Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 0.0e+00 1690.2 898 100.0
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 0.0e+00 1084.3 889 67.7
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 8.2e-307 1057.0 887 66.0
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 1.5e-305 1052.7 888 67.0
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 6.1e-302 1040.8 889 65.2
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 1.4e-301 1039.6 887 65.2
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 3.7e-299 1031.6 894 63.6
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 5.9e-297 1024.2 889 64.5
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 2.7e-294 1015.4 893 63.6
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 1.1e-292 1010.0 887 64.0
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 7.0e-290 1000.7 889 63.7
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 7.0e-290 1000.7 895 64.0
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 5.9e-289 997.7 894 61.6
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 7.7e-289 997.3 894 61.6
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 2.2e-288 995.7 888 62.8
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 5.0e-288 994.6 888 63.9
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 2.1e-286 989.2 887 63.6
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 1.4e-285 986.5 893 62.6
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 2.6e-284 982.2 893 62.5
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 5.5e-279 964.5 888 61.9
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 2.6e-276 955.7 889 61.5
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 1.3e-275 953.4 897 59.3
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 6.3e-275 951.0 902 59.0
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 3.5e-273 945.3 892 61.0
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 4.5e-273 944.9 893 62.5
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.7e-272 943.0 893 62.2
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 2.3e-272 942.6 890 61.7
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.5e-271 939.9 892 62.3
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 1.9e-271 939.5 888 61.1
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 1.9e-271 939.5 889 60.2
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.2e-270 936.8 890 61.0
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.6e-270 936.4 901 62.2
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 2.1e-270 936.0 901 62.3
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 2.3e-269 932.6 892 58.7
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 3.0e-269 932.2 862 64.5
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 1.2e-268 930.2 892 58.6
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 3.7e-267 925.2 901 61.8
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 4.6e-265 918.3 895 59.1
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 5.0e-264 914.8 902 60.9
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 2.5e-263 912.5 893 58.0
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 4.3e-263 911.8 902 59.5
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.0e-261 907.1 896 58.9
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 3.1e-261 905.6 889 58.9
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 1.3e-259 900.2 891 59.1
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 1.9e-258 896.3 891 58.8
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 2.4e-258 896.0 898 58.1
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 2.4e-258 896.0 775 66.1
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 4.1e-258 895.2 887 59.5
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 4.1e-258 895.2 889 60.3
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 7.0e-258 894.4 888 60.5
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 9.2e-258 894.0 799 63.7
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 1.2e-257 893.6 898 58.0
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 1.6e-257 893.3 882 57.3
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 1.6e-254 883.2 885 59.3
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 1.6e-254 883.2 891 59.3
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 3.6e-254 882.1 905 59.0
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 1.4e-253 880.2 904 59.1
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 4.0e-253 878.6 905 58.1
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 1.2e-252 877.1 904 59.0
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 1.2e-252 877.1 889 59.3
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 1.5e-252 876.7 905 58.0
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 2.0e-252 876.3 859 59.8
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 1.6e-249 866.7 897 59.5
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 6.6e-248 861.3 889 57.9
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 1.6e-246 856.7 861 59.5
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 1.4e-245 853.6 905 58.2
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 5.2e-245 851.7 887 57.5
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 1.5e-244 850.1 889 57.5
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 3.4e-244 849.0 794 61.7
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 1.3e-243 847.0 794 61.6
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 6.4e-243 844.7 888 58.1
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 1.6e-241 840.1 873 57.0
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 4.6e-241 838.6 901 56.0
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 7.8e-241 837.8 875 58.9
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 3.9e-240 835.5 896 55.7
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 5.6e-239 831.6 860 56.7
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 1.2e-238 830.5 883 57.6
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 6.2e-238 828.2 889 54.1
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 8.1e-238 827.8 897 54.1
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 4.4e-236 822.0 884 56.8
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 4.2e-234 815.5 900 54.7
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 9.3e-234 814.3 859 55.6
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 1.2e-233 813.9 862 56.8
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 6.0e-233 811.6 891 54.4
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 3.9e-232 808.9 891 56.2
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 6.6e-232 808.1 893 54.3
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 5.8e-228 795.0 909 54.1
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 1.3e-227 793.9 895 55.0
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 6.0e-225 785.0 895 55.1
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 6.7e-224 781.6 889 55.9
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 3.1e-221 772.7 897 55.7
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 2.6e-220 769.6 898 51.1
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.7e-219 766.9 890 52.8
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 9.3e-218 761.1 899 54.6
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 9.3e-218 761.1 870 55.2
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 8.7e-216 754.6 875 53.1
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 2.5e-215 753.1 876 55.1
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 6.2e-214 748.4 860 53.4
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 8.1e-214 748.0 863 53.8
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.1e-213 747.7 784 55.4
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 4.5e-212 742.3 889 50.3
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 2.9e-211 739.6 878 54.3
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 6.5e-211 738.4 878 54.2
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 6.0e-209 731.9 863 55.6
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 8.7e-208 728.0 856 53.7
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 2.5e-207 726.5 841 54.6
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 4.8e-206 722.2 877 52.6
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 9.0e-205 718.0 881 52.1
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 1.9e-199 700.3 881 51.5
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 3.1e-197 693.0 892 51.6
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 4.2e-194 682.6 886 48.9
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 2.1e-193 680.2 874 48.9
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 7.9e-193 678.3 876 47.8
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 1.8e-192 677.2 843 48.5
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 1.1e-191 674.5 861 51.5
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 2.4e-189 666.8 719 58.3
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 4.1e-189 666.0 840 50.8
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 1.5e-188 664.1 844 50.7
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 3.8e-187 659.4 868 47.9
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 3.2e-186 656.4 861 51.2
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 9.4e-186 654.8 874 49.7
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 2.3e-184 650.2 842 51.7
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 5.2e-184 649.0 888 49.3
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 3.3e-183 646.4 803 52.6
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 6.3e-182 642.1 874 49.2
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 6.3e-182 642.1 875 49.6
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 7.0e-181 638.6 873 48.7
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 4.5e-180 636.0 854 48.6
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 1.3e-179 634.4 859 49.2
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 1.3e-179 634.4 859 49.2
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 4.2e-178 629.4 893 46.6
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 1.3e-174 617.8 900 46.8
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 7.0e-173 612.1 877 47.3
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 7.0e-173 612.1 900 46.4
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 5.9e-172 609.0 881 47.8
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 6.1e-169 599.0 903 46.8
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 2.0e-167 594.0 927 46.9
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 9.8e-167 591.7 874 48.1
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 2.9e-163 580.1 903 46.8
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 3.2e-162 576.6 910 46.2
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 3.6e-161 573.2 897 44.4
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 3.6e-161 573.2 746 49.9
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 2.6e-159 567.0 743 50.5
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 1.0e-155 555.1 772 45.6
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 2.9e-150 537.0 833 46.7
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 4.3e-146 523.1 830 44.2
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 1.5e-138 498.0 747 46.5
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 1.5e-135 488.0 878 42.5
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 3.0e-131 473.8 894 42.5
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 6.8e-128 462.6 906 41.4
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 4.4e-127 459.9 454 62.8
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 7.8e-116 422.5 906 39.7
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 4.3e-114 416.8 654 48.8
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 6.9e-112 409.5 917 38.8
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 1.2e-111 408.7 915 39.5
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 4.5e-111 406.8 905 39.7
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 9.9e-103 379.0 907 39.0
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.7e-102 378.3 307 68.1
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 2.9e-102 377.5 905 38.2
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 8.4e-102 375.9 896 37.1
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 7.1e-101 372.9 905 35.8
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 7.1e-101 372.9 629 47.5
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 3.6e-84 317.4 861 35.3
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 2.2e-81 308.1 917 34.4
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 8.5e-78 296.2 1006 34.0
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 1.1e-72 279.3 301 49.2
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 1.4e-69 268.9 422 47.4
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 3.7e-65 254.2 378 46.6
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 3.2e-61 241.1 295 47.1
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 7.5e-58 229.9 1017 31.9
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 5.0e-54 217.2 512 36.1
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 1.9e-53 215.3 256 48.4
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 1.9e-53 215.3 361 40.4
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 3.2e-53 214.5 357 39.2
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.8e-51 208.8 943 31.6
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 5.9e-47 193.7 330 38.5
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.9e-45 188.7 307 39.4
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 6.1e-44 183.7 287 54.0
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 3.0e-43 181.4 253 42.7
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 5.9e-39 167.2 97 87.6
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.2e-36 159.5 181 50.3
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 8.0e-36 156.8 290 35.9
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 4.6e-23 114.4 155 45.8


User provided reference genes

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