Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K01172 Eucalyptus grandis HOM05D006851 ORTHO05D008844 2.0e-62 242.3 121 100.0
PGR142G1684 Punica granatum HOM05D006851 ORTHO05D008844 1.2e-14 83.6 81 63.0
GSVIVG01020766001 Vitis vinifera HOM05D006851 ORTHO05D008844 4.9e-13 78.2 82 61.0
CANSAT64G1521 Cannabis sativa HOM05D006851 ORTHO05D008844 1.3e-10 70.1 92 48.9
CiPaw.04G128500 Carya illinoinensis HOM05D006851 ORTHO05D008844 1.3e-10 70.1 70 62.9
COL.COLO4_33621 Corchorus olitorius HOM05D006851 ORTHO05D008844 3.0e-10 68.9 85 47.1
FAN14G0067 Fragaria x ananassa HOM05D006851 ORTHO05D008844 3.9e-10 68.6 87 54.0
FvH4_6g27820 Fragaria vesca HOM05D006851 ORTHO05D008844 5.1e-10 68.2 87 54.0
Aa31LG1G24530 Aethionema arabicum HOM05D006851 ORTHO05D008844 8.6e-10 67.4 77 55.8
AL4G41380 Arabidopsis lyrata HOM05D006851 ORTHO05D008844 8.6e-10 67.4 78 48.7
Dinv00450 Davidia involucrata HOM05D006851 ORTHO05D008844 8.6e-10 67.4 71 59.2
FAN09G4077 Fragaria x ananassa HOM05D006851 ORTHO05D008844 1.5e-09 66.6 87 52.9
RcHm_v2.0_Chr2g0131101 Rosa chinensis HOM05D006851 ORTHO05D008844 1.5e-09 66.6 102 47.1
Dinv06196 Davidia involucrata HOM05D006851 ORTHO05D008844 1.9e-09 66.2 80 57.5
Atru.chr1.3299 Acer truncatum HOM05D006851 ORTHO05D008844 5.6e-09 64.7 114 45.6
Atru.chr6.2752 Acer truncatum HOM05D006851 ORTHO05D008844 9.5e-09 63.9 84 56.0
Haze_13231 Corylus avellana HOM05D006851 ORTHO05D008844 9.5e-09 63.9 84 52.4
Cpa.g.sc483.1 Carica papaya HOM05D006851 ORTHO05D008844 1.6e-08 63.2 75 53.3
Thhalv10017191m.g Eutrema salsugineum HOM05D006851 ORTHO05D008844 1.6e-08 63.2 91 47.3
Gohir.A12G091300 Gossypium hirsutum HOM05D006851 ORTHO05D008844 1.6e-08 63.2 85 44.7
Gorai.008G099400 Gossypium raimondii HOM05D006851 ORTHO05D008844 1.6e-08 63.2 85 44.7
CARHR137850 Cardamine hirsuta HOM05D006851 ORTHO05D008844 2.1e-08 62.8 78 46.2
Ciclev10016542m.g Citrus clementina HOM05D006851 ORTHO05D008844 2.1e-08 62.8 80 51.2
MELO3C014448.2 Cucumis melo HOM05D006851 ORTHO05D008844 2.1e-08 62.8 106 47.2
Prupe.3G112500 Prunus persica HOM05D006851 ORTHO05D008844 2.1e-08 62.8 71 59.2
Oeu020925.1 Olea europaea HOM05D006851 ORTHO05D008844 4.7e-08 61.6 78 51.3
Gohir.D12G091800 Gossypium hirsutum HOM05D006851 ORTHO05D008844 6.2e-08 61.2 93 43.0
Lsat_1_v5_gn_4_64780 Lactuca sativa HOM05D006851 ORTHO05D008844 8.1e-08 60.8 107 43.9
vmacro12402 Vaccinium macrocarpon HOM05D006851 ORTHO05D008844 8.1e-08 60.8 75 53.3
THA.LOC104803044 Tarenaya hassleriana HOM05D006851 ORTHO05D008844 1.1e-07 60.5 106 45.3
MD09G1234300 Malus domestica HOM05D006851 ORTHO05D008844 1.4e-07 60.1 86 54.7
Thecc.01G154800 Theobroma cacao HOM05D006851 ORTHO05D008844 1.4e-07 60.1 86 46.5
Sed0012320 Sechium edule HOM05D006851 ORTHO05D008844 1.8e-07 59.7 73 50.7
PGSC0003DMG400017313 Solanum tuberosum HOM05D006851 ORTHO05D008844 1.8e-07 59.7 101 49.5
Cfa014654 Carpinus fangiana HOM05D006851 ORTHO05D008844 3.1e-07 58.9 84 50.0
ClCG09G020830 Citrullus lanatus HOM05D006851 ORTHO05D008844 3.1e-07 58.9 103 43.7
MD17G1263400 Malus domestica HOM05D006851 ORTHO05D008844 3.1e-07 58.9 81 50.6
AT2G42770 Arabidopsis thaliana HOM05D006851 ORTHO05D008844 4.0e-07 58.5 78 44.9
Duzib187G0166 Durio zibethinus HOM05D006851 ORTHO05D008844 5.2e-07 58.2 85 45.9
ClCG09G020820 Citrullus lanatus HOM05D006851 ORTHO05D008844 6.8e-07 57.8 93 47.3
CsaV3_6G037870 Cucumis sativus L. HOM05D006851 ORTHO05D008844 8.9e-07 57.4 73 53.4
Nn3g21095 Nelumbo nucifera HOM05D006851 ORTHO05D008844 8.9e-07 57.4 66 56.1
Solyc07g055340.3 Solanum lycopersicum HOM05D006851 ORTHO05D008844 8.9e-07 57.4 102 49.0
Hma1.2p1_0178F.1_g078440 Hydrangea macrophylla HOM05D006851 ORTHO05D008844 2.6e-06 55.8 78 48.7
Sopen07g026880 Solanum pennellii HOM05D006851 ORTHO05D008844 2.6e-06 55.8 102 49.0
Hma1.2p1_0178F.1_g078450 Hydrangea macrophylla HOM05D006851 ORTHO05D008844 4.4e-06 55.1 53 58.5
Lalb_Chr03g0029611 Lupinus albus HOM05D006851 ORTHO05D008844 5.8e-06 54.7 91 42.9
TWI59G1351 Tripterygium wilfordii HOM05D006851 ORTHO05D008844 5.8e-06 54.7 98 45.9
VMungo1127G1292 Vigna mungo HOM05D006851 ORTHO05D008844 9.9e-06 53.9 82 50.0


User provided reference genes

Program Settings