Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 8.4e-208 726.9 387 100.0
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.0e-148 529.6 296 95.9
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.3e-146 521.5 296 94.9
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.2e-145 520.4 296 94.9
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.6e-132 476.1 263 96.2
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.1e-113 413.3 223 97.3
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 1.2e-84 317.8 232 72.0
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 3.4e-84 316.2 335 58.8
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 5.8e-84 315.5 313 59.1
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 2.2e-83 313.5 352 55.4
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 9.3e-82 308.1 237 66.7
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 1.3e-78 297.7 317 58.0
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 1.6e-78 297.4 246 65.9
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 8.1e-78 295.0 320 57.2
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 1.4e-77 294.3 336 54.5
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 3.1e-77 293.1 312 56.4
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 2.0e-76 290.4 266 61.7
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 2.6e-76 290.0 238 66.8
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 4.5e-76 289.3 241 63.9
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 4.5e-76 289.3 349 52.4
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 5.8e-76 288.9 387 49.4
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 9.9e-76 288.1 319 55.5
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 2.9e-75 286.6 395 48.4
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 8.4e-75 285.0 377 49.9
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.1e-74 284.6 315 54.6
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 1.1e-74 284.6 393 50.4
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 1.9e-74 283.9 265 60.8
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.2e-74 283.1 315 54.3
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.2e-74 283.1 315 54.3
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 4.2e-74 282.7 265 61.9
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 7.1e-74 282.0 307 55.4
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 1.2e-73 281.2 225 65.8
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.1e-73 280.4 315 53.7
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 2.7e-73 280.0 393 46.8
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 3.5e-73 279.6 394 48.2
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 4.6e-73 279.3 239 64.0
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 6.0e-73 278.9 328 53.0
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 1.0e-72 278.1 364 48.9
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 1.0e-72 278.1 248 59.3
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 1.8e-72 277.3 300 55.0
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 3.0e-72 276.6 407 47.4
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 5.1e-72 275.8 298 56.4
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 5.1e-72 275.8 228 64.5
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 5.1e-72 275.8 337 52.8
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 6.7e-72 275.4 385 47.0
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 8.7e-72 275.0 375 48.5
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 8.7e-72 275.0 270 57.0
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 2.5e-71 273.5 270 57.0
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 4.3e-71 272.7 231 63.2
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 4.3e-71 272.7 372 48.4
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 5.6e-71 272.3 395 45.8
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 5.6e-71 272.3 320 54.1
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 1.6e-70 270.8 330 52.7
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 2.8e-70 270.0 262 61.1
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 3.7e-70 269.6 292 57.5
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 3.7e-70 269.6 384 49.2
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 6.2e-70 268.9 395 46.1
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 8.2e-70 268.5 227 65.2
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 4.0e-69 266.2 266 57.9
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 2.6e-68 263.5 344 50.0
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 2.2e-67 260.4 337 49.9
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 2.2e-67 260.4 366 47.0
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 2.2e-67 260.4 266 57.5
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 1.1e-66 258.1 261 55.2
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.9e-66 257.3 298 53.7
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 6.0e-65 252.3 343 46.4
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 1.0e-64 251.5 220 63.6
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 2.3e-64 250.4 245 54.7
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 3.9e-64 249.6 231 58.9
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 1.9e-63 247.3 200 63.5
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 3.3e-63 246.5 231 61.9
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 4.3e-63 246.1 224 58.9
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 2.2e-62 243.8 186 66.7
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 2.8e-62 243.4 296 52.0
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 8.2e-62 241.9 286 50.3
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 1.1e-61 241.5 199 63.8
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.1e-61 241.5 266 52.6
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 2.4e-61 240.4 198 64.6
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 2.4e-61 240.4 266 52.3
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 3.1e-61 240.0 327 48.6
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 5.3e-61 239.2 298 52.0
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 6.9e-61 238.8 235 57.0
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 2.0e-60 237.3 298 51.0
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 5.9e-60 235.7 192 65.1
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 1.3e-59 234.6 237 55.7
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 2.2e-59 233.8 218 58.7
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 3.8e-59 233.0 263 49.8
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 1.1e-58 231.5 204 59.8
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 1.4e-58 231.1 197 62.4
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 2.5e-58 230.3 218 57.3
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 2.5e-58 230.3 218 57.3
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 2.7e-57 226.9 218 56.4
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 3.3e-55 219.9 227 55.1
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 9.7e-55 218.4 320 45.3
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 6.3e-54 215.7 260 50.0
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.4e-50 204.5 229 52.8
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 7.2e-50 202.2 306 46.1
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 7.9e-49 198.7 166 66.3
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 6.7e-48 195.7 326 39.6
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.5e-47 194.5 155 68.4
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 9.7e-47 191.8 188 59.6
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.7e-46 191.0 253 47.8
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 3.5e-44 183.3 184 56.0
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 8.8e-40 168.7 336 41.1
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.1e-39 168.3 109 88.1
Eucgr.A01942 Eucalyptus grandis HOM05D005898 ORTHO05D007493 1.8e-37 161.0 101 89.1
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 2.4e-37 160.6 206 43.2
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.0e-32 145.2 194 46.9
Eucgr.J01273 Eucalyptus grandis HOM05D005898 ORTHO05D007493 2.3e-32 144.1 101 82.2
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 2.0e-31 141.0 254 43.3
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 1.8e-29 134.4 99 67.7
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 4.1e-29 133.3 181 49.2
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.6e-28 131.3 174 51.7
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 3.5e-28 130.2 180 48.3
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 4.2e-26 123.2 260 40.8
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 1.4e-21 108.2 170 33.5
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 6.6e-19 99.4 223 30.9
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 1.5e-18 98.2 61 78.7
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 1.8e-13 81.3 74 60.8
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 2.7e-12 77.4 183 36.1
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 3.5e-12 77.0 56 66.1
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 3.6e-09 67.0 166 31.3
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 5.2e-08 63.2 171 39.2
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 6.4e-06 56.2 115 39.1


User provided reference genes

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