Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 1.2e-208 729.6 371 100.0
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 2.9e-149 532.3 370 73.8
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 2.3e-146 522.7 372 69.4
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 3.3e-145 518.8 343 72.9
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 4.3e-145 518.5 356 71.3
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 5.7e-145 518.1 343 72.6
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 1.4e-143 513.5 348 71.6
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 4.1e-143 511.9 370 69.2
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 1.2e-142 510.4 376 68.1
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 2.2e-141 506.1 346 69.4
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 8.5e-141 504.2 371 68.5
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 8.5e-141 504.2 359 70.8
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 1.1e-140 503.8 362 69.1
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 3.2e-140 502.3 372 66.7
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 3.2e-140 502.3 360 69.2
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 5.5e-140 501.5 335 72.8
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 2.1e-139 499.6 343 69.4
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 4.6e-139 498.4 339 71.4
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 7.9e-139 497.7 322 71.4
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 7.9e-139 497.7 344 70.1
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.0e-138 497.3 351 69.8
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 1.8e-138 496.5 322 72.4
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 2.3e-138 496.1 332 71.1
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 3.0e-138 495.7 369 65.9
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 3.9e-138 495.4 332 70.5
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 6.7e-138 494.6 348 68.4
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 1.1e-137 493.8 369 65.9
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 2.0e-137 493.0 331 71.6
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 2.5e-137 492.7 369 66.7
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 3.3e-137 492.3 343 69.4
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 5.7e-137 491.5 374 65.8
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 7.4e-137 491.1 374 65.8
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 1.3e-136 490.3 374 64.7
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 1.7e-136 490.0 374 65.5
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 2.2e-136 489.6 374 65.2
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 2.8e-136 489.2 380 65.8
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 2.8e-136 489.2 323 72.4
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 3.7e-136 488.8 369 65.3
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 3.7e-136 488.8 323 71.5
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 1.1e-135 487.3 371 67.9
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 1.8e-135 486.5 344 68.6
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 2.4e-135 486.1 371 64.7
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 3.1e-135 485.7 351 67.5
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 6.9e-135 484.6 381 64.6
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 9.1e-135 484.2 349 68.8
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 7.7e-134 481.1 324 70.4
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 2.9e-133 479.2 372 63.7
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 6.5e-133 478.0 374 63.6
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 8.5e-133 477.6 368 64.7
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 4.2e-132 475.3 372 64.8
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 7.2e-132 474.6 375 62.4
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 1.6e-131 473.4 377 62.1
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 3.6e-131 472.2 368 63.3
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 9.7e-129 464.2 443 57.3
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 2.2e-128 463.0 332 66.9
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 3.1e-127 459.1 360 63.3
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 1.1e-121 440.7 455 51.6
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 1.1e-119 434.1 319 68.0
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 2.0e-118 429.9 279 72.4
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 3.8e-117 425.6 316 67.4
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 1.4e-114 417.2 319 66.8
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 4.0e-114 415.6 350 59.4
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 6.8e-114 414.8 304 66.4
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 6.3e-112 408.3 301 65.4
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 4.5e-110 402.1 330 60.3
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 6.5e-109 398.3 384 56.2
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 1.1e-108 397.5 277 68.6
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 6.1e-107 391.7 363 54.3
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 1.7e-101 373.6 292 63.7
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 6.6e-101 371.7 265 66.8
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 7.3e-100 368.2 325 55.4
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 2.6e-97 359.8 330 52.4
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 3.4e-89 332.8 337 54.6
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 6.0e-86 322.0 370 50.8
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 1.4e-82 310.8 277 57.0
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 6.0e-78 295.4 213 65.7
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 2.5e-76 290.0 205 70.2
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 9.5e-76 288.1 353 45.6
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 8.9e-74 281.6 372 40.9
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 8.9e-74 281.6 211 67.3
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.2e-73 281.2 221 66.1
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.7e-72 277.3 321 45.8
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 6.0e-70 268.9 204 60.3
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 1.1e-68 264.6 233 57.5
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 1.1e-68 264.6 225 60.0
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 2.4e-63 246.9 412 36.7
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 1.3e-61 241.1 349 39.3
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 1.8e-58 230.7 259 47.1
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 3.8e-56 223.0 257 46.7
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 4.9e-56 222.6 304 40.1
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 1.9e-55 220.7 346 37.9
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 9.3e-55 218.4 220 50.9
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 4.6e-54 216.1 328 39.0
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 6.0e-54 215.7 367 39.8
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 6.0e-54 215.7 252 46.4
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 1.1e-50 204.9 307 38.4
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.5e-49 201.1 305 38.7
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 4.8e-43 179.5 115 73.9
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 4.0e-42 176.4 117 70.9
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 2.0e-41 174.1 143 58.0
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.4e-39 167.9 323 34.1
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 1.9e-39 167.5 323 31.9
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 1.3e-35 154.8 202 43.6
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 1.8e-34 151.0 101 69.3
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 6.9e-34 149.1 123 59.3
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 3.8e-32 143.3 142 54.2
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 1.1e-31 141.7 174 43.7
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 3.0e-29 133.7 138 50.7
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 2.9e-24 117.1 121 50.4
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 4.8e-19 99.8 87 55.2
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 1.5e-17 94.7 249 28.9
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 2.2e-16 90.9 55 80.0
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 1.1e-15 88.6 55 78.2
Haze_13352 Corylus avellana HOM05D006652 ORTHO05D008645 2.1e-14 84.3 139 42.4
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 2.6e-12 77.4 235 26.4
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 3.3e-12 77.0 61 62.3
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 2.8e-11 73.9 263 24.0
Cre06.g286350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 1.1e-10 72.0 244 24.2
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 1.8e-10 71.2 79 48.1
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 3.1e-10 70.5 246 27.2
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 1.6e-09 68.2 57 63.2
Cre06.g286300 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 1.3e-08 65.1 250 23.6


User provided reference genes

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