Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K01278 Eucalyptus grandis HOM05D006727 ORTHO05D008408 6.9e-133 477.2 232 100.0
PGR004G2541 Punica granatum HOM05D006727 ORTHO05D008408 5.4e-101 371.3 232 76.7
Manes.09G116800 Manihot esculenta HOM05D006727 ORTHO05D008408 7.2e-98 360.9 210 80.0
Gorai.011G128700 Gossypium raimondii HOM05D006727 ORTHO05D008408 1.8e-96 356.3 212 79.7
COL.COLO4_16540 Corchorus olitorius HOM05D006727 ORTHO05D008408 2.3e-96 355.9 212 78.3
MD04G1172900 Malus domestica HOM05D006727 ORTHO05D008408 4.0e-96 355.1 226 75.2
Gohir.A10G149900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 5.2e-96 354.8 212 79.2
Gohir.D10G116900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 8.8e-96 354.0 212 79.2
Duzib212G0227 Durio zibethinus HOM05D006727 ORTHO05D008408 2.0e-95 352.8 213 77.9
MD12G1186200 Malus domestica HOM05D006727 ORTHO05D008408 2.0e-95 352.8 224 75.4
QL07p032522 Quercus lobata HOM05D006727 ORTHO05D008408 2.6e-95 352.4 211 76.8
Thecc.04G153700 Theobroma cacao HOM05D006727 ORTHO05D008408 2.6e-95 352.4 215 77.7
Dinv11373 Davidia involucrata HOM05D006727 ORTHO05D008408 4.4e-95 351.7 210 77.6
Cfa017053 Carpinus fangiana HOM05D006727 ORTHO05D008408 5.7e-95 351.3 224 75.4
GSVIVG01030200001 Vitis vinifera HOM05D006727 ORTHO05D008408 5.7e-95 351.3 214 77.1
FAN14G1566 Fragaria x ananassa HOM05D006727 ORTHO05D008408 9.8e-95 350.5 224 74.1
Hund03725 Selenicereus undatus HOM05D006727 ORTHO05D008408 1.3e-94 350.1 225 73.8
CSS0002185 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 4.9e-94 348.2 214 75.7
FvH4_6g10100 Fragaria vesca HOM05D006727 ORTHO05D008408 4.9e-94 348.2 224 74.1
TWI53G1665 Tripterygium wilfordii HOM05D006727 ORTHO05D008408 8.3e-94 347.4 221 72.4
FAN02G0358 Fragaria x ananassa HOM05D006727 ORTHO05D008408 1.8e-93 346.3 224 73.2
Prupe.6G291700 Prunus persica HOM05D006727 ORTHO05D008408 2.4e-93 345.9 223 74.4
CSS0012941 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 3.1e-93 345.5 214 74.8
Dinv25328 Davidia involucrata HOM05D006727 ORTHO05D008408 3.1e-93 345.5 210 77.1
Cc06_g00470 Coffea canephora HOM05D006727 ORTHO05D008408 5.4e-93 344.7 198 78.8
CANSAT35G0523 Cannabis sativa HOM05D006727 ORTHO05D008408 7.0e-93 344.4 214 74.8
FAN05G1856 Fragaria x ananassa HOM05D006727 ORTHO05D008408 1.2e-92 343.6 224 72.8
Potri.016G134700 Populus trichocarpa HOM05D006727 ORTHO05D008408 1.6e-92 343.2 204 76.0
RcHm_v2.0_Chr3g0460801 Rosa chinensis HOM05D006727 ORTHO05D008408 2.7e-92 342.4 224 74.1
FAN05G4632 Fragaria x ananassa HOM05D006727 ORTHO05D008408 4.5e-92 341.7 224 72.8
CiPaw.09G219900 Carya illinoinensis HOM05D006727 ORTHO05D008408 1.0e-91 340.5 223 73.1
TPR.G26930 Trifolium pratense HOM05D006727 ORTHO05D008408 1.0e-91 340.5 215 72.6
TAR220G0001 Trochodendron aralioides HOM05D006727 ORTHO05D008408 1.3e-91 340.1 213 75.6
Psat3g120440 Pisum sativum HOM05D006727 ORTHO05D008408 1.7e-91 339.7 216 73.1
Peaxi162Scf00732g00434 Petunia axillaris HOM05D006727 ORTHO05D008408 2.9e-91 339.0 213 73.2
Aqoxy4G02378 Aquilegia oxysepala HOM05D006727 ORTHO05D008408 3.8e-91 338.6 218 73.4
Migut.J00054 Erythranthe guttata HOM05D006727 ORTHO05D008408 3.8e-91 338.6 214 73.4
Glyma.18G215000 Glycine max HOM05D006727 ORTHO05D008408 3.8e-91 338.6 214 74.8
Lalb_Chr19g0124021 Lupinus albus HOM05D006727 ORTHO05D008408 3.8e-91 338.6 212 75.0
Nitab4.5_0000950g0010 Nicotiana tabacum HOM05D006727 ORTHO05D008408 5.0e-91 338.2 218 71.6
SGA_v2.0_scaffold373G50173 Striga asiatica HOM05D006727 ORTHO05D008408 1.1e-90 337.0 213 73.7
Atru.chr8.2386 Acer truncatum HOM05D006727 ORTHO05D008408 1.5e-90 336.7 213 73.2
Lj1g0012647 Lotus japonicus HOM05D006727 ORTHO05D008408 1.5e-90 336.7 207 73.9
Phvul.008G083900 Phaseolus vulgaris HOM05D006727 ORTHO05D008408 1.9e-90 336.3 216 75.5
Zm00001eb281990 Zea mays HOM05D006727 ORTHO05D008408 1.9e-90 336.3 215 73.0
Lsat_1_v5_gn_5_150061 Lactuca sativa HOM05D006727 ORTHO05D008408 2.5e-90 335.9 213 74.2
Medtr7g072680 Medicago truncatula HOM05D006727 ORTHO05D008408 3.3e-90 335.5 204 75.0
CsaV3_3G033190 Cucumis sativus L. HOM05D006727 ORTHO05D008408 4.3e-90 335.1 217 73.7
Sc19g0002650 Simmondsia chinensis HOM05D006727 ORTHO05D008408 4.3e-90 335.1 222 69.8
MELO3C009112.2 Cucumis melo HOM05D006727 ORTHO05D008408 7.3e-90 334.3 218 73.9
THA.LOC104823356 Tarenaya hassleriana HOM05D006727 ORTHO05D008408 9.5e-90 334.0 203 74.4
Rhsim05G0229700 Rhododendron simsii HOM05D006727 ORTHO05D008408 1.6e-89 333.2 222 70.7
ECA248G2137 Erigeron canadensis HOM05D006727 ORTHO05D008408 2.1e-89 332.8 212 73.1
arahy.Tifrunner.gnm1.ann1.U8U4T8 Arachis hypogaea HOM05D006727 ORTHO05D008408 2.8e-89 332.4 231 68.4
arahy.Tifrunner.gnm1.ann1.SP3HKJ Arachis hypogaea HOM05D006727 ORTHO05D008408 3.6e-89 332.0 231 68.4
HanXRQChr01g0000191 Helianthus annuus HOM05D006727 ORTHO05D008408 3.6e-89 332.0 214 72.0
Ciclev10012697m.g Citrus clementina HOM05D006727 ORTHO05D008408 4.7e-89 331.6 210 73.8
PSO017G7044 Papaver somniferum HOM05D006727 ORTHO05D008408 8.0e-89 330.9 217 70.5
Glyma.09G276200 Glycine max HOM05D006727 ORTHO05D008408 1.0e-88 330.5 214 72.9
Sabra04G0152100 Salix brachista HOM05D006727 ORTHO05D008408 1.0e-88 330.5 225 68.9
EL10Ac7g17073 Beta vulgaris HOM05D006727 ORTHO05D008408 8.9e-88 327.4 222 69.8
Sed0012883 Sechium edule HOM05D006727 ORTHO05D008408 8.9e-88 327.4 219 70.8
MSTRG.18948 Avicennia marina HOM05D006727 ORTHO05D008408 1.2e-87 327.0 213 71.8
Os05g0168400 Oryza sativa ssp. japonica HOM05D006727 ORTHO05D008408 8.3e-86 320.9 232 65.5
HPP92_001138 Vanilla planifolia HOM05D006727 ORTHO05D008408 1.4e-85 320.1 222 66.7
Aa31sc296G30 Aethionema arabicum HOM05D006727 ORTHO05D008408 3.9e-83 312.0 211 70.6
CARHR161200 Cardamine hirsuta HOM05D006727 ORTHO05D008408 9.5e-82 307.4 213 68.1
Haze_21159 Corylus avellana HOM05D006727 ORTHO05D008408 2.8e-81 305.8 176 81.2
Thhalv10010694m.g Eutrema salsugineum HOM05D006727 ORTHO05D008408 8.0e-81 304.3 212 67.9
Ah.15g090120 Amaranthus hybridus HOM05D006727 ORTHO05D008408 1.1e-80 303.9 213 70.4
BcaNung00375 Brassica carinata HOM05D006727 ORTHO05D008408 1.1e-80 303.9 212 67.9
AL5G32050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 1.8e-80 303.1 201 69.7
BcaC09g50100 Brassica carinata HOM05D006727 ORTHO05D008408 1.8e-80 303.1 212 67.9
BolC1t02827H Brassica oleracea HOM05D006727 ORTHO05D008408 1.8e-80 303.1 212 67.9
AT3G51610 Arabidopsis thaliana HOM05D006727 ORTHO05D008408 2.3e-80 302.8 201 69.7
C01p28960 Brassica napus HOM05D006727 ORTHO05D008408 3.1e-80 302.4 212 67.5
A01p23320 Brassica napus HOM05D006727 ORTHO05D008408 2.0e-79 299.7 215 67.4
BraA01t02241Z Brassica rapa HOM05D006727 ORTHO05D008408 2.0e-79 299.7 215 67.4
Carub.0005s1797 Capsella rubella HOM05D006727 ORTHO05D008408 4.4e-79 298.5 213 67.6
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 8.3e-78 294.3 190 67.9
CDE04G1801 Ceratophyllum demersum HOM05D006727 ORTHO05D008408 2.4e-77 292.7 183 68.9
vmacro20362 Vaccinium macrocarpon HOM05D006727 ORTHO05D008408 5.4e-77 291.6 226 62.8
PSO170G4157 Papaver somniferum HOM05D006727 ORTHO05D008408 3.5e-76 288.9 176 74.4
Oeu026955.4 Olea europaea HOM05D006727 ORTHO05D008408 1.7e-75 286.6 249 57.4
Nn2g10333 Nelumbo nucifera HOM05D006727 ORTHO05D008408 8.9e-72 274.2 163 74.2
Mapoly0003s0079 Marchantia polymorpha HOM05D006727 ORTHO05D008408 3.7e-70 268.9 214 57.0
unitig_749.g14090 Utricularia gibba HOM05D006727 ORTHO05D008408 1.4e-69 266.9 192 65.1
Sp5g10660 Schrenkiella parvula HOM05D006727 ORTHO05D008408 3.2e-69 265.8 179 68.7
TAR623G1271 Trochodendron aralioides HOM05D006727 ORTHO05D008408 3.6e-65 252.3 214 63.1
SMO356G0277 Selaginella moellendorffii HOM05D006727 ORTHO05D008408 4.0e-64 248.8 196 55.1
FAN09G3050 Fragaria x ananassa HOM05D006727 ORTHO05D008408 1.3e-62 243.8 170 66.5
CAN.G119.2 Capsicum annuum HOM05D006727 ORTHO05D008408 7.8e-60 234.6 151 66.9
Pp3c2_32200 Physcomitrium patens HOM05D006727 ORTHO05D008408 1.3e-59 233.8 217 51.6
ClCG10G022640 Citrullus lanatus HOM05D006727 ORTHO05D008408 2.3e-59 233.0 219 58.4
Nitab4.5_0000330g0040 Nicotiana tabacum HOM05D006727 ORTHO05D008408 3.9e-59 232.3 140 77.9
AUR62006372 Chenopodium quinoa HOM05D006727 ORTHO05D008408 7.3e-58 228.0 222 54.1
Ca_07756_v3 Cicer arietinum L. HOM05D006727 ORTHO05D008408 1.6e-52 210.3 150 66.7
Actinidia20787 Actinidia chinensis HOM05D006727 ORTHO05D008408 6.0e-52 208.4 127 71.7
SHI12925 Sapria himalayana HOM05D006727 ORTHO05D008408 4.5e-47 192.2 135 68.9
Sopen03g037430 Solanum pennellii HOM05D006727 ORTHO05D008408 1.0e-43 181.0 115 73.0
AagrBONN_evm.TU.Sc2ySwM_344.2624 Anthoceros agrestis HOM05D006727 ORTHO05D008408 5.1e-43 178.7 140 51.4
Cre01.g049450 Chlamydomonas reinhardtii HOM05D006727 ORTHO05D008408 4.0e-40 169.1 206 38.3
Oeu060435.2 Olea europaea HOM05D006727 ORTHO05D008408 5.5e-37 158.7 105 66.7
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 1.9e-34 150.2 236 33.9
BraA09t39934Z Brassica rapa HOM05D006727 ORTHO05D008408 8.2e-33 144.8 128 57.8
A09p44730 Brassica napus HOM05D006727 ORTHO05D008408 6.9e-32 141.7 128 55.5
AagrBONN_evm.TU.Sc2ySwM_344.2622 Anthoceros agrestis HOM05D006727 ORTHO05D008408 7.9e-28 128.3 92 54.3
MCO09G625 Micromonas commoda HOM05D006727 ORTHO05D008408 1.1e-26 124.4 169 33.7
Solyc03g118520.4 Solanum lycopersicum HOM05D006727 ORTHO05D008408 1.3e-25 120.9 84 61.9
Sopen03g037400 Solanum pennellii HOM05D006727 ORTHO05D008408 2.0e-23 113.6 79 62.0
PSO017G2966 Papaver somniferum HOM05D004863 ORTHO05D005802 1.4e-19 100.9 64 65.6
SEGI_08771 Sequoiadendron giganteum HOM05D006727 ORTHO05D008408 3.0e-19 99.8 73 56.2
BolC8t50296H Brassica oleracea HOM05D006727 ORTHO05D008408 2.6e-15 86.7 71 60.6
AL1G25050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 5.9e-15 85.5 65 61.5
AL8G15680 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 1.3e-14 84.3 52 67.3
CBR_g50885 Chara braunii HOM05D006727 ORTHO05D008408 1.7e-14 84.0 141 34.0
Carub.0007s3202 Capsella rubella HOM05D006727 ORTHO05D008408 2.1e-12 77.0 58 75.9
MD12G1088300 Malus domestica HOM05D006727 ORTHO05D008408 1.1e-10 71.2 69 53.6
BcaB01g00436 Brassica carinata HOM05D006727 ORTHO05D008408 2.9e-06 56.6 73 50.7
A03p48380 Brassica napus HOM05D023373 ORTHO05D024557 8.5e-06 55.1 97 39.2


User provided reference genes

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