Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 1.7e-216 755.7 397 100.0
Eucgr.K00844 Eucalyptus grandis HOM05D005864 ORTHO05D006770 1.4e-189 666.4 394 90.9
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 7.1e-85 318.5 440 48.0
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 3.7e-78 296.2 429 46.2
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 3.7e-78 296.2 447 46.8
PGR142G4274 Punica granatum HOM05D005864 ORTHO05D006770 1.4e-77 294.3 421 48.0
TWI75G1887 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 1.9e-77 293.9 372 50.3
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 9.2e-77 291.6 440 46.8
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 2.1e-76 290.4 431 46.6
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 6.0e-76 288.9 437 44.9
Dinv18530 Davidia involucrata HOM05D005864 ORTHO05D006770 3.9e-75 286.2 282 59.2
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 5.1e-75 285.8 436 47.2
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 1.5e-74 284.3 439 46.0
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 1.9e-74 283.9 451 45.9
CsaV3_7G003760 Cucumis sativus L. HOM05D005864 ORTHO05D006770 2.8e-73 280.0 402 46.5
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 4.7e-73 279.3 446 44.4
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 4.7e-73 279.3 454 44.3
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 1.8e-72 277.3 443 43.8
MELO3C018803.2 Cucumis melo HOM05D005864 ORTHO05D006770 6.6e-67 258.8 436 42.7
SHI10272 Sapria himalayana HOM05D005864 ORTHO05D006770 3.6e-65 253.1 427 43.1
Manes.12G077600 Manihot esculenta HOM05D005864 ORTHO05D006770 2.4e-64 250.4 404 44.1
Haze_12896 Corylus avellana HOM05D005864 ORTHO05D006770 3.1e-64 250.0 458 41.3
FvH4_6g43530 Fragaria vesca HOM05D005864 ORTHO05D006770 1.5e-63 247.7 424 41.7
Lalb_Chr19g0135701 Lupinus albus HOM05D005864 ORTHO05D006770 2.0e-63 247.3 439 41.7
Psat7g195480 Pisum sativum HOM05D005864 ORTHO05D006770 7.6e-63 245.4 438 40.0
Phvul.011G106100 Phaseolus vulgaris HOM05D005864 ORTHO05D006770 6.4e-62 242.3 424 42.7
Cpa.g.sc8.234 Carica papaya HOM05D005864 ORTHO05D006770 2.4e-61 240.4 441 42.4
Medtr4g046697 Medicago truncatula HOM05D005864 ORTHO05D006770 2.4e-61 240.4 434 43.5
Actinidia12503 Actinidia chinensis HOM05D005864 ORTHO05D006770 2.1e-60 237.3 442 41.9
Gohir.D02G187200 Gossypium hirsutum HOM05D005864 ORTHO05D006770 2.1e-60 237.3 392 41.3
ClCG02G001780 Citrullus lanatus HOM05D005864 ORTHO05D006770 4.6e-60 236.1 499 38.5
Lj3g0027429 Lotus japonicus HOM05D005864 ORTHO05D006770 7.9e-60 235.3 443 39.7
Nitab4.5_0000631g0060 Nicotiana tabacum HOM05D005864 ORTHO05D006770 7.9e-60 235.3 284 51.8
FAN14G4164 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.0e-59 235.0 443 40.0
Glyma.06G306800 Glycine max HOM05D005864 ORTHO05D006770 1.1e-58 231.5 420 41.2
Prupe.3G220100 Prunus persica HOM05D005864 ORTHO05D006770 1.9e-58 230.7 447 43.0
VMungo1127G2082 Vigna mungo HOM05D005864 ORTHO05D006770 5.6e-58 229.2 427 40.0
Duzib052G0164 Durio zibethinus HOM05D005864 ORTHO05D006770 9.6e-58 228.4 435 39.5
Solyc12g005770.3 Solanum lycopersicum HOM05D005864 ORTHO05D006770 1.3e-57 228.0 449 41.9
Nitab4.5_0006207g0020 Nicotiana tabacum HOM05D005864 ORTHO05D006770 4.8e-57 226.1 427 41.9
CDE05G3135 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 2.4e-56 223.8 442 39.1
PSO675G8332 Papaver somniferum HOM05D005864 ORTHO05D006770 3.4e-55 219.9 411 39.9
Ciclev10015598m.g Citrus clementina HOM05D005864 ORTHO05D006770 1.3e-54 218.0 386 41.2
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 7.1e-53 212.2 443 37.5
FAN09G3055 Fragaria x ananassa HOM05D005864 ORTHO05D006770 9.3e-53 211.8 439 38.5
Gohir.A03G163800 Gossypium hirsutum HOM05D005864 ORTHO05D006770 1.6e-52 211.1 437 37.8
Lsat_1_v5_gn_3_43700 Lactuca sativa HOM05D005864 ORTHO05D006770 1.6e-52 211.1 304 48.0
FAN05G0568 Fragaria x ananassa HOM05D005864 ORTHO05D006770 2.1e-52 210.7 423 40.0
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 1.8e-51 207.6 438 38.8
Sopen12g001690 Solanum pennellii HOM05D005864 ORTHO05D006770 1.8e-51 207.6 437 41.0
CAN.G80.20 Capsicum annuum HOM05D005864 ORTHO05D006770 8.7e-51 205.3 438 39.5
RcHm_v2.0_Chr2g0160051 Rosa chinensis HOM05D005864 ORTHO05D006770 1.1e-50 204.9 215 56.3
Oeu041940.1 Olea europaea HOM05D005864 ORTHO05D006770 4.3e-50 203.0 550 33.5
Aqoxy4G02070 Aquilegia oxysepala HOM05D005864 ORTHO05D006770 5.6e-50 202.6 447 36.9
Glyma.12G101400 Glycine max HOM05D005864 ORTHO05D006770 9.6e-50 201.8 419 37.2
arahy.Tifrunner.gnm1.ann1.VAE2IM Arachis hypogaea HOM05D005864 ORTHO05D006770 1.6e-49 201.1 255 49.4
Sed0014520 Sechium edule HOM05D005864 ORTHO05D006770 1.6e-49 201.1 360 41.4
Sabra07G0098400 Salix brachista HOM05D005864 ORTHO05D006770 6.2e-49 199.1 402 39.1
Migut.M00396 Erythranthe guttata HOM05D005864 ORTHO05D006770 1.1e-48 198.4 406 38.4
arahy.Tifrunner.gnm1.ann1.UG5YAZ Arachis hypogaea HOM05D005864 ORTHO05D006770 1.4e-48 198.0 510 35.1
Os02g0161200 Oryza sativa ssp. japonica HOM05D005864 ORTHO05D006770 1.8e-48 197.6 420 36.0
ATR0794G118 Amborella trichopoda HOM05D005864 ORTHO05D006770 2.4e-48 197.2 464 35.1
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 5.3e-48 196.1 429 39.4
HPP92_002197 Vanilla planifolia HOM05D005864 ORTHO05D006770 2.0e-47 194.1 447 36.9
Cc05_g05040 Coffea canephora HOM05D005864 ORTHO05D006770 3.4e-47 193.4 455 37.6
PSO541G3214 Papaver somniferum HOM05D005864 ORTHO05D006770 4.5e-47 193.0 463 33.5
HanXRQChr07g0191611 Helianthus annuus HOM05D005864 ORTHO05D006770 1.7e-46 191.0 329 42.6
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 2.9e-46 190.3 395 35.4
Zm00001eb207650 Zea mays HOM05D005864 ORTHO05D006770 6.5e-46 189.1 431 35.7
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-45 186.8 269 47.2
COL.COLO4_12982 Corchorus olitorius HOM05D005864 ORTHO05D006770 3.0e-43 180.3 394 35.0
unitig_699.g19613 Utricularia gibba HOM05D005864 ORTHO05D006770 8.7e-43 178.7 434 36.2
Sed0020795 Sechium edule HOM05D005864 ORTHO05D006770 3.3e-42 176.8 437 35.0
Peaxi162Scf00012g03212 Petunia axillaris HOM05D005864 ORTHO05D006770 9.0e-40 168.7 430 36.3
TAR624G1226 Trochodendron aralioides HOM05D005864 ORTHO05D006770 4.5e-39 166.4 308 42.5
AL3G35960 Arabidopsis lyrata HOM05D005864 ORTHO05D006770 1.7e-38 164.5 254 42.5
Sp3g19810 Schrenkiella parvula HOM05D005864 ORTHO05D006770 2.2e-38 164.1 389 35.0
FAN02G2067 Fragaria x ananassa HOM05D005864 ORTHO05D006770 3.8e-38 163.3 383 36.6
CDE05G1184 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 3.2e-37 160.2 408 36.3
BcaC09g49121 Brassica carinata HOM05D005864 ORTHO05D006770 2.1e-36 157.5 257 42.4
Thhalv10020800m.g Eutrema salsugineum HOM05D005864 ORTHO05D006770 7.9e-36 155.6 432 33.1
A01p33130 Brassica napus HOM05D005864 ORTHO05D006770 1.3e-35 154.8 259 41.3
TAR626G1271 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.3e-35 154.8 140 62.1
BcaB04g20556 Brassica carinata HOM05D005864 ORTHO05D006770 3.0e-35 153.7 378 35.4
Aa31LG8G8400 Aethionema arabicum HOM05D005864 ORTHO05D006770 1.1e-34 151.8 435 34.0
unitig_85.g27303 Utricularia gibba HOM05D005864 ORTHO05D006770 1.5e-34 151.4 421 32.8
AT3G21810 Arabidopsis thaliana HOM05D005864 ORTHO05D006770 1.9e-34 151.0 265 40.4
CARHR097800 Cardamine hirsuta HOM05D005864 ORTHO05D006770 4.3e-34 149.8 383 34.2
BolC1t04192H Brassica oleracea HOM05D005864 ORTHO05D006770 7.4e-34 149.1 257 40.9
Ca_19101_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 1.8e-32 144.4 396 34.3
AUR62025062 Chenopodium quinoa HOM05D005864 ORTHO05D006770 1.2e-31 141.7 527 28.1
PGSC0003DMG401024331 Solanum tuberosum HOM05D005864 ORTHO05D006770 7.7e-31 139.0 430 34.0
SEGI_09449 Sequoiadendron giganteum HOM05D005864 ORTHO05D006770 1.0e-30 138.7 267 37.5
AUR62037142 Chenopodium quinoa HOM05D005864 ORTHO05D006770 8.5e-30 135.6 368 31.5
Rhsim06G0158200 Rhododendron simsii HOM05D005864 ORTHO05D006770 8.5e-30 135.6 479 31.7
Eucgr.K00850 Eucalyptus grandis HOM05D005864 ORTHO05D006770 1.1e-29 135.2 103 71.8
TPR.G19040 Trifolium pratense HOM05D005864 ORTHO05D006770 1.1e-29 135.2 400 33.0
Gorai.005G209600 Gossypium raimondii HOM05D005864 ORTHO05D006770 6.7e-27 125.9 337 34.1
MD09G1105200 Malus domestica HOM05D005864 ORTHO05D006770 2.0e-26 124.4 391 33.5
Actinidia32077 Actinidia chinensis HOM05D005864 ORTHO05D006770 1.7e-25 121.3 314 35.4
Mapoly0099s0053 Marchantia polymorpha HOM05D005864 ORTHO05D006770 2.2e-25 120.9 286 35.0
BraA01t03436Z Brassica rapa HOM05D005864 ORTHO05D006770 6.9e-24 115.9 388 30.9
EL10Ac9g20653 Beta vulgaris HOM05D005864 ORTHO05D006770 3.4e-23 113.6 423 28.4
FAN09G4739 Fragaria x ananassa HOM05D005864 ORTHO05D006770 2.2e-22 110.9 87 66.7
C01p42370 Brassica napus HOM05D005864 ORTHO05D006770 1.9e-21 107.8 398 29.1
Ah.01g003700 Amaranthus hybridus HOM05D005864 ORTHO05D006770 1.2e-20 105.1 368 30.4
vmacro12226 Vaccinium macrocarpon HOM05D005864 ORTHO05D006770 7.9e-20 102.4 510 30.4
Zm00001eb273610 Zea mays HOM05D005864 ORTHO05D006770 7.9e-20 102.4 265 33.6
DCAR_021187 Daucus carota HOM05D005864 ORTHO05D006770 3.3e-18 97.1 344 30.5
CSS0029042 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 1.3e-17 95.1 176 42.0
Pp3c11_20880 Physcomitrium patens HOM05D005864 ORTHO05D006770 5.9e-15 86.3 251 33.5
TAR626G0331 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.0e-14 85.5 72 63.9
Carub.0003s2189 Capsella rubella HOM05D005864 ORTHO05D006770 1.3e-14 85.1 277 31.0
Pp3c7_5470 Physcomitrium patens HOM05D005864 ORTHO05D006770 6.5e-14 82.8 265 34.0
Zm00001eb225260 Zea mays HOM05D005864 ORTHO05D006770 1.6e-12 78.2 128 35.9
AagrBONN_evm.TU.Sc2ySwM_369.130 Anthoceros agrestis HOM05D005864 ORTHO05D006770 1.4e-11 75.1 221 31.2
CDE05G1677 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 6.7e-11 72.8 53 62.3
TAR375G0046 Trochodendron aralioides HOM05D005864 ORTHO05D006770 9.1e-08 62.4 39 69.2
TAR372G0002 Trochodendron aralioides HOM05D005864 ORTHO05D006770 2.0e-07 61.2 39 69.2
Hund01249 Selenicereus undatus HOM05D005864 ORTHO05D006770 4.5e-07 60.1 119 40.3
TAR353G0003 Trochodendron aralioides HOM05D005864 ORTHO05D006770 2.2e-06 57.8 36 72.2
CSS0011199 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 3.8e-06 57.0 93 43.0
CSS0018090 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 5.0e-06 56.6 69 53.6
TPR.G1791 Trifolium pratense HOM05D005864 ORTHO05D006770 6.5e-06 56.2 70 52.9


User provided reference genes

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