Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K00429 Eucalyptus grandis HOM05D003457 ORTHO05D009249 4.7e-178 627.9 345 100.0
PGR142G1344 Punica granatum HOM05D003457 ORTHO05D009249 3.3e-62 243.0 339 49.3
Gohir.D04G000050 Gossypium hirsutum HOM05D003457 ORTHO05D009249 3.6e-45 186.4 359 41.5
Manes.01G043100 Manihot esculenta HOM05D003457 ORTHO05D009249 2.9e-42 176.8 363 40.8
Thecc.03G208400 Theobroma cacao HOM05D003457 ORTHO05D009249 6.4e-42 175.6 357 37.8
Ciclev10020653m.g Citrus clementina HOM05D003457 ORTHO05D009249 9.3e-41 171.8 340 35.9
Duzib084G1096 Durio zibethinus HOM05D003457 ORTHO05D009249 2.7e-40 170.2 363 39.1
Gorai.012G000700 Gossypium raimondii HOM05D003457 ORTHO05D009249 2.7e-40 170.2 369 38.5
Dinv29212 Davidia involucrata HOM05D003457 ORTHO05D009249 1.7e-39 167.5 362 37.0
Dinv35380 Davidia involucrata HOM05D003457 ORTHO05D009746 2.3e-39 167.2 366 38.0
Duzib205G0475 Durio zibethinus HOM05D003457 ORTHO05D009249 7.3e-38 162.2 361 39.3
Gohir.D04G000080 Gossypium hirsutum HOM05D003457 ORTHO05D009249 1.3e-37 161.4 349 39.0
TWI23G0841 Tripterygium wilfordii HOM05D003457 ORTHO05D009249 2.8e-37 160.2 339 38.1
Duzib068G0780 Durio zibethinus HOM05D003457 ORTHO05D009249 1.1e-36 158.3 314 40.8
MD07G1298800 Malus domestica HOM05D003457 ORTHO05D009249 1.8e-36 157.5 371 40.4
Cfa016162 Carpinus fangiana HOM05D003457 ORTHO05D009249 9.0e-36 155.2 352 38.9
CiPaw.06G041400 Carya illinoinensis HOM05D003457 ORTHO05D009249 1.5e-35 154.5 369 41.5
Cpa.g.sc3.155 Carica papaya HOM05D003457 ORTHO05D009249 3.8e-34 149.8 322 37.3
Prupe.2G318600 Prunus persica HOM05D003457 ORTHO05D009249 2.1e-32 144.1 405 36.8
Actinidia34268 Actinidia chinensis HOM05D003457 ORTHO05D009249 1.0e-31 141.7 347 38.6
FvH4_7g32890 Fragaria vesca HOM05D003457 ORTHO05D009249 1.0e-31 141.7 361 34.6
RcHm_v2.0_Chr1g0382841 Rosa chinensis HOM05D003457 ORTHO05D009249 1.3e-31 141.4 372 39.0
TAR629G1045 Trochodendron aralioides HOM05D003457 ORTHO05D009249 3.9e-31 139.8 307 35.5
FAN01G1561 Fragaria x ananassa HOM05D003457 ORTHO05D009746 5.1e-31 139.4 353 36.3
Nn1g00443 Nelumbo nucifera HOM05D003457 ORTHO05D009249 5.1e-31 139.4 373 34.0
FAN03G1743 Fragaria x ananassa HOM05D003457 ORTHO05D009746 6.7e-31 139.0 356 35.1
CSS0029860 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 1.5e-30 137.9 356 35.4
Migut.F00990 Erythranthe guttata HOM05D003457 ORTHO05D009249 1.5e-30 137.9 346 33.5
FAN10G0211 Fragaria x ananassa HOM05D003457 ORTHO05D009746 2.5e-30 137.1 352 34.7
Actinidia08697 Actinidia chinensis HOM05D003457 ORTHO05D009249 3.3e-30 136.7 351 39.3
CSS0022238 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 4.3e-30 136.3 356 35.4
MD01G1228100 Malus domestica HOM05D003457 ORTHO05D009249 1.6e-29 134.4 373 39.1
Rhsim03G0215300 Rhododendron simsii HOM05D003457 ORTHO05D009249 2.8e-29 133.7 263 39.9
TAR636G2436 Trochodendron aralioides HOM05D003457 ORTHO05D009249 3.7e-29 133.3 273 39.2
Sopen03g022030 Solanum pennellii HOM05D003457 ORTHO05D009249 6.2e-29 132.5 363 33.1
Cc02_g00840 Coffea canephora HOM05D003457 ORTHO05D009249 1.1e-28 131.7 366 34.2
MSTRG.31 Avicennia marina HOM05D003457 ORTHO05D009249 4.0e-28 129.8 347 34.0
Potri.015G005100 Populus trichocarpa HOM05D003457 ORTHO05D009249 4.0e-28 129.8 352 35.5
Nitab4.5_0000319g0070 Nicotiana tabacum HOM05D003457 ORTHO05D009249 6.9e-28 129.0 369 32.2
THA.LOC104798986 Tarenaya hassleriana HOM05D003457 ORTHO05D009249 9.0e-28 128.6 320 34.4
SalBow2G2220 Salvia bowleyana HOM05D003457 ORTHO05D009249 1.5e-27 127.9 350 36.0
Solyc03g081310.3 Solanum lycopersicum HOM05D003457 ORTHO05D009249 1.5e-27 127.9 366 32.2
Oeu037975.2 Olea europaea HOM05D003457 ORTHO05D009249 2.0e-27 127.5 290 36.2
ClCG00G005020 Citrullus lanatus HOM05D003457 ORTHO05D009249 3.4e-27 126.7 307 35.5
ClCG01G004590 Citrullus lanatus HOM05D003457 ORTHO05D009249 3.4e-27 126.7 307 35.5
ClCG01G004630 Citrullus lanatus HOM05D003457 ORTHO05D009249 3.4e-27 126.7 307 35.5
CsaV3_5G004840 Cucumis sativus L. HOM05D003457 ORTHO05D009249 5.8e-27 125.9 322 32.6
MELO3C033815.2 Cucumis melo HOM05D003457 ORTHO05D009249 1.7e-26 124.4 331 33.8
Peaxi162Scf00300g00833 Petunia axillaris HOM05D003457 ORTHO05D009249 3.8e-26 123.2 339 33.3
MBI12_g09299_MAGBIO Magnolia biondii HOM05D003457 ORTHO05D009249 1.1e-25 121.7 291 35.1
FAN10G3191 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.4e-25 121.3 349 35.2
PGSC0003DMG400000588 Solanum tuberosum HOM05D003457 ORTHO05D009249 1.4e-25 121.3 372 31.2
SGA_v2.0_scaffold141G35555 Striga asiatica HOM05D003457 ORTHO05D009249 2.4e-25 120.6 346 32.4
CiPaw.02G048700 Carya illinoinensis HOM05D003457 ORTHO05D009249 3.2e-25 120.2 194 47.9
EL10Ac3g05182 Beta vulgaris HOM05D003457 ORTHO05D009249 7.9e-24 115.5 347 36.3
Lsat_1_v5_gn_8_4361 Lactuca sativa HOM05D003457 ORTHO05D009249 1.0e-23 115.2 362 34.3
Nitab4.5_0005040g0050 Nicotiana tabacum HOM05D003457 ORTHO05D009249 1.3e-23 114.8 274 34.7
Sabra15G0003600 Salix brachista HOM05D003457 ORTHO05D009249 6.7e-23 112.5 291 39.2
COL.COLO4_14368 Corchorus olitorius HOM05D003457 ORTHO05D009249 4.3e-22 109.8 347 30.0
Lsat_1_v5_gn_7_20360 Lactuca sativa HOM05D003457 ORTHO05D009249 4.3e-22 109.8 284 36.6
AUR62006007 Chenopodium quinoa HOM05D003457 ORTHO05D009746 1.3e-21 108.2 249 36.1
Lsat_1_v5_gn_9_3980 Lactuca sativa HOM05D003457 ORTHO05D009249 2.8e-21 107.1 283 36.7
Sp2g22840 Schrenkiella parvula HOM05D003457 ORTHO05D009249 3.7e-21 106.7 369 32.5
Lsat_1_v5_gn_5_51360 Lactuca sativa HOM05D003457 ORTHO05D009249 6.2e-21 105.9 283 36.4
Aa31LG11G3740 Aethionema arabicum HOM05D003457 ORTHO05D009249 1.4e-20 104.8 291 35.4
AUR62035619 Chenopodium quinoa HOM05D003457 ORTHO05D009249 1.8e-20 104.4 297 31.0
CAN.G303.15 Capsicum annuum HOM05D003457 ORTHO05D009249 5.3e-20 102.8 353 31.2
Lsat_1_v5_gn_1_120581 Lactuca sativa HOM05D003457 ORTHO05D009249 9.0e-20 102.1 283 35.7
Thhalv10005511m.g Eutrema salsugineum HOM05D003457 ORTHO05D009249 1.2e-19 101.7 291 33.3
DCAR_020371 Daucus carota HOM05D003457 ORTHO05D009249 1.5e-19 101.3 265 35.1
CARHR188920 Cardamine hirsuta HOM05D003457 ORTHO05D009249 2.0e-19 100.9 342 30.1
Phvul.009G045300 Phaseolus vulgaris HOM05D003457 ORTHO05D009249 2.0e-19 100.9 246 34.6
VMungo1309G3135 Vigna mungo HOM05D003457 ORTHO05D009249 2.6e-19 100.5 242 34.3
Medtr3g092670 Medicago truncatula HOM05D003457 ORTHO05D009249 5.8e-19 99.4 271 33.2
Psat5g072040 Pisum sativum HOM05D003457 ORTHO05D009249 7.6e-19 99.0 269 30.9
Potri.012G021300 Populus trichocarpa HOM05D003457 ORTHO05D009249 1.7e-18 97.8 291 37.1
Glyma.04G228600 Glycine max HOM05D003457 ORTHO05D009249 2.2e-18 97.4 242 34.3
Lj1g0002342 Lotus japonicus HOM05D003457 ORTHO05D009249 2.2e-18 97.4 270 30.7
AL6G36090 Arabidopsis lyrata HOM05D003457 ORTHO05D009249 6.5e-18 95.9 313 31.3
Sc13g0010260 Simmondsia chinensis HOM05D003457 ORTHO05D009249 8.4e-18 95.5 355 31.8
Ah.07g204690 Amaranthus hybridus HOM05D003457 ORTHO05D009249 1.4e-17 94.7 240 32.9
Atru.chr12.2426 Acer truncatum HOM05D003457 ORTHO05D009249 1.9e-17 94.4 257 35.0
Carub.0006s2232 Capsella rubella HOM05D003457 ORTHO05D009249 3.2e-17 93.6 325 32.6
ATR1155G002 Amborella trichopoda HOM05D003457 ORTHO05D009249 4.2e-17 93.2 261 33.3
Sabra05G0139600 Salix brachista HOM05D003457 ORTHO05D009249 9.3e-17 92.0 278 35.3
Glyma.06G136400 Glycine max HOM05D003457 ORTHO05D009249 2.1e-16 90.9 243 33.3
HPP92_015415 Vanilla planifolia HOM05D003457 ORTHO05D009249 2.1e-16 90.9 315 29.5
Ca_16777_v3 Cicer arietinum L. HOM05D003457 ORTHO05D009249 3.5e-16 90.1 272 32.0
HanXRQChr08g0225921 Helianthus annuus HOM05D003457 ORTHO05D009249 3.5e-16 90.1 294 34.4
AT5G24500 Arabidopsis thaliana HOM05D003457 ORTHO05D009249 6.0e-16 89.4 264 30.3
Sabra12G0012300 Salix brachista HOM05D003457 ORTHO05D009249 7.9e-16 89.0 277 36.5
QL09p007211 Quercus lobata HOM05D003457 ORTHO05D009249 1.8e-15 87.8 327 35.2
C02p60250 Brassica napus HOM05D003457 ORTHO05D009249 8.7e-15 85.5 240 35.0
TPR.G33664 Trifolium pratense HOM05D003457 ORTHO05D009249 3.7e-13 80.1 261 30.3
A02p40300 Brassica napus HOM05D003457 ORTHO05D009249 4.8e-13 79.7 241 34.0
Aqoxy5G04336 Aquilegia oxysepala HOM05D003457 ORTHO05D009249 6.3e-13 79.3 329 30.4
BraA02t08999Z Brassica rapa HOM05D003457 ORTHO05D009249 6.3e-13 79.3 241 30.7
BcaC03g17967 Brassica carinata HOM05D003457 ORTHO05D009249 9.0e-12 75.5 326 30.4
PSO782G2427 Papaver somniferum HOM05D003457 ORTHO05D009249 2.0e-11 74.3 259 28.6
BcaB07g29912 Brassica carinata HOM05D003457 ORTHO05D009249 3.4e-11 73.6 315 28.3
BolC2t12082H Brassica oleracea HOM05D003457 ORTHO05D009249 3.4e-11 73.6 304 31.6
unitig_90.g27506 Utricularia gibba HOM05D003457 ORTHO05D009249 2.2e-10 70.9 181 32.6
Lalb_Chr08g0239631 Lupinus albus HOM05D003457 ORTHO05D009249 5.0e-10 69.7 222 29.3
Lsat_1_v5_gn_7_39641 Lactuca sativa HOM05D003457 ORTHO05D009249 3.0e-07 60.5 236 30.1
CDE01G0392 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 3.9e-07 60.1 273 27.5
ECA233G2997 Erigeron canadensis HOM05D003457 ORTHO05D009249 1.1e-06 58.5 291 30.2
Lsat_1_v5_gn_5_150000 Lactuca sativa HOM05D003457 ORTHO05D009249 1.1e-06 58.5 121 37.2
CDE02G1140 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 2.5e-06 57.4 275 27.6
ECA233G0397 Erigeron canadensis HOM05D003457 ORTHO05D009249 3.3e-06 57.0 41 65.9


User provided reference genes

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