Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 1.4e-87 326.2 165 100.0
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 1.5e-52 209.9 165 67.3
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 5.6e-44 181.4 163 60.1
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 7.3e-44 181.0 165 56.4
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 4.7e-43 178.3 164 57.3
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 3.4e-41 172.2 164 51.8
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 1.7e-40 169.9 166 54.2
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 3.8e-40 168.7 166 52.4
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 2.4e-39 166.0 169 53.3
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 2.4e-39 166.0 167 53.3
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 7.1e-39 164.5 173 54.3
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 1.2e-38 163.7 165 53.3
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 2.1e-38 162.9 167 51.5
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 2.1e-38 162.9 160 55.6
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 2.7e-38 162.5 172 54.1
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 3.5e-38 162.2 165 54.5
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 7.8e-38 161.0 165 54.5
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 1.5e-36 156.8 165 53.3
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 1.5e-36 156.8 151 57.6
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.9e-36 156.4 167 50.9
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 3.3e-36 155.6 166 53.0
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 5.6e-36 154.8 172 52.3
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 5.6e-36 154.8 166 50.6
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 5.6e-36 154.8 156 53.2
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 9.6e-36 154.1 161 51.6
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.6e-35 153.3 167 49.7
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.1e-35 152.9 167 50.3
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 2.8e-35 152.5 175 51.4
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 2.8e-35 152.5 161 55.3
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 4.7e-35 151.8 162 54.9
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 6.2e-35 151.4 158 52.5
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 8.1e-35 151.0 166 53.0
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 1.8e-34 149.8 172 50.0
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 1.8e-34 149.8 156 55.8
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.0e-34 148.7 175 50.9
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 5.2e-34 148.3 157 52.2
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 5.2e-34 148.3 157 54.1
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 1.2e-33 147.1 167 49.7
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 1.5e-33 146.7 170 49.4
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 2.0e-33 146.4 170 48.8
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 3.4e-33 145.6 164 51.8
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 4.4e-33 145.2 168 51.2
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 5.8e-33 144.8 152 48.7
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 7.6e-33 144.4 160 49.4
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 1.3e-32 143.7 166 48.8
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 1.7e-32 143.3 120 64.2
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 2.9e-32 142.5 159 49.1
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 6.4e-32 141.4 165 48.5
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 8.4e-32 141.0 165 50.9
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 8.4e-32 141.0 159 53.5
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 1.4e-31 140.2 167 49.1
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 4.2e-31 138.7 156 50.0
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 1.6e-30 136.7 167 48.5
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 4.6e-30 135.2 158 53.2
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 7.8e-30 134.4 113 61.1
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 1.0e-29 134.0 162 48.8
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 1.3e-29 133.7 157 48.4
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 6.6e-29 131.3 143 50.3
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 9.6e-28 127.5 192 43.8
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 4.8e-27 125.2 150 47.3
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.1e-26 124.0 145 49.7
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 6.9e-26 121.3 173 45.1
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 2.0e-25 119.8 137 50.4
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 7.6e-25 117.9 134 50.0
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 4.9e-24 115.2 136 49.3
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 9.3e-23 110.9 162 42.6
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 4.6e-22 108.6 131 46.6
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 1.8e-21 106.7 112 53.6
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 1.1e-20 104.0 169 42.6
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 4.3e-20 102.1 138 46.4
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 2.8e-19 99.4 170 38.8
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 6.2e-19 98.2 107 54.2
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 1.8e-18 96.7 166 40.4
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 1.2e-17 94.0 137 42.3
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 1.2e-17 94.0 137 42.3
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 2.6e-17 92.8 111 45.9
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 3.8e-16 89.0 123 43.1
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 4.9e-16 88.6 96 51.0
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 4.9e-16 88.6 80 58.8
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 2.5e-12 76.3 127 39.4
Medtr8g078730 Medicago truncatula HOM05D007898 ORTHO05D010010 4.6e-06 55.5 116 31.9


User provided reference genes

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