Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K00797 Eucalyptus grandis HOM05D007398 ORTHO05D004912 3.8e-56 221.5 127 100.0
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 2.1e-22 109.4 132 52.3
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 2.1e-22 109.4 132 52.3
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 4.6e-22 108.2 131 54.2
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 5.1e-21 104.8 129 52.7
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 8.7e-21 104.0 132 50.0
Prupe.3G217200 Prunus persica HOM05D007398 ORTHO05D004912 1.9e-20 102.8 133 51.1
CANSAT64G0797 Cannabis sativa HOM05D007398 ORTHO05D004912 2.5e-20 102.4 130 50.0
FvH4_6g43180 Fragaria vesca HOM05D007398 ORTHO05D004912 9.7e-20 100.5 132 49.2
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 1.3e-19 100.1 120 52.5
MD17G1096900 Malus domestica HOM05D007398 ORTHO05D004912 2.8e-19 99.0 133 48.1
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 3.7e-19 98.6 132 48.5
FAN10G4171 Fragaria x ananassa HOM05D007398 ORTHO05D004912 6.3e-19 97.8 132 48.5
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 8.2e-19 97.4 109 54.1
FAN05G1963 Fragaria x ananassa HOM05D007398 ORTHO05D004912 8.2e-19 97.4 132 47.7
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.1e-18 97.1 132 48.5
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 1.8e-18 96.3 133 48.1
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 2.4e-18 95.9 127 49.6
Cc05_g04620 Coffea canephora HOM05D007398 ORTHO05D004912 6.9e-18 94.4 119 52.9
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 2.0e-17 92.8 133 46.6
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 1.0e-16 90.5 126 46.8
arahy.Tifrunner.gnm1.ann1.TIC55L Arachis hypogaea HOM05D007398 ORTHO05D004912 2.9e-16 89.0 128 43.8
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 2.9e-16 89.0 127 45.7
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 5.0e-16 88.2 121 48.8
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 5.0e-16 88.2 144 44.4
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 1.4e-15 86.7 145 44.1
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 1.9e-15 86.3 127 48.0
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 1.9e-15 86.3 99 55.6
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 2.5e-15 85.9 130 45.4
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 2.5e-15 85.9 130 45.4
MELO3C018817.2 Cucumis melo HOM05D007398 ORTHO05D004912 2.5e-15 85.9 120 44.2
Duzib248G0799 Durio zibethinus HOM05D007398 ORTHO05D004912 4.2e-15 85.1 120 50.8
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 4.2e-15 85.1 126 44.4
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 4.2e-15 85.1 124 43.5
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 1.2e-14 83.6 120 50.0
TWI18G0787 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 1.6e-14 83.2 133 44.4
ClCG00G003290 Citrullus lanatus HOM05D007398 ORTHO05D004912 2.7e-14 82.4 125 43.2
ClCG02G001930 Citrullus lanatus HOM05D007398 ORTHO05D004912 2.7e-14 82.4 125 43.2
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 3.6e-14 82.0 128 43.8
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 4.6e-14 81.6 126 46.0
CsaV3_7G003580 Cucumis sativus L. HOM05D007398 ORTHO05D004912 6.1e-14 81.3 120 43.3
arahy.Tifrunner.gnm1.ann1.X0QM4L Arachis hypogaea HOM05D007398 ORTHO05D004912 7.9e-14 80.9 128 40.6
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 7.9e-14 80.9 121 45.5
Lsat_1_v5_gn_7_92201 Lactuca sativa HOM05D007398 ORTHO05D004912 7.9e-14 80.9 144 40.3
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 1.0e-13 80.5 116 50.0
Gohir.A12G157600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.8e-13 79.7 121 48.8
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 3.0e-13 79.0 128 43.0
Oeu041920.1 Olea europaea HOM05D007398 ORTHO05D004912 3.9e-13 78.6 127 41.7
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 3.9e-13 78.6 126 43.7
Gorai.008G173500 Gossypium raimondii HOM05D007398 ORTHO05D004912 5.1e-13 78.2 121 49.6
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.1e-12 77.0 117 43.6
Glyma.12G193700 Glycine max HOM05D007398 ORTHO05D004912 1.5e-12 76.6 123 55.3
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 3.3e-12 75.5 97 44.3
Gohir.A04G144600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 4.3e-12 75.1 115 46.1
Gohir.D12G159800 Gossypium hirsutum HOM05D007398 ORTHO05D004912 5.7e-12 74.7 121 48.8
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 5.7e-12 74.7 121 43.0
Rhsim06G0162600 Rhododendron simsii HOM05D007398 ORTHO05D004912 1.7e-11 73.2 133 47.4
Sed0017095 Sechium edule HOM05D007398 ORTHO05D004912 1.7e-11 73.2 127 39.4
MBI02_g21879_MAGBIO Magnolia biondii HOM05D007398 ORTHO05D004912 2.2e-11 72.8 119 43.7
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 2.8e-11 72.4 125 42.4
Medtr2g088320 Medicago truncatula HOM05D007398 ORTHO05D004912 1.1e-10 70.5 128 45.3
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 1.8e-10 69.7 128 39.8
VMungo1080G0246 Vigna mungo HOM05D007398 ORTHO05D004912 1.8e-10 69.7 115 42.6
Gohir.D04G189100 Gossypium hirsutum HOM05D007398 ORTHO05D004912 3.1e-10 68.9 115 44.3
PSO541G0095 Papaver somniferum HOM05D007398 ORTHO05D004912 4.1e-10 68.6 118 42.4
Sed0010410 Sechium edule HOM05D007398 ORTHO05D004912 4.1e-10 68.6 130 42.3
Gorai.012G184400 Gossypium raimondii HOM05D007398 ORTHO05D004912 6.9e-10 67.8 115 46.1
ClCG02G008700 Citrullus lanatus HOM05D007398 ORTHO05D004912 2.0e-09 66.2 140 37.9
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 2.0e-09 66.2 94 41.5
PGR083G1220 Punica granatum HOM05D007398 ORTHO05D004912 4.5e-09 65.1 120 43.3
QL05p073115 Quercus lobata HOM05D007398 ORTHO05D004912 5.9e-09 64.7 96 40.6
Sed0017131 Sechium edule HOM05D007398 ORTHO05D004912 5.9e-09 64.7 136 41.2
ECA236G3422 Erigeron canadensis HOM05D007398 ORTHO05D004912 7.7e-09 64.3 141 39.7
Sed0025347 Sechium edule HOM05D007398 ORTHO05D004912 1.3e-08 63.5 133 36.1
HanXRQChr16g0504931 Helianthus annuus HOM05D007398 ORTHO05D004912 5.0e-08 61.6 143 40.6
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 6.5e-08 61.2 136 45.6
Lalb_Chr24g0393181 Lupinus albus HOM05D007398 ORTHO05D004912 1.9e-07 59.7 102 40.2
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 1.9e-07 59.7 96 39.6
Thecc.07G035100 Theobroma cacao HOM05D007398 ORTHO05D004912 1.9e-07 59.7 87 43.7
HanXRQChr03g0069481 Helianthus annuus HOM05D007398 ORTHO05D004912 3.2e-07 58.9 113 38.1
Duzib213G1052 Durio zibethinus HOM05D007398 ORTHO05D004912 7.2e-07 57.8 96 40.6
CDE01G0169 Ceratophyllum demersum HOM05D001264 ORTHO05D001167 1.2e-06 57.0 103 40.8
Lsat_1_v5_gn_9_106500 Lactuca sativa HOM05D007398 ORTHO05D004912 1.6e-06 56.6 142 35.2


User provided reference genes

Program Settings