Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K00315 Eucalyptus grandis HOM05D005720 ORTHO05D006984 0.0e+00 1936.4 1002 100.0
QL09p011597 Quercus lobata HOM05D005720 ORTHO05D006984 2.2e-228 796.6 1039 47.9
Cfa016346 Carpinus fangiana HOM05D005720 ORTHO05D006984 3.4e-221 772.7 1032 46.7
TWI39G1277 Tripterygium wilfordii HOM05D005720 ORTHO05D006984 2.2e-215 753.4 1026 45.9
Potri.012G033800 Populus trichocarpa HOM05D005720 ORTHO05D006984 2.8e-215 753.1 1019 46.6
Manes.06G155900 Manihot esculenta HOM05D005720 ORTHO05D006984 1.5e-211 740.7 1020 46.7
CiPaw.06G006200 Carya illinoinensis HOM05D005720 ORTHO05D006984 1.8e-209 733.8 1030 45.8
Sabra12G0022900 Salix brachista HOM05D005720 ORTHO05D006984 3.0e-209 733.0 1016 45.4
MD07G1283200 Malus domestica HOM05D005720 ORTHO05D006984 8.8e-209 731.5 1028 46.2
Thecc.03G190400 Theobroma cacao HOM05D005720 ORTHO05D006984 2.0e-208 730.3 1031 45.5
Prupe.2G305400 Prunus persica HOM05D005720 ORTHO05D006984 1.2e-200 704.5 1021 45.3
Duzib084G1243 Durio zibethinus HOM05D005720 ORTHO05D006984 1.7e-199 700.7 1031 44.4
MD01G1213400 Malus domestica HOM05D005720 ORTHO05D006984 1.4e-198 697.6 1026 44.9
FvH4_7g30790 Fragaria vesca HOM05D005720 ORTHO05D006984 7.7e-197 691.8 1035 44.5
Gohir.A09G183200 Gossypium hirsutum HOM05D005720 ORTHO05D006984 1.0e-196 691.4 1030 44.3
Gohir.D09G177900 Gossypium hirsutum HOM05D005720 ORTHO05D006984 1.0e-196 691.4 1030 44.3
GSVIVG01028746001 Vitis vinifera HOM05D005720 ORTHO05D006984 9.5e-195 684.9 1024 44.0
COL.COLO4_24780 Corchorus olitorius HOM05D005720 ORTHO05D006984 2.8e-194 683.3 1084 42.9
FAN03G0014 Fragaria x ananassa HOM05D005720 ORTHO05D006984 6.1e-194 682.2 1028 44.6
FAN06G1427 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.0e-193 681.4 1042 43.9
FAN06G3446 Fragaria x ananassa HOM05D005720 ORTHO05D006984 4.4e-192 676.0 1039 43.8
FAN01G1865 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.4e-190 671.0 1039 43.4
Haze_00092 Corylus avellana HOM05D005720 ORTHO05D006984 1.6e-186 657.5 1028 43.4
Gorai.006G200000 Gossypium raimondii HOM05D005720 ORTHO05D006984 4.0e-185 652.9 1029 43.1
Dinv28352 Davidia involucrata HOM05D005720 ORTHO05D006984 5.7e-184 649.0 1028 43.0
FAN10G0387 Fragaria x ananassa HOM05D005720 ORTHO05D006984 3.3e-179 633.3 1018 42.8
Nn1g01775 Nelumbo nucifera HOM05D005720 ORTHO05D006984 7.0e-174 615.5 1029 41.0
Rhsim03G0197100 Rhododendron simsii HOM05D005720 ORTHO05D006984 3.3e-171 606.7 1023 40.8
RcHm_v2.0_Chr1g0379731 Rosa chinensis HOM05D005720 ORTHO05D006984 3.3e-171 606.7 900 44.9
arahy.Tifrunner.gnm1.ann1.YA4Y9S Arachis hypogaea HOM05D005720 ORTHO05D006984 2.9e-167 593.6 1073 39.4
Hma1.2p1_0142F.1_g064130 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 6.4e-167 592.4 1024 39.1
arahy.Tifrunner.gnm1.ann1.35A5BC Arachis hypogaea HOM05D005720 ORTHO05D006984 3.2e-166 590.1 1074 39.4
CsaV3_4G002370 Cucumis sativus L. HOM05D005720 ORTHO05D006984 1.7e-164 584.3 1030 40.8
Aqoxy7G00210 Aquilegia oxysepala HOM05D005720 ORTHO05D006984 1.2e-162 578.2 1032 40.2
AUR62031469 Chenopodium quinoa HOM05D005720 ORTHO05D006984 4.7e-162 576.2 1029 39.5
Hund11695 Selenicereus undatus HOM05D005720 ORTHO05D006984 6.8e-161 572.4 1010 39.0
Cpa.g.sc3.32 Carica papaya HOM05D005720 ORTHO05D006984 1.5e-160 571.2 1012 40.4
MELO3C017804.2 Cucumis melo HOM05D005720 ORTHO05D006984 2.2e-159 567.4 990 40.6
FAN10G2558 Fragaria x ananassa HOM05D005720 ORTHO05D006984 3.8e-159 566.6 842 43.2
THA.LOC104825125 Tarenaya hassleriana HOM05D005720 ORTHO05D006984 5.4e-158 562.8 1026 40.9
MD01G1213200 Malus domestica HOM05D005720 ORTHO05D006984 2.3e-156 557.4 871 42.7
EL10Ac3g05366 Beta vulgaris HOM05D005720 ORTHO05D006984 3.6e-154 550.1 1034 37.7
Thhalv10012590m.g Eutrema salsugineum HOM05D005720 ORTHO05D006984 4.2e-150 536.6 1024 39.3
Lalb_Chr06g0161451 Lupinus albus HOM05D005720 ORTHO05D006984 5.4e-150 536.2 1030 37.9
Ca_27881_v3 Cicer arietinum L. HOM05D005720 ORTHO05D006984 2.1e-149 534.3 1028 38.3
Cc02_g02050 Coffea canephora HOM05D005720 ORTHO05D006984 2.7e-149 533.9 1028 37.8
Glyma.16G069100 Glycine max HOM05D005720 ORTHO05D006984 3.5e-149 533.5 1036 38.4
TPR.G16464 Trifolium pratense HOM05D005720 ORTHO05D006984 1.1e-147 528.5 1025 38.7
Ah.07g206170 Amaranthus hybridus HOM05D005720 ORTHO05D006984 7.3e-147 525.8 1036 37.1
Oeu037117.2 Olea europaea HOM05D005720 ORTHO05D006984 7.3e-147 525.8 1027 37.0
MBI06_g04292_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 6.2e-146 522.7 1053 37.1
TAR636G3648 Trochodendron aralioides HOM05D005720 ORTHO05D006984 2.4e-145 520.8 778 42.5
PGR142G3228 Punica granatum HOM05D005720 ORTHO05D006984 5.3e-145 519.6 1022 37.7
AL8G27450 Arabidopsis lyrata HOM05D005720 ORTHO05D006984 9.0e-145 518.8 1025 38.0
Lj3g0007394 Lotus japonicus HOM05D005720 ORTHO05D006984 2.6e-144 517.3 1032 37.8
CARHR265920 Cardamine hirsuta HOM05D005720 ORTHO05D006984 4.5e-144 516.5 1020 37.0
PSO384G4812 Papaver somniferum HOM05D005720 ORTHO05D006984 3.8e-143 513.5 1014 37.3
Aa31LG3G9180 Aethionema arabicum HOM05D005720 ORTHO05D006984 8.4e-143 512.3 1023 37.1
SalBow4G2908 Salvia bowleyana HOM05D005720 ORTHO05D006984 1.1e-142 511.9 1009 38.9
HanXRQChr01g0031161 Helianthus annuus HOM05D005720 ORTHO05D006984 2.4e-142 510.8 1019 38.0
HanXRQChr11g0353671 Helianthus annuus HOM05D005720 ORTHO05D006984 2.4e-142 510.8 1009 39.4
SalBow4G2744 Salvia bowleyana HOM05D005720 ORTHO05D006984 2.4e-142 510.8 1009 38.9
PSO135G0324 Papaver somniferum HOM05D005720 ORTHO05D006984 2.7e-141 507.3 1014 37.0
AT5G52950 Arabidopsis thaliana HOM05D005720 ORTHO05D006984 6.0e-141 506.1 1020 37.6
Actinidia08611 Actinidia chinensis HOM05D005720 ORTHO05D006984 2.3e-140 504.2 904 39.7
MSTRG.27056 Avicennia marina HOM05D005720 ORTHO05D006984 5.1e-140 503.1 1026 36.8
Medtr8g058270 Medicago truncatula HOM05D005720 ORTHO05D006984 2.8e-138 497.3 995 37.2
Carub.0008s1313 Capsella rubella HOM05D005720 ORTHO05D006984 6.2e-138 496.1 1031 36.8
Sc13g0009450 Simmondsia chinensis HOM05D005720 ORTHO05D006984 9.0e-137 492.3 1031 36.0
C02p19150 Brassica napus HOM05D005720 ORTHO05D006984 5.8e-136 489.6 1029 36.8
DCAR_010640 Daucus carota HOM05D005720 ORTHO05D006984 1.4e-134 485.0 1022 36.9
BolC2t08045H Brassica oleracea HOM05D005720 ORTHO05D006984 3.2e-134 483.8 1029 36.7
BcaC03g14481 Brassica carinata HOM05D005720 ORTHO05D006984 9.3e-134 482.3 1025 36.8
ClCG07G011830 Citrullus lanatus HOM05D005720 ORTHO05D006984 7.9e-133 479.2 1024 36.5
C09p42670 Brassica napus HOM05D005720 ORTHO05D006984 1.0e-132 478.8 1027 36.5
BolC9t57143H Brassica oleracea HOM05D005720 ORTHO05D006984 1.0e-132 478.8 1027 36.5
Lsat_1_v5_gn_1_45000 Lactuca sativa HOM05D005720 ORTHO05D006984 8.7e-132 475.7 990 38.5
A02p11480 Brassica napus HOM05D005720 ORTHO05D006984 1.9e-131 474.6 1030 37.0
Sp6g15110 Schrenkiella parvula HOM05D005720 ORTHO05D006984 5.6e-131 473.0 1024 36.6
TAR629G0723 Trochodendron aralioides HOM05D005720 ORTHO05D006984 5.6e-131 473.0 772 39.9
BraA02t06213Z Brassica rapa HOM05D005720 ORTHO05D006984 1.3e-130 471.9 1020 36.7
ECA248G2416 Erigeron canadensis HOM05D005720 ORTHO05D006984 1.1e-129 468.8 1031 37.0
Nitab4.5_0000472g0110 Nicotiana tabacum HOM05D005720 ORTHO05D006984 4.0e-129 466.8 1008 36.0
Solyc03g007550.4 Solanum lycopersicum HOM05D005720 ORTHO05D006984 9.0e-129 465.7 1010 35.9
AUR62021063 Chenopodium quinoa HOM05D005720 ORTHO05D006984 2.2e-127 461.1 1021 35.6
Sopen03g003510 Solanum pennellii HOM05D005720 ORTHO05D006984 4.9e-127 459.9 1015 35.8
VMungo1127G0215 Vigna mungo HOM05D005720 ORTHO05D006984 1.1e-126 458.8 1006 36.2
Migut.F00255 Erythranthe guttata HOM05D005720 ORTHO05D006984 7.9e-125 452.6 1019 36.5
CAN.G108.10 Capsicum annuum HOM05D005720 ORTHO05D006984 2.0e-120 438.0 1023 35.3
Peaxi162Scf00904g00464 Petunia axillaris HOM05D005720 ORTHO05D006984 1.4e-118 431.8 1019 34.6
Psat4g140280 Pisum sativum HOM05D005720 ORTHO05D006984 4.2e-118 430.3 893 36.4
SHI10811 Sapria himalayana HOM05D005720 ORTHO05D006984 6.5e-103 379.8 904 33.0
SGA_v2.0_scaffold192G40596 Striga asiatica HOM05D005720 ORTHO05D006984 8.5e-103 379.4 972 33.5
Phvul.011G167400 Phaseolus vulgaris HOM05D005720 ORTHO05D006984 1.3e-98 365.5 667 39.4
HPP92_005221 Vanilla planifolia HOM05D005720 ORTHO05D006984 1.0e-95 355.9 977 32.3
vmacro06588 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 3.8e-95 354.0 644 39.9
CDE02G2607 Ceratophyllum demersum HOM05D005720 ORTHO05D006984 9.4e-94 349.4 891 32.3
unitig_747.g21855 Utricularia gibba HOM05D000121 ORTHO05D000102 2.1e-93 348.2 1048 30.8
Hma1.2p1_1891F.1_g306670 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 8.8e-92 342.8 938 31.8
Nitab4.5_0001331g0120 Nicotiana tabacum HOM05D005720 ORTHO05D006984 7.0e-89 333.2 1007 31.0
BcaB08g35658 Brassica carinata HOM05D005720 ORTHO05D006984 1.1e-81 309.3 621 34.9
Zm00001eb119640 Zea mays HOM05D005720 ORTHO05D006984 5.4e-81 307.0 1045 29.1
ATR1131G019 Amborella trichopoda HOM05D005720 ORTHO05D006984 7.7e-80 303.1 1031 30.2
Hma1.2p1_0142F.1_g064120 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 1.0e-79 302.8 478 39.7
Lj3A914T79 Lonicera japonica HOM05D005720 ORTHO05D006984 2.3e-79 301.6 591 39.3
CSS0019438 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 1.7e-74 285.4 477 42.1
SEGI_30168 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 5.0e-71 273.9 1104 27.5
Sed0011275 Sechium edule HOM05D005720 ORTHO05D006984 4.1e-65 254.2 360 44.2
CSS0038820 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 2.7e-64 251.5 478 40.2
Hma1.2p1_0142F.1_g064140 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 5.0e-63 247.3 388 42.8
Lj3P914T60 Lonicera japonica HOM05D005720 ORTHO05D006984 3.4e-59 234.6 336 43.8
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 2.2e-58 231.9 466 39.1
HPP92_005214 Vanilla planifolia HOM05D005720 ORTHO05D006984 1.6e-56 225.7 963 26.9
BcaB05g21993 Brassica carinata HOM05D005720 ORTHO05D006984 3.5e-56 224.6 1014 27.5
TAR629G3278 Trochodendron aralioides HOM05D005720 ORTHO05D006984 8.6e-47 193.4 248 51.6
vmacro06589 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 3.2e-41 174.9 304 41.4
BraA10t43127Z Brassica rapa HOM05D005720 ORTHO05D006984 9.2e-41 173.3 316 39.6
MBI16_g03131_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 4.0e-36 157.9 430 30.0
PGSC0003DMG400006595 Solanum tuberosum HOM05D005720 ORTHO05D006984 1.7e-34 152.5 249 44.2
Os01g0222300 Oryza sativa ssp. japonica HOM05D005720 ORTHO05D006984 4.9e-34 151.0 356 34.3
SEGI_32546 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 2.4e-25 122.1 825 22.1
SHI10812 Sapria himalayana HOM05D005720 ORTHO05D006984 8.4e-18 97.1 184 42.4
RcHm_v2.0_Chr1g0379741 Rosa chinensis HOM05D005720 ORTHO05D006984 2.6e-11 75.5 84 54.8
MSTRG.8687 Avicennia marina HOM05D005720 ORTHO05D006984 4.3e-06 58.2 144 39.6


User provided reference genes

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