Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 1.2e-87 326.6 178 100.0
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 7.8e-60 234.2 178 75.8
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 3.0e-59 232.3 185 73.0
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 4.8e-57 224.9 182 71.4
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 4.8e-57 224.9 178 73.0
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 1.1e-56 223.8 178 71.9
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 1.8e-56 223.0 183 69.9
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 4.0e-56 221.9 178 72.5
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 1.5e-55 219.9 182 68.7
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 3.4e-55 218.8 178 69.7
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 3.4e-55 218.8 178 69.7
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 7.6e-55 217.6 180 69.4
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 1.3e-54 216.9 179 70.4
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.3e-54 216.9 178 70.2
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 1.3e-54 216.9 181 68.0
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.7e-54 216.5 178 70.2
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 1.7e-54 216.5 178 70.2
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 2.2e-54 216.1 179 68.7
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 2.2e-54 216.1 180 68.3
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.9e-54 215.7 181 68.5
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 2.9e-54 215.7 181 69.1
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 2.9e-54 215.7 178 68.5
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 3.8e-54 215.3 178 70.8
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 4.9e-54 214.9 178 66.9
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 6.4e-54 214.5 182 67.0
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 6.4e-54 214.5 184 69.0
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 3.2e-53 212.2 180 69.4
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 4.2e-53 211.8 179 68.7
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 9.3e-53 210.7 180 70.0
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 9.3e-53 210.7 180 70.0
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 1.2e-52 210.3 178 68.0
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 1.6e-52 209.9 178 68.5
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 1.6e-52 209.9 183 65.6
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 2.7e-52 209.1 184 67.9
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 3.5e-52 208.8 178 66.9
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 3.5e-52 208.8 180 68.9
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 4.6e-52 208.4 178 66.3
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 4.6e-52 208.4 182 68.7
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 6.0e-52 208.0 178 66.9
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 1.3e-51 206.8 183 68.3
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 2.3e-51 206.1 178 65.7
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 2.3e-51 206.1 179 67.0
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 3.9e-51 205.3 175 68.0
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 3.9e-51 205.3 179 66.5
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 6.7e-51 204.5 180 68.9
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 6.7e-51 204.5 184 64.7
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 6.7e-51 204.5 182 67.6
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 8.7e-51 204.1 183 67.8
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 8.7e-51 204.1 179 67.0
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.3e-50 202.2 181 65.7
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 9.6e-50 200.7 178 65.7
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 1.3e-49 200.3 182 65.9
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 1.3e-49 200.3 180 66.1
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 1.6e-49 199.9 180 66.7
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 2.1e-49 199.5 179 64.8
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 2.1e-49 199.5 174 66.1
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 2.8e-49 199.1 182 64.3
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 2.8e-49 199.1 179 64.2
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 3.7e-49 198.7 185 63.2
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 4.8e-49 198.4 180 66.1
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 4.8e-49 198.4 182 64.3
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 6.2e-49 198.0 181 65.7
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 6.2e-49 198.0 179 65.9
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 1.4e-48 196.8 181 63.0
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 1.4e-48 196.8 178 65.7
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 1.4e-48 196.8 178 68.5
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.4e-48 196.1 188 62.8
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.1e-48 195.7 178 64.6
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 3.1e-48 195.7 183 66.1
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 4.0e-48 195.3 168 69.6
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 4.0e-48 195.3 178 64.6
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 1.2e-47 193.7 188 62.2
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.2e-47 193.7 178 63.5
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 1.2e-47 193.7 183 62.3
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.5e-47 193.4 182 62.6
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 9.9e-47 190.7 178 65.7
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.3e-46 190.3 112 85.7
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 3.8e-46 188.7 182 62.1
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 6.4e-46 188.0 181 63.0
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 6.4e-46 188.0 183 64.5
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 6.4e-46 188.0 176 62.5
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 6.4e-46 188.0 185 63.8
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 1.1e-45 187.2 168 63.7
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 1.1e-45 187.2 176 61.9
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 1.1e-45 187.2 177 63.8
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 2.4e-45 186.0 178 60.7
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 2.4e-45 186.0 147 68.0
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 2.4e-45 186.0 134 72.4
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 4.2e-45 185.3 136 71.3
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 5.5e-45 184.9 179 62.0
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 5.5e-45 184.9 185 60.0
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 5.5e-45 184.9 185 60.0
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 5.5e-45 184.9 168 66.1
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 9.3e-45 184.1 179 61.5
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 1.2e-44 183.7 183 58.5
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 1.2e-44 183.7 176 64.2
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 2.7e-44 182.6 131 73.3
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 3.5e-44 182.2 124 77.4
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 1.3e-43 180.3 174 63.8
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 1.3e-43 180.3 155 64.5
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 2.3e-43 179.5 180 61.1
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 3.0e-43 179.1 120 77.5
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 3.0e-43 179.1 161 66.5
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 3.9e-43 178.7 178 57.9
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 3.9e-43 178.7 180 58.9
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 6.7e-43 177.9 181 59.7
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 6.7e-43 177.9 181 59.7
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 6.7e-43 177.9 179 59.2
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 8.7e-43 177.6 181 59.1
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 1.5e-42 176.8 128 75.0
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 1.9e-42 176.4 179 58.1
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 1.6e-41 173.3 103 84.5
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 1.8e-40 169.9 180 56.7
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 6.9e-40 167.9 187 55.1
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 3.9e-35 152.1 110 68.2
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 9.7e-34 147.5 143 64.3
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 1.1e-32 144.1 85 84.7
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 2.4e-32 142.9 142 53.5
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 1.0e-30 137.5 140 54.3
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 3.8e-30 135.6 149 51.0
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 5.5e-29 131.7 164 48.8
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.0e-27 127.5 146 54.8
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 1.8e-27 126.7 117 56.4
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 1.7e-25 120.2 131 58.0
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 5.5e-21 105.1 138 42.0
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 7.9e-20 101.3 167 39.5
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 3.3e-18 95.9 130 51.5
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 2.4e-16 89.7 170 44.7
Cpa.g.sc1227.1 Carica papaya HOM05D006115 ORTHO05D007528 3.1e-08 62.8 86 55.8


User provided reference genes

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