.6e-74 283.1 274 59.9
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 3.4e-74 282.7 312 54.2
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 7.6e-74 281.6 312 60.3
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 9.9e-74 281.2 313 59.7
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.7e-73 280.4 326 60.4
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 3.7e-73 279.3 329 50.8
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 6.4e-73 278.5 331 52.3
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 8.4e-73 278.1 312 53.2
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.1e-72 277.7 321 59.8
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 1.9e-72 276.9 321 62.0
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 3.2e-72 276.2 321 61.4
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 4.1e-72 275.8 315 62.9
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 7.8e-71 271.6 330 55.8
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 7.8e-71 271.6 321 52.3
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 1.0e-70 271.2 320 56.2
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 1.3e-70 270.8 335 53.1
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 5.1e-70 268.9 342 50.0
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 1.1e-69 267.7 320 58.8
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 1.5e-69 267.3 315 51.4
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 1.9e-69 266.9 316 53.2
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 1.9e-69 266.9 316 50.9
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 2.5e-69 266.5 339 49.6
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 1.2e-68 264.2 318 54.1
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 1.6e-68 263.8 320 51.2
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 1.4e-67 260.8 280 58.2
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 1.4e-67 260.8 335 48.1
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 5.2e-67 258.8 341 51.3
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 8.9e-67 258.1 209 70.3
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 8.9e-67 258.1 335 54.0
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 1.2e-66 257.7 348 49.4
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 1.5e-66 257.3 323 54.2
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 4.4e-66 255.8 280 54.6
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 9.9e-66 254.6 346 48.0
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 1.7e-65 253.8 324 54.0
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 2.2e-65 253.4 344 56.4
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 2.9e-65 253.1 208 65.9
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 3.8e-65 252.7 346 46.8
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 1.1e-64 251.1 320 49.1
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 1.4e-64 250.8 205 65.4
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 1.4e-64 250.8 352 48.3
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 1.9e-64 250.4 307 50.2
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 1.9e-64 250.4 316 53.8
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 3.2e-64 249.6 375 46.4
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 3.2e-64 249.6 289 51.9
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 2.7e-63 246.5 322 48.8
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 1.0e-62 244.6 331 50.2
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 1.3e-62 244.2 312 54.2
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 4.3e-61 239.2 313 52.4
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 1.3e-60 237.7 300 49.0
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 2.1e-60 236.9 267 56.6
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 3.6e-60 236.1 292 54.8
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 3.6e-60 236.1 326 45.7
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 4.8e-60 235.7 278 57.9
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 8.1e-60 235.0 240 55.4
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 8.1e-60 235.0 191 68.6
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 5.3e-59 232.3 492 39.8
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 9.0e-59 231.5 206 61.7
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.7e-57 227.3 322 48.8
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 4.9e-57 225.7 172 72.1
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.4e-56 224.2 297 53.5
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 7.1e-56 221.9 289 49.1
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 1.3e-54 217.6 245 55.9
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 1.1e-53 214.5 363 47.1
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 1.3e-52 211.1 218 55.5
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 1.6e-52 210.7 260 51.2
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 1.9e-48 197.2 332 41.6
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.9e-48 197.2 324 46.3
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 4.6e-47 192.6 321 45.5
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 7.9e-47 191.8 147 70.1
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 1.8e-46 190.7 214 55.6
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 6.7e-46 188.7 324 42.9
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 7.4e-45 185.3 274 47.8
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 4.8e-44 182.6 201 54.2
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 2.1e-39 167.2 113 77.0
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 4.3e-37 159.5 115 73.0
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 2.1e-36 157.1 279 39.1
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 5.3e-35 152.5 111 73.9
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 2.1e-31 140.6 150 56.0
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 7.9e-31 138.7 183 50.3
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 1.0e-30 138.3 221 44.8
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 3.7e-28 129.8 115 67.0
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 1.5e-26 124.4 202 42.6
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 3.7e-20 103.2 105 56.2
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 9.1e-19 98.6 68 70.6
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 1.2e-18 98.2 175 39.4
QL03p064628 Quercus lobata HOM05D005155 ORTHO05D006266 1.0e-17 95.1 317 34.1
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 5.0e-17 92.8 217 38.2
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 8.5e-17 92.0 186 37.6
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 8.5e-17 92.0 186 37.6
MD17G1119400 Malus domestica HOM05D005155 ORTHO05D006266 3.6e-15 86.7 81 61.7
Cc00_g29960 Coffea canephora HOM05D005155 ORTHO05D006266 6.7e-14 82.4 89 55.1
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 2.0e-10 70.9 157 38.2
A02p30930 Brassica napus HOM05D005155 ORTHO05D006266 1.9e-08 64.3 66 54.5
Lj1A800T39 Lonicera japonica HOM05D005155 ORTHO05D006266 1.9e-08 64.3 53 71.7
QL03p064635 Quercus lobata HOM05D005155 ORTHO05D006266 3.6e-07 60.1 61 62.3


User provided reference genes

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