Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 3.8e-108 394.8 197 100.0
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 5.8e-80 301.2 188 78.2
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 1.7e-79 299.7 188 77.7
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 1.9e-78 296.2 189 76.2
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 4.1e-78 295.0 186 78.0
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 7.1e-78 294.3 186 78.5
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 7.1e-78 294.3 202 73.8
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 9.2e-78 293.9 190 75.3
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 9.2e-78 293.9 191 75.9
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 1.6e-77 293.1 188 77.1
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 2.7e-77 292.4 188 76.6
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 1.0e-76 290.4 188 77.1
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 1.3e-76 290.0 188 77.1
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 2.3e-76 289.3 190 74.2
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 3.0e-76 288.9 190 73.7
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 3.0e-76 288.9 188 76.6
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 3.9e-76 288.5 188 75.5
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 5.1e-76 288.1 190 75.8
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 1.1e-75 287.0 191 74.3
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 1.5e-75 286.6 191 73.8
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 2.5e-75 285.8 190 73.7
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 3.3e-75 285.4 190 72.1
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 2.1e-74 282.7 188 73.9
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 2.1e-74 282.7 190 72.6
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 2.8e-74 282.3 191 72.3
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 3.6e-74 282.0 191 72.3
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 4.7e-74 281.6 190 71.1
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 6.2e-74 281.2 187 73.8
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 1.1e-73 280.4 190 71.6
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 1.4e-73 280.0 188 72.9
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 1.8e-73 279.6 177 75.7
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 2.4e-73 279.3 188 73.9
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 5.2e-73 278.1 193 71.5
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 5.2e-73 278.1 190 70.5
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 8.9e-73 277.3 187 71.7
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 1.2e-72 276.9 193 70.5
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 1.5e-72 276.6 190 70.5
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 1.5e-72 276.6 186 71.5
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 2.6e-72 275.8 193 71.5
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 3.4e-72 275.4 193 70.5
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 4.4e-72 275.0 193 69.4
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 1.3e-71 273.5 193 69.4
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 1.7e-71 273.1 187 73.3
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 4.9e-71 271.6 193 69.4
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 6.4e-71 271.2 168 78.6
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 1.9e-70 269.6 190 68.4
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 2.4e-70 269.2 188 69.7
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 3.2e-70 268.9 187 70.1
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 4.2e-70 268.5 186 71.5
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 1.2e-69 266.9 170 74.7
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 1.6e-69 266.5 190 68.9
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 2.1e-69 266.2 188 69.7
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 2.7e-69 265.8 193 67.4
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 6.0e-69 264.6 189 70.4
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 1.0e-68 263.8 191 70.7
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 2.3e-68 262.7 188 67.0
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 3.0e-68 262.3 190 66.8
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 5.1e-68 261.5 188 70.2
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 1.1e-67 260.4 185 66.5
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 1.5e-67 260.0 181 68.5
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 1.5e-67 260.0 188 67.0
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 1.9e-67 259.6 192 65.1
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 1.9e-67 259.6 188 64.9
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 9.6e-67 257.3 165 78.2
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 9.6e-67 257.3 177 71.8
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 1.3e-66 256.9 184 70.7
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 2.1e-66 256.1 190 65.8
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 3.1e-65 252.3 174 69.0
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 5.3e-65 251.5 173 71.1
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 6.9e-65 251.1 147 82.3
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 9.0e-65 250.8 177 68.9
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 1.2e-64 250.4 176 69.3
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 4.9e-63 245.0 249 53.0
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 4.9e-63 245.0 204 63.2
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 1.6e-61 240.0 153 73.2
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 8.7e-60 234.2 150 71.3
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.1e-59 233.8 197 64.0
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 9.6e-59 230.7 166 71.1
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 1.3e-58 230.3 140 77.9
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 1.8e-57 226.5 182 64.8
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 1.3e-55 220.3 339 41.3
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 2.7e-53 212.6 167 64.7
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 6.0e-53 211.5 307 40.7
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 6.0e-53 211.5 307 40.7
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 3.1e-49 199.1 131 73.3
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 4.0e-49 198.7 133 73.7
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 9.0e-49 197.6 172 56.4
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 1.4e-46 190.3 132 69.7
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 7.1e-46 188.0 169 54.4
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.3e-42 177.2 191 50.3
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 8.2e-42 174.5 109 71.6
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 1.1e-41 174.1 135 64.4
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 1.1e-41 174.1 191 51.3
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 1.3e-39 167.2 121 67.8
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 4.6e-37 158.7 171 50.3
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 2.3e-36 156.4 248 44.4
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 2.6e-32 142.9 87 82.8
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 2.7e-29 132.9 277 31.4
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 1.7e-26 123.6 111 57.7
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 9.1e-25 117.9 84 58.3
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.9e-22 110.2 80 72.5
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 5.7e-19 98.6 129 43.4
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 2.8e-18 96.3 110 52.7
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 8.2e-18 94.7 170 36.5
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 7.7e-16 88.2 70 64.3
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 2.1e-13 80.1 55 69.1
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 2.0e-11 73.6 100 44.0
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 5.7e-11 72.0 49 71.4
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 5.5e-06 55.5 41 56.1


User provided reference genes

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