Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K00452 Eucalyptus grandis HOM05D006657 ORTHO05D005964 0.0e+00 2077.4 1009 100.0
Eucgr.K00044 Eucalyptus grandis HOM05D006657 ORTHO05D005964 0.0e+00 2029.2 1005 98.3
TAR374G0213 Trochodendron aralioides HOM05D006657 ORTHO05D005964 1.2e-24 119.8 519 28.5
Duzib205G0597 Durio zibethinus HOM05D006657 ORTHO05D005964 3.6e-24 118.2 422 29.1
Prupe.2G320100 Prunus persica HOM05D006657 ORTHO05D005964 1.4e-23 116.3 362 29.0
Thecc.03G210000 Theobroma cacao HOM05D006657 ORTHO05D005964 2.5e-22 112.1 389 30.3
RcHm_v2.0_Chr1g0383041 Rosa chinensis HOM05D006657 ORTHO05D005964 2.2e-21 109.0 479 26.5
TAR375G0071 Trochodendron aralioides HOM05D006657 ORTHO05D005964 2.2e-21 109.0 550 26.4
Dinv29204 Davidia involucrata HOM05D006657 ORTHO05D005964 2.8e-21 108.6 406 27.8
CANSAT21G0900 Cannabis sativa HOM05D006657 ORTHO05D005964 1.1e-20 106.7 337 27.9
arahy.Tifrunner.gnm1.ann1.UMZ78C Arachis hypogaea HOM05D006657 ORTHO05D005964 4.1e-20 104.8 341 27.9
Dinv17292 Davidia involucrata HOM05D006657 ORTHO05D005964 6.9e-20 104.0 358 30.4
FAN03G1526 Fragaria x ananassa HOM05D006657 ORTHO05D005964 5.9e-19 100.9 508 26.4
QL09p006779 Quercus lobata HOM05D006657 ORTHO05D005964 5.9e-19 100.9 496 25.6
FvH4_7g33030 Fragaria vesca HOM05D006657 ORTHO05D005964 2.2e-18 99.0 498 25.5
FAN10G1617 Fragaria x ananassa HOM05D006657 ORTHO05D005964 2.2e-18 99.0 498 25.1
MD01G1229500 Malus domestica HOM05D006657 ORTHO05D005964 2.2e-18 99.0 474 25.5
Atru.chr12.2479 Acer truncatum HOM05D006657 ORTHO05D005964 6.5e-18 97.4 319 29.2
FAN10G2847 Fragaria x ananassa HOM05D006657 ORTHO05D005964 6.5e-18 97.4 490 25.5
GSVIVG01038660001 Vitis vinifera HOM05D006657 ORTHO05D005964 8.5e-18 97.1 367 27.8
Ciclev10018632m.g Citrus clementina HOM05D006657 ORTHO05D005964 1.4e-17 96.3 470 26.4
Duzib084G0166 Durio zibethinus HOM05D006657 ORTHO05D005964 5.5e-17 94.4 312 28.5
Lalb_Chr11g0067471 Lupinus albus HOM05D006657 ORTHO05D005964 7.2e-17 94.0 427 24.4
MD07G1301500 Malus domestica HOM05D006657 ORTHO05D005964 7.2e-17 94.0 325 29.2
Sabra15G0002400 Salix brachista HOM05D006657 ORTHO05D005964 9.4e-17 93.6 492 24.8
Lalb_Chr23g0272001 Lupinus albus HOM05D006657 ORTHO05D005964 1.6e-16 92.8 348 25.9
Duzib068G0081 Durio zibethinus HOM05D006657 ORTHO05D005964 1.4e-15 89.7 400 26.0
arahy.Tifrunner.gnm1.ann1.UB23H3 Arachis hypogaea HOM05D006657 ORTHO05D005964 1.8e-15 89.4 123 39.8
Potri.015G003700 Populus trichocarpa HOM05D006657 ORTHO05D005964 1.8e-15 89.4 468 24.4
TAR629G2606 Trochodendron aralioides HOM05D006657 ORTHO05D005964 1.8e-15 89.4 423 25.5
COL.COLO4_14382 Corchorus olitorius HOM05D006657 ORTHO05D005964 3.9e-15 88.2 483 25.3
CSS0010102 Camellia sinensis var. sinensis HOM05D006657 ORTHO05D005964 6.7e-15 87.4 320 28.1
Cfa016147 Carpinus fangiana HOM05D006657 ORTHO05D005964 8.8e-15 87.0 611 23.9
PGR042G1854 Punica granatum HOM05D006657 ORTHO05D005964 8.8e-15 87.0 446 24.9
vmacro06453 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 1.1e-14 86.7 276 30.1
Haze_00307 Corylus avellana HOM05D006657 ORTHO05D005964 4.4e-14 84.7 399 28.3
Manes.01G044100 Manihot esculenta HOM05D006657 ORTHO05D005964 5.7e-14 84.3 468 24.8
Sabra12G0004100 Salix brachista HOM05D006657 ORTHO05D005964 5.7e-14 84.3 488 24.8
CiPaw.05G206100 Carya illinoinensis HOM05D006657 ORTHO05D005964 4.8e-13 81.3 421 24.9
Glyma.04G227100 Glycine max HOM05D006657 ORTHO05D005964 4.8e-13 81.3 328 25.3
Sabra12G0008600 Salix brachista HOM05D006657 ORTHO05D005964 8.2e-13 80.5 505 23.6
vmacro10166 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 1.4e-12 79.7 292 29.1
Glyma.06G138000 Glycine max HOM05D006657 ORTHO05D005964 4.1e-12 78.2 338 27.2
Gohir.D08G117100 Gossypium hirsutum HOM05D006657 ORTHO05D005964 2.0e-11 75.9 386 26.4
Lj1g0002697 Lotus japonicus HOM05D006657 ORTHO05D005964 2.6e-11 75.5 324 26.2
Gohir.A08G105800 Gossypium hirsutum HOM05D006657 ORTHO05D005964 3.5e-11 75.1 386 26.9
Medtr3g093000 Medicago truncatula HOM05D006657 ORTHO05D005964 3.5e-11 75.1 347 25.6
Actinidia08706 Actinidia chinensis HOM05D006657 ORTHO05D005964 4.5e-11 74.7 437 23.8
Rhsim09G0210400 Rhododendron simsii HOM05D006657 ORTHO05D005964 5.9e-11 74.3 279 28.7
Peaxi162Scf00912g00114 Petunia axillaris HOM05D006657 ORTHO05D005964 1.0e-10 73.6 275 28.4
Potri.012G007000 Populus trichocarpa HOM05D006657 ORTHO05D005964 1.0e-10 73.6 451 26.2
TPR.G33400 Trifolium pratense HOM05D006657 ORTHO05D005964 1.3e-10 73.2 325 26.2
Nitab4.5_0006821g0010 Nicotiana tabacum HOM05D006657 ORTHO05D005964 1.7e-10 72.8 349 27.2
Nitab4.5_0000021g0080 Nicotiana tabacum HOM05D006657 ORTHO05D005964 2.9e-10 72.0 349 27.2
Gorai.004G125800 Gossypium raimondii HOM05D006657 ORTHO05D005964 3.8e-10 71.6 390 25.6
Rhsim03G0216600 Rhododendron simsii HOM05D006657 ORTHO05D005964 5.0e-10 71.2 295 26.1
Actinidia34275 Actinidia chinensis HOM05D006657 ORTHO05D005964 6.5e-10 70.9 404 25.2
PGSC0003DMG400000558 Solanum tuberosum HOM05D006657 ORTHO05D005964 3.2e-09 68.6 322 27.3
Sopen03g021870 Solanum pennellii HOM05D006657 ORTHO05D005964 4.2e-09 68.2 292 29.8
Ca_16789_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 5.5e-09 67.8 428 21.7
Ca_16805_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 5.5e-09 67.8 428 21.7
CAN.G303.40 Capsicum annuum HOM05D006657 ORTHO05D005964 7.2e-09 67.4 324 27.8
Potri.001G452300 Populus trichocarpa HOM05D011672 ORTHO05D011012 9.4e-09 67.0 372 25.3
Psat5g071280 Pisum sativum HOM05D006657 ORTHO05D005964 2.1e-08 65.9 273 24.9
Solyc03g080140.3 Solanum lycopersicum HOM05D006657 ORTHO05D005964 6.1e-08 64.3 292 27.1
Nn1g05264 Nelumbo nucifera HOM05D006657 ORTHO05D005964 5.2e-07 61.2 286 25.5
Sabra11G0134500 Salix brachista HOM05D011672 ORTHO05D011012 5.2e-07 61.2 109 30.3
VMungo1309G0886 Vigna mungo HOM05D006657 ORTHO05D005964 6.7e-07 60.8 51 56.9
FAN01G2018 Fragaria x ananassa HOM05D006657 ORTHO05D005964 1.5e-06 59.7 70 41.4
Sed0019147 Sechium edule HOM05D006657 ORTHO05D005964 3.3e-06 58.5 305 25.6
Potri.011G149601 Populus trichocarpa HOM05D011672 ORTHO05D011012 7.4e-06 57.4 299 25.4
Sabra16G0305400 Salix brachista HOM05D011672 ORTHO05D011012 7.4e-06 57.4 313 23.6
Cc07_g20200 Coffea canephora HOM05D006657 ORTHO05D005964 9.7e-06 57.0 333 24.9
Lalb_Chr18g0054711 Lupinus albus HOM05D013241 ORTHO05D011012 9.7e-06 57.0 308 25.6


User provided reference genes

Program Settings