Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 2.1e-62 242.3 131 100.0
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 3.4e-36 155.2 133 66.2
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 1.4e-34 149.8 130 65.4
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 1.4e-34 149.8 130 65.4
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 2.4e-34 149.1 133 65.4
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.2e-33 146.7 133 66.9
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 1.2e-33 146.7 127 66.9
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 2.1e-33 146.0 133 64.7
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 3.5e-33 145.2 131 63.4
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 3.5e-33 145.2 131 65.6
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 1.3e-32 143.3 119 66.4
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 3.9e-32 141.7 133 63.9
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 5.1e-32 141.4 131 64.9
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 1.5e-31 139.8 134 61.2
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 2.5e-31 139.0 121 67.8
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 4.3e-31 138.3 135 62.2
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 4.3e-31 138.3 131 60.3
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 4.3e-31 138.3 133 61.7
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 4.3e-31 138.3 135 61.5
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 4.3e-31 138.3 131 61.8
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 7.4e-31 137.5 132 63.6
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 2.1e-30 136.0 105 69.5
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 2.8e-30 135.6 133 63.9
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 2.8e-30 135.6 131 61.1
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 2.8e-30 135.6 131 61.1
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 2.8e-30 135.6 155 54.2
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 3.6e-30 135.2 131 61.1
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 6.2e-30 134.4 131 59.5
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 6.2e-30 134.4 108 68.5
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 8.1e-30 134.0 136 60.3
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 1.1e-29 133.7 105 69.5
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 1.1e-29 133.7 136 59.6
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 1.1e-29 133.7 137 62.0
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 1.8e-29 132.9 132 60.6
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 1.8e-29 132.9 132 62.1
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 4.0e-29 131.7 131 59.5
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 1.2e-28 130.2 108 67.6
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 1.5e-28 129.8 124 57.3
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 2.6e-28 129.0 107 65.4
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 3.4e-28 128.6 132 57.6
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 3.4e-28 128.6 133 58.6
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 9.9e-28 127.1 131 56.5
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 1.3e-27 126.7 107 67.3
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 1.3e-27 126.7 133 57.9
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 1.7e-27 126.3 132 59.1
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 2.9e-27 125.6 118 56.8
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 2.9e-27 125.6 107 68.2
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 2.9e-27 125.6 115 66.1
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 2.9e-27 125.6 133 58.6
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 6.4e-27 124.4 135 57.8
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 6.4e-27 124.4 135 57.8
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 8.4e-27 124.0 156 51.3
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 1.1e-26 123.6 119 61.3
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 1.4e-26 123.2 133 59.4
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 1.9e-26 122.9 131 56.5
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 1.9e-26 122.9 104 62.5
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 2.4e-26 122.5 110 63.6
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 2.4e-26 122.5 131 57.3
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 2.4e-26 122.5 131 55.0
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 5.5e-26 121.3 133 55.6
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 7.1e-26 120.9 112 63.4
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 1.2e-25 120.2 131 53.4
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 2.1e-25 119.4 131 55.7
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 2.7e-25 119.0 132 53.8
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 2.7e-25 119.0 132 53.8
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 2.7e-25 119.0 101 64.4
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 2.7e-25 119.0 109 61.5
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 6.0e-25 117.9 133 54.1
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 7.9e-25 117.5 135 56.3
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 7.9e-25 117.5 114 55.3
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 7.9e-25 117.5 114 55.3
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 7.9e-25 117.5 114 55.3
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 7.9e-25 117.5 109 61.5
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 1.0e-24 117.1 131 54.2
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 1.8e-24 116.3 131 53.4
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 1.8e-24 116.3 101 61.4
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 2.3e-24 115.9 131 53.4
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 6.7e-24 114.4 131 51.9
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 8.7e-24 114.0 106 58.5
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 1.5e-23 113.2 78 74.4
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 4.3e-23 111.7 101 61.4
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 4.3e-23 111.7 131 50.4
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 5.6e-23 111.3 86 68.6
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 9.6e-23 110.5 131 48.9
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 9.6e-23 110.5 77 76.6
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 9.6e-23 110.5 77 76.6
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 1.3e-22 110.2 131 48.9
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 1.3e-22 110.2 115 53.0
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 2.1e-22 109.4 115 52.2
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 2.8e-22 109.0 111 59.5
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 2.8e-22 109.0 112 57.1
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 8.1e-22 107.5 131 51.9
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 1.4e-21 106.7 160 46.2
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 1.8e-21 106.3 124 50.0
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 2.4e-21 105.9 135 51.1
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 4.0e-21 105.1 131 55.0
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 9.0e-21 104.0 108 57.4
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 1.5e-20 103.2 108 57.4
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 3.4e-20 102.1 78 67.9
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 3.4e-20 102.1 78 67.9
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 4.5e-20 101.7 94 59.6
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 1.7e-19 99.8 143 51.7
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 8.4e-19 97.4 108 53.7
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 9.3e-18 94.0 131 48.1
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 1.3e-16 90.1 133 45.9
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 1.1e-13 80.5 70 57.1
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 1.2e-12 77.0 77 58.4
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 5.9e-12 74.7 133 42.1
Mapoly0084s0018 Marchantia polymorpha HOM05D007045 ORTHO05D008872 1.9e-10 69.7 135 41.5
CBR_g50944 Chara braunii HOM05D007045 ORTHO05D008872 1.0e-08 63.9 156 36.5
Pp3c13_5290 Physcomitrium patens HOM05D007045 ORTHO05D008872 8.7e-08 60.8 121 42.1
Pp3c4_15620 Physcomitrium patens HOM05D007045 ORTHO05D008872 4.8e-06 55.1 127 39.4


User provided reference genes

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