Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K00650 Eucalyptus grandis HOM05D004793 ORTHO05D004423 3.6e-70 268.1 131 100.0
Sabra14G0125700 Salix brachista HOM05D004793 ORTHO05D004423 1.2e-17 93.6 139 44.6
Potri.014G165000 Populus trichocarpa HOM05D004793 ORTHO05D004423 1.6e-17 93.2 141 44.0
Ciclev10017917m.g Citrus clementina HOM05D004793 ORTHO05D004423 3.5e-17 92.0 132 44.7
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 3.0e-16 89.0 133 48.1
Duzib138G1142 Durio zibethinus HOM05D004793 ORTHO05D004423 2.5e-15 85.9 132 43.2
Atru.chr6.3360 Acer truncatum HOM05D004793 ORTHO05D004423 3.7e-14 82.0 137 43.1
QL08p028591 Quercus lobata HOM05D004793 ORTHO05D004423 1.1e-13 80.5 133 43.6
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 3.1e-13 79.0 131 38.9
Gohir.D07G197000 Gossypium hirsutum HOM05D004793 ORTHO05D004423 6.9e-13 77.8 133 42.9
Gorai.001G220800 Gossypium raimondii HOM05D004793 ORTHO05D004423 6.9e-13 77.8 133 42.9
Gohir.A07G190700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 1.5e-12 76.6 133 42.1
Hma1.2p1_1825F.1_g304390 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 2.0e-12 76.3 132 40.9
Manes.12G061300 Manihot esculenta HOM05D004793 ORTHO05D004423 2.6e-12 75.9 132 41.7
Hma1.2p1_0133F.1_g061430 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 4.5e-12 75.1 132 40.2
Manes.13G062900 Manihot esculenta HOM05D004793 ORTHO05D004423 2.2e-11 72.8 133 40.6
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 8.4e-11 70.9 131 38.2
COL.COLO4_08493 Corchorus olitorius HOM05D004793 ORTHO05D004423 1.4e-10 70.1 141 40.4
Nn1g07451 Nelumbo nucifera HOM05D004793 ORTHO05D004423 2.5e-10 69.3 135 43.0
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 2.5e-10 69.3 131 42.0
TWI36G0659 Tripterygium wilfordii HOM05D004793 ORTHO05D004423 4.2e-10 68.6 133 40.6
FvH4_6g41090 Fragaria vesca HOM05D004793 ORTHO05D004423 5.5e-10 68.2 134 41.8
FAN14G5076 Fragaria x ananassa HOM05D004793 ORTHO05D004423 1.2e-09 67.0 133 42.1
LjContig00081g0018270 Lotus japonicus HOM05D004793 ORTHO05D004423 1.6e-09 66.6 132 40.2
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 2.7e-09 65.9 131 38.2
Cpa.g.sc211.5 Carica papaya HOM05D004793 ORTHO05D004423 3.5e-09 65.5 149 36.9
Medtr5g097300 Medicago truncatula HOM05D004793 ORTHO05D004423 4.6e-09 65.1 131 41.2
DCAR_019706 Daucus carota HOM05D004793 ORTHO05D004423 1.8e-08 63.2 145 38.6
CSS0020838 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 2.3e-08 62.8 134 41.0
CSS0047668 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 2.3e-08 62.8 134 41.0
Eucgr.A01045 Eucalyptus grandis HOM05D004793 ORTHO05D004423 2.3e-08 62.8 142 41.5
Prupe.3G201300 Prunus persica HOM05D004793 ORTHO05D004423 3.0e-08 62.4 138 40.6
CiPaw.03G278900 Carya illinoinensis HOM05D004793 ORTHO05D004423 3.9e-08 62.0 133 37.6
PGR142G2586 Punica granatum HOM05D004793 ORTHO05D004423 5.1e-08 61.6 139 38.1
Rhsim04G0014600 Rhododendron simsii HOM05D004793 ORTHO05D004423 6.7e-08 61.2 146 37.7
Ca_06456_v3 Cicer arietinum L. HOM05D004793 ORTHO05D004423 8.7e-08 60.8 131 36.6
Manes.15G062700 Manihot esculenta HOM05D004793 ORTHO05D004423 1.9e-07 59.7 134 35.1
Psat2g004520 Pisum sativum HOM05D004793 ORTHO05D004423 3.3e-07 58.9 127 37.0
RcHm_v2.0_Chr2g0156651 Rosa chinensis HOM05D004793 ORTHO05D004423 3.3e-07 58.9 134 37.3
TPR.G1320 Trifolium pratense HOM05D004793 ORTHO05D004423 3.3e-07 58.9 131 38.9
Glyma.14G007800 Glycine max HOM05D004793 ORTHO05D004423 7.4e-07 57.8 134 38.1
Lalb_Chr15g0088081 Lupinus albus HOM05D004793 ORTHO05D004423 7.4e-07 57.8 149 38.3
GSVIVG01002881001 Vitis vinifera HOM05D000222 ORTHO05D003997 9.7e-07 57.4 139 35.3
Glyma.09G012000 Glycine max HOM05D004793 ORTHO05D004423 1.3e-06 57.0 140 36.4
CiPaw.10G079700 Carya illinoinensis HOM05D004793 ORTHO05D004423 1.6e-06 56.6 140 38.6
Glyma.15G116700 Glycine max HOM05D004793 ORTHO05D004423 1.6e-06 56.6 142 37.3
Glyma.02G305500 Glycine max HOM05D004793 ORTHO05D004423 2.2e-06 56.2 137 37.2
Aqoxy1G04226 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 2.8e-06 55.8 140 35.7
ClCG09G021090 Citrullus lanatus HOM05D004793 ORTHO05D004423 3.7e-06 55.5 131 33.6
Psat1g178240 Pisum sativum HOM05D004793 ORTHO05D004423 3.7e-06 55.5 143 35.0
Aqoxy4G02224 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 4.8e-06 55.1 136 33.1
CsaV3_7G018540 Cucumis sativus L. HOM05D004793 ORTHO05D004423 4.8e-06 55.1 131 32.1
Potri.001G362000 Populus trichocarpa HOM05D004793 ORTHO05D004423 4.8e-06 55.1 141 35.5
Medtr2g026510 Medicago truncatula HOM05D004793 ORTHO05D004423 6.3e-06 54.7 142 34.5
CSS0019001 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 8.2e-06 54.3 134 35.8
Eucgr.D01438 Eucalyptus grandis HOM05D004793 ORTHO05D004423 8.2e-06 54.3 144 31.2
Eucgr.E03889 Eucalyptus grandis HOM05D004793 ORTHO05D004423 8.2e-06 54.3 145 36.6


User provided reference genes

Program Settings