Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K00529 Eucalyptus grandis HOM05D003381 ORTHO05D003880 3.0e-39 164.9 92 100.0
Eucgr.K00481 Eucalyptus grandis HOM05D003381 ORTHO05D003880 1.7e-21 105.9 95 73.7
Eucgr.K00482 Eucalyptus grandis HOM05D003381 ORTHO05D003880 4.0e-15 84.7 97 62.9
Eucgr.K00530 Eucalyptus grandis HOM05D003381 ORTHO05D003880 4.0e-15 84.7 97 62.9
RcHm_v2.0_Chr1g0383321 Rosa chinensis HOM05D003381 ORTHO05D003880 1.5e-09 66.2 85 52.9
MD01G1231600 Malus domestica HOM05D003381 ORTHO05D003880 1.9e-09 65.9 85 51.8
FAN10G2693 Fragaria x ananassa HOM05D003381 ORTHO05D003880 2.5e-09 65.5 85 50.6
FAN10G4285 Fragaria x ananassa HOM05D003381 ORTHO05D003880 2.5e-09 65.5 85 50.6
Prupe.2G322300 Prunus persica HOM05D003381 ORTHO05D003880 4.3e-09 64.7 85 52.9
AUR62005946 Chenopodium quinoa HOM05D003381 ORTHO05D003880 1.6e-08 62.8 87 50.6
Glyma.14G188300 Glycine max HOM05D003381 ORTHO05D003880 2.1e-08 62.4 84 52.4
AUR62028119 Chenopodium quinoa HOM05D003381 ORTHO05D003880 2.8e-08 62.0 87 54.0
FAN03G2343 Fragaria x ananassa HOM05D003381 ORTHO05D003880 2.8e-08 62.0 85 48.2
Lsat_1_v5_gn_8_4301 Lactuca sativa HOM05D003381 ORTHO05D003880 3.6e-08 61.6 53 58.5
Oeu063749.1 Olea europaea HOM05D003381 ORTHO05D003880 3.6e-08 61.6 54 63.0
Phvul.009G040500 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 3.6e-08 61.6 90 52.2
FvH4_7g33340 Fragaria vesca HOM05D003381 ORTHO05D003880 4.7e-08 61.2 85 48.2
Glyma.06G139300 Glycine max HOM05D003381 ORTHO05D003880 4.7e-08 61.2 90 51.1
DCAR_010556 Daucus carota HOM05D003381 ORTHO05D003880 6.1e-08 60.8 86 51.2
MD07G1303600 Malus domestica HOM05D003381 ORTHO05D003880 8.0e-08 60.5 87 48.3
Peaxi162Scf00685g10014 Petunia axillaris HOM05D003381 ORTHO05D003880 8.0e-08 60.5 51 64.7
Sopen03g027520 Solanum pennellii HOM05D003381 ORTHO05D003880 8.0e-08 60.5 83 54.2
ClCG01G000030 Citrullus lanatus HOM05D003381 ORTHO05D003880 1.0e-07 60.1 84 57.1
Migut.F00121 Erythranthe guttata HOM05D003381 ORTHO05D003880 1.0e-07 60.1 90 50.0
Nitab4.5_0000115g0190 Nicotiana tabacum HOM05D003381 ORTHO05D003880 1.4e-07 59.7 85 51.8
Nitab4.5_0002691g0080 Nicotiana tabacum HOM05D003381 ORTHO05D003880 1.4e-07 59.7 86 51.2
Nitab4.5_0002867g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 1.4e-07 59.7 86 50.0
Solyc03g096780.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 1.4e-07 59.7 83 54.2
CAN.G303.62 Capsicum annuum HOM05D003381 ORTHO05D003880 1.8e-07 59.3 85 50.6
CANSAT21G1431 Cannabis sativa HOM05D003381 ORTHO05D003880 2.3e-07 58.9 84 51.2
Dinv17275 Davidia involucrata HOM05D003381 ORTHO05D003880 2.3e-07 58.9 87 50.6
Nitab4.5_0002691g0070 Nicotiana tabacum HOM05D003381 ORTHO05D003880 2.3e-07 58.9 88 47.7
Oeu055427.1 Olea europaea HOM05D003381 ORTHO05D003880 2.3e-07 58.9 54 63.0
Phvul.008G187900 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 2.3e-07 58.9 77 54.5
Cc02_g00580 Coffea canephora HOM05D003381 ORTHO05D003880 3.0e-07 58.5 85 49.4
Lalb_Chr08g0239391 Lupinus albus HOM05D003381 ORTHO05D003880 3.0e-07 58.5 89 49.4
PGSC0003DMG400000545 Solanum tuberosum HOM05D003381 ORTHO05D003880 3.0e-07 58.5 85 51.8
LjContig00155g0019595 Lotus japonicus HOM05D003381 ORTHO05D003880 4.0e-07 58.2 85 50.6
CANSAT21G0934 Cannabis sativa HOM05D003381 ORTHO05D003880 5.2e-07 57.8 85 49.4
Nitab4.5_0007121g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 5.2e-07 57.8 89 51.7
Peaxi162Scf00007g00254 Petunia axillaris HOM05D003381 ORTHO05D003880 5.2e-07 57.8 85 48.2
Migut.F00966 Erythranthe guttata HOM05D003381 ORTHO05D003880 6.8e-07 57.4 92 48.9
HanXRQChr08g0225861 Helianthus annuus HOM05D003381 ORTHO05D003880 6.8e-07 57.4 82 50.0
HanXRQChr08g0225881 Helianthus annuus HOM05D003381 ORTHO05D003880 6.8e-07 57.4 90 51.1
Solyc03g096770.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 6.8e-07 57.4 85 47.1
AUR62005945 Chenopodium quinoa HOM05D003381 ORTHO05D003880 8.9e-07 57.0 86 50.0
ECA232G1694 Erigeron canadensis HOM05D003381 ORTHO05D003880 8.9e-07 57.0 48 64.6
Lalb_Chr04g0252571 Lupinus albus HOM05D003381 ORTHO05D003880 8.9e-07 57.0 90 48.9
Lj1g0021256 Lotus japonicus HOM05D003381 ORTHO05D003880 1.2e-06 56.6 83 50.6
Potri.012G004500 Populus trichocarpa HOM05D003381 ORTHO05D003880 1.2e-06 56.6 77 51.9
Medtr3g093400 Medicago truncatula HOM05D003381 ORTHO05D003880 1.5e-06 56.2 81 50.6
PGSC0003DMG400000546 Solanum tuberosum HOM05D003381 ORTHO05D003880 1.5e-06 56.2 88 47.7
VMungo1309G1451 Vigna mungo HOM05D003381 ORTHO05D003880 1.5e-06 56.2 90 50.0
HanXRQChr08g0225771 Helianthus annuus HOM05D003381 ORTHO05D003880 2.0e-06 55.8 90 50.0
HanXRQChr08g0225851 Helianthus annuus HOM05D003381 ORTHO05D003880 2.0e-06 55.8 90 50.0
Lsat_1_v5_gn_8_4241 Lactuca sativa HOM05D003381 ORTHO05D003880 2.0e-06 55.8 52 59.6
Oeu017357.1 Olea europaea HOM05D003381 ORTHO05D003880 2.0e-06 55.8 85 49.4
Psat5g070520 Pisum sativum HOM05D003381 ORTHO05D003880 2.0e-06 55.8 81 50.6
Ciclev10022951m.g Citrus clementina HOM05D003381 ORTHO05D003880 2.6e-06 55.5 78 52.6
Lsat_1_v5_gn_2_3421 Lactuca sativa HOM05D003381 ORTHO05D003880 2.6e-06 55.5 52 57.7
Manes.01G002300 Manihot esculenta HOM05D003381 ORTHO05D003880 2.6e-06 55.5 78 51.3
SalBow4G2332 Salvia bowleyana HOM05D003381 ORTHO05D003880 2.6e-06 55.5 82 54.9
Sopen03g027500 Solanum pennellii HOM05D003381 ORTHO05D003880 3.4e-06 55.1 88 46.6
PGSC0003DMG400000547 Solanum tuberosum HOM05D003381 ORTHO05D003880 3.4e-06 55.1 85 47.1
TPR.G35911 Trifolium pratense HOM05D003381 ORTHO05D003880 3.4e-06 55.1 83 49.4
CAN.G303.61 Capsicum annuum HOM05D003381 ORTHO05D003880 5.7e-06 54.3 86 48.8
CAN.G65.142 Capsicum annuum HOM05D003381 ORTHO05D003880 5.7e-06 54.3 45 68.9
Ca_16840_v3 Cicer arietinum L. HOM05D003381 ORTHO05D003880 5.7e-06 54.3 80 51.2
Glyma.04G225500 Glycine max HOM05D003381 ORTHO05D003880 5.7e-06 54.3 90 48.9
Hma1.2p1_0115F.1_g055840 Hydrangea macrophylla HOM05D003381 ORTHO05D003880 5.7e-06 54.3 78 50.0
QL09p005975 Quercus lobata HOM05D003381 ORTHO05D003880 5.7e-06 54.3 52 61.5
Atru.chr12.2499 Acer truncatum HOM05D003381 ORTHO05D003880 7.5e-06 53.9 77 51.9
Atru.chr12.2523 Acer truncatum HOM05D003381 ORTHO05D003880 7.5e-06 53.9 77 51.9
Solyc06g072990.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 7.5e-06 53.9 47 70.2


User provided reference genes

Program Settings