Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K00073 Eucalyptus grandis HOM05D004457 ORTHO05D005282 1.9e-184 649.0 327 100.0
PGR142G0056 Punica granatum HOM05D004457 ORTHO05D005282 4.5e-138 495.0 327 74.3
Thecc.05G219000 Theobroma cacao HOM05D004457 ORTHO05D005282 5.0e-137 491.5 327 74.6
Manes.09G128300 Manihot esculenta HOM05D004457 ORTHO05D005282 6.5e-137 491.1 327 73.7
Atru.chr12.1918 Acer truncatum HOM05D004457 ORTHO05D005282 3.6e-135 485.3 327 73.7
Prupe.2G328100 Prunus persica HOM05D004457 ORTHO05D005282 1.8e-134 483.0 327 72.2
TWI60G0869 Tripterygium wilfordii HOM05D004457 ORTHO05D005282 5.2e-134 481.5 327 72.2
Ciclev10021193m.g Citrus clementina HOM05D004457 ORTHO05D005282 1.5e-133 479.9 327 72.5
COL.COLO4_15192 Corchorus olitorius HOM05D004457 ORTHO05D005282 2.8e-132 475.7 327 71.3
Potri.013G079101 Populus trichocarpa HOM05D004457 ORTHO05D005282 5.4e-131 471.5 327 71.6
Potri.013G079201 Populus trichocarpa HOM05D004457 ORTHO05D005282 7.0e-131 471.1 327 71.6
MD07G1310300 Malus domestica HOM05D004457 ORTHO05D005282 4.5e-130 468.4 329 71.7
GSVIVG01024347001 Vitis vinifera HOM05D004457 ORTHO05D005282 7.7e-130 467.6 327 68.8
EL10Ac3g05054 Beta vulgaris HOM05D004457 ORTHO05D005282 2.3e-129 466.1 327 70.3
Actinidia34324 Actinidia chinensis HOM05D004457 ORTHO05D005282 6.6e-129 464.5 327 70.3
Actinidia08758 Actinidia chinensis HOM05D004457 ORTHO05D005282 1.1e-128 463.8 328 69.8
CSS0048555 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 1.5e-128 463.4 328 70.7
AUR62028201 Chenopodium quinoa HOM05D004457 ORTHO05D005282 2.5e-128 462.6 327 69.1
MD01G1237700 Malus domestica HOM05D004457 ORTHO05D005282 2.5e-128 462.6 329 70.8
CiPaw.06G035200 Carya illinoinensis HOM05D004457 ORTHO05D005282 7.2e-128 461.1 327 70.6
Cpa.g.sc43.116 Carica papaya HOM05D004457 ORTHO05D005282 1.2e-127 460.3 327 68.8
Cfa016064 Carpinus fangiana HOM05D004457 ORTHO05D005282 1.2e-127 460.3 327 70.3
Haze_00385 Corylus avellana HOM05D004457 ORTHO05D005282 2.1e-127 459.5 327 70.6
Gorai.003G055700 Gossypium raimondii HOM05D004457 ORTHO05D005282 2.1e-127 459.5 327 68.8
Glyma.11G009300 Glycine max HOM05D004457 ORTHO05D005282 3.6e-127 458.8 327 69.1
Gohir.D03G053500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 3.6e-127 458.8 327 69.1
RcHm_v2.0_Chr1g0384491 Rosa chinensis HOM05D004457 ORTHO05D005282 6.1e-127 458.0 328 68.3
CiPaw.05G214800 Carya illinoinensis HOM05D004457 ORTHO05D005282 8.0e-127 457.6 334 69.8
Gohir.A02G127500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.4e-126 456.8 327 68.8
CSS0037309 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 6.8e-126 454.5 327 68.8
Glyma.01G233500 Glycine max HOM05D004457 ORTHO05D005282 1.5e-125 453.4 327 68.8
Phvul.002G041000 Phaseolus vulgaris HOM05D004457 ORTHO05D005282 3.4e-125 452.2 327 68.8
CSS0045385 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 1.3e-124 450.3 327 68.5
Gorai.004G256600 Gossypium raimondii HOM05D004457 ORTHO05D005282 8.3e-124 447.6 327 66.4
FvH4_7g34140 Fragaria vesca HOM05D004457 ORTHO05D005282 1.4e-123 446.8 328 67.7
Nn6g33553 Nelumbo nucifera HOM05D004457 ORTHO05D005282 1.4e-123 446.8 327 66.7
Hund21100 Selenicereus undatus HOM05D004457 ORTHO05D005282 1.8e-123 446.4 327 68.2
vmacro06531 Vaccinium macrocarpon HOM05D004457 ORTHO05D005282 4.1e-123 445.3 393 59.8
Gohir.A08G221660 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.6e-122 443.4 327 66.1
arahy.Tifrunner.gnm1.ann1.R5JYMV Arachis hypogaea HOM05D004457 ORTHO05D005282 2.0e-122 443.0 328 66.8
Sabra13G0073500 Salix brachista HOM05D004457 ORTHO05D005282 5.9e-122 441.4 307 68.4
arahy.Tifrunner.gnm1.ann1.9FAL4E Arachis hypogaea HOM05D004457 ORTHO05D005282 7.8e-122 441.0 328 66.5
Hma1.2p1_0419F.1_g149440 Hydrangea macrophylla HOM05D004457 ORTHO05D005282 7.8e-122 441.0 367 59.9
CSS0031792 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 1.0e-121 440.7 311 70.1
FAN10G1543 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.0e-121 440.7 338 65.4
Lsat_1_v5_gn_8_3720 Lactuca sativa HOM05D004457 ORTHO05D005282 1.7e-121 439.9 327 67.9
Gohir.D08G241200 Gossypium hirsutum HOM05D004457 ORTHO05D005282 2.3e-121 439.5 327 65.7
TAR375G0461 Trochodendron aralioides HOM05D004457 ORTHO05D005282 3.9e-121 438.7 327 66.1
Rhsim03G0223200 Rhododendron simsii HOM05D004457 ORTHO05D005282 5.0e-121 438.3 380 58.4
LjContig00222g0016666 Lotus japonicus HOM05D004457 ORTHO05D005282 1.1e-120 437.2 328 68.0
Cc02_g00170 Coffea canephora HOM05D004457 ORTHO05D005282 4.3e-120 435.3 341 63.3
Oeu062823.1 Olea europaea HOM05D004457 ORTHO05D005282 4.3e-120 435.3 329 66.6
CiPaw.06G035100 Carya illinoinensis HOM05D004457 ORTHO05D005282 9.5e-120 434.1 327 65.4
VMungo1215G3184 Vigna mungo HOM05D004457 ORTHO05D005282 1.2e-119 433.7 327 65.4
Sc13g0010930 Simmondsia chinensis HOM05D004457 ORTHO05D005282 1.6e-119 433.3 311 68.5
Lalb_Chr09g0320121 Lupinus albus HOM05D004457 ORTHO05D005282 4.7e-119 431.8 327 65.1
AT1G65020 Arabidopsis thaliana HOM05D004457 ORTHO05D005282 1.4e-118 430.3 327 67.6
AL2G19640 Arabidopsis lyrata HOM05D004457 ORTHO05D005282 5.2e-118 428.3 327 67.0
Aqoxy3G02297 Aquilegia oxysepala HOM05D004457 ORTHO05D005282 2.0e-117 426.4 328 64.0
Lj3A885T46 Lonicera japonica HOM05D004457 ORTHO05D005282 2.0e-117 426.4 332 64.8
THA.LOC104805712 Tarenaya hassleriana HOM05D004457 ORTHO05D005282 2.0e-117 426.4 329 67.5
C06p38960 Brassica napus HOM05D004457 ORTHO05D005282 4.9e-116 421.8 327 66.4
BolC6t38988H Brassica oleracea HOM05D004457 ORTHO05D005282 4.9e-116 421.8 327 66.4
Carub.0002s1019 Capsella rubella HOM05D004457 ORTHO05D005282 3.2e-115 419.1 328 66.2
ClCG09G017170 Citrullus lanatus HOM05D004457 ORTHO05D005282 3.2e-115 419.1 328 64.9
Sp5g19410 Schrenkiella parvula HOM05D004457 ORTHO05D005282 4.1e-115 418.7 327 65.4
BraA07t30901Z Brassica rapa HOM05D004457 ORTHO05D005282 5.4e-115 418.3 327 66.1
Ca_24434_v3 Cicer arietinum L. HOM05D004457 ORTHO05D005282 1.2e-114 417.2 327 64.2
CsaV3_2G036630 Cucumis sativus L. HOM05D004457 ORTHO05D005282 2.0e-114 416.4 328 64.3
Sed0007489 Sechium edule HOM05D004457 ORTHO05D005282 4.6e-114 415.2 327 62.4
Aa31LG2G2220 Aethionema arabicum HOM05D004457 ORTHO05D005282 6.0e-114 414.8 345 62.0
Medtr5g007360 Medicago truncatula HOM05D004457 ORTHO05D005282 6.0e-114 414.8 327 63.0
PSO063G5530 Papaver somniferum HOM05D004457 ORTHO05D005282 1.0e-113 414.1 327 62.1
PSO782G5560 Papaver somniferum HOM05D004457 ORTHO05D005282 6.6e-113 411.4 327 61.5
Thhalv10022467m.g Eutrema salsugineum HOM05D004457 ORTHO05D005282 4.3e-112 408.7 327 64.5
CsaV3_3G050090 Cucumis sativus L. HOM05D004457 ORTHO05D005282 9.5e-112 407.5 327 62.4
Psat2g189240 Pisum sativum HOM05D004457 ORTHO05D005282 9.5e-112 407.5 328 62.2
BcaB05g25319 Brassica carinata HOM05D004457 ORTHO05D005282 1.6e-111 406.8 328 64.3
HanXRQChr04g0105271 Helianthus annuus HOM05D004457 ORTHO05D005282 2.1e-111 406.4 329 63.8
TPR.G37899 Trifolium pratense HOM05D004457 ORTHO05D005282 3.6e-111 405.6 368 57.9
Nitab4.5_0004530g0100 Nicotiana tabacum HOM05D004457 ORTHO05D005282 3.1e-110 402.5 327 63.3
A07p32750 Brassica napus HOM05D004457 ORTHO05D005282 2.0e-109 399.8 369 58.8
BraA02t06354Z Brassica rapa HOM05D004457 ORTHO05D005282 9.8e-109 397.5 337 60.8
Peaxi162Scf00516g00661 Petunia axillaris HOM05D004457 ORTHO05D005282 4.9e-108 395.2 327 63.0
BolC2t08250H Brassica oleracea HOM05D004457 ORTHO05D005282 1.1e-107 394.0 337 60.5
Solyc03g097180.3 Solanum lycopersicum HOM05D004457 ORTHO05D005282 3.2e-107 392.5 327 62.7
PGSC0003DMG400003162 Solanum tuberosum HOM05D004457 ORTHO05D005282 1.2e-106 390.6 327 62.1
C02p21100 Brassica napus HOM05D004457 ORTHO05D005282 2.1e-106 389.8 353 57.5
SGA_v2.0_scaffold50G18449 Striga asiatica HOM05D004457 ORTHO05D005282 5.1e-105 385.2 363 55.1
A02p12980 Brassica napus HOM05D004457 ORTHO05D005282 1.9e-104 383.3 363 56.5
Nitab4.5_0000021g0740 Nicotiana tabacum HOM05D004457 ORTHO05D005282 1.2e-103 380.6 318 62.6
MSTRG.26922 Avicennia marina HOM05D004457 ORTHO05D005282 1.6e-103 380.2 330 58.8
CAN.G1131.28 Capsicum annuum HOM05D004457 ORTHO05D005282 1.6e-103 380.2 312 61.9
FAN28G1138 Fragaria x ananassa HOM05D004457 ORTHO05D005282 3.6e-103 379.0 327 60.2
SalBow4G0372 Salvia bowleyana HOM05D004457 ORTHO05D005282 8.1e-103 377.9 328 59.5
SalBow2G1767 Salvia bowleyana HOM05D004457 ORTHO05D005282 1.4e-102 377.1 329 57.8
SalBow4G0893 Salvia bowleyana HOM05D004457 ORTHO05D005282 1.8e-102 376.7 328 59.1
MELO3C021859.2 Cucumis melo HOM05D004457 ORTHO05D005282 3.1e-102 375.9 287 67.6
Zm00001eb024890 Zea mays HOM05D004457 ORTHO05D005282 2.0e-101 373.2 332 56.6
Migut.F00082 Erythranthe guttata HOM05D004457 ORTHO05D005282 3.7e-100 369.0 329 57.8
unitig_90.g27538 Utricularia gibba HOM05D004457 ORTHO05D005282 8.3e-100 367.9 329 58.1
MSTRG.8 Avicennia marina HOM05D004457 ORTHO05D005282 1.1e-99 367.5 329 57.8
Oeu015511.1 Olea europaea HOM05D004457 ORTHO05D005282 1.1e-99 367.5 328 58.2
Peaxi162Scf00133g00612 Petunia axillaris HOM05D004457 ORTHO05D005282 7.1e-99 364.8 327 58.1
Duzib106G1483 Durio zibethinus HOM05D004457 ORTHO05D005282 1.7e-97 360.1 327 59.0
SGA_v2.0_scaffold44G16903 Striga asiatica HOM05D004457 ORTHO05D005282 2.3e-97 359.8 349 53.9
HPP92_001524 Vanilla planifolia HOM05D004457 ORTHO05D005282 3.3e-96 355.9 327 52.6
PSO541G4777 Papaver somniferum HOM05D004457 ORTHO05D005282 1.4e-94 350.5 366 52.2
CiPaw.06G035000 Carya illinoinensis HOM05D004457 ORTHO05D005282 2.4e-94 349.7 288 63.5
ATR0665G122 Amborella trichopoda HOM05D004457 ORTHO05D005282 9.9e-93 344.4 330 53.3
FAN01G1413 Fragaria x ananassa HOM05D004457 ORTHO05D005282 2.2e-92 343.2 308 59.4
Lj1A1034G49 Lonicera japonica HOM05D004457 ORTHO05D005282 2.7e-90 336.3 252 65.5
Actinidia28413 Actinidia chinensis HOM05D004457 ORTHO05D005282 1.7e-89 333.6 237 68.8
Nitab4.5_0004268g0020 Nicotiana tabacum HOM05D004457 ORTHO05D005282 1.1e-88 330.9 268 61.9
QL09p022526 Quercus lobata HOM05D004457 ORTHO05D005282 4.4e-85 318.9 280 60.4
Cfa016063 Carpinus fangiana HOM05D004457 ORTHO05D005282 3.5e-82 309.3 328 53.7
FAN25G0067 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.5e-80 303.9 324 52.5
Hund09804 Selenicereus undatus HOM05D004457 ORTHO05D005282 5.6e-80 302.0 311 51.4
Cfa016062 Carpinus fangiana HOM05D004457 ORTHO05D005282 2.1e-74 283.5 295 53.6
PSO675G5198 Papaver somniferum HOM05D004457 ORTHO05D005282 7.9e-74 281.6 263 57.8
Haze_00386 Corylus avellana HOM05D004457 ORTHO05D005282 2.8e-71 273.1 288 51.4
AUR62002084 Chenopodium quinoa HOM05D004457 ORTHO05D005282 4.8e-71 272.3 327 47.1
Sed0022448 Sechium edule HOM05D004457 ORTHO05D005282 1.4e-70 270.8 212 66.0
CDE02G1044 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 2.4e-70 270.0 250 54.4
CARHR056470 Cardamine hirsuta HOM05D004457 ORTHO05D005282 9.0e-70 268.1 212 65.1
SEGI_39651 Sequoiadendron giganteum HOM05D004457 ORTHO05D005282 4.5e-69 265.8 327 43.1
FAN03G1923 Fragaria x ananassa HOM05D004457 ORTHO05D005282 2.2e-68 263.5 174 72.4
Dinv29138 Davidia involucrata HOM05D004457 ORTHO05D005282 2.2e-60 236.9 143 81.8
ClCG09G013130 Citrullus lanatus HOM05D004457 ORTHO05D005282 5.7e-56 222.2 171 64.9
ECA233G5338 Erigeron canadensis HOM05D004457 ORTHO05D005282 5.7e-56 222.2 168 69.6
Gohir.A08G097750 Gossypium hirsutum HOM05D004457 ORTHO05D005282 3.2e-51 206.5 250 46.4
Sopen03g027920 Solanum pennellii HOM05D004457 ORTHO05D005282 7.2e-51 205.3 144 70.8
Nitab4.5_0000338g0060 Nicotiana tabacum HOM05D004457 ORTHO05D005282 2.3e-49 200.3 167 61.1
BolC4t27312H Brassica oleracea HOM05D004457 ORTHO05D005282 2.2e-47 193.7 160 62.5
ClCG09G013110 Citrullus lanatus HOM05D004457 ORTHO05D005282 1.8e-46 190.7 152 58.6
Dinv29137 Davidia involucrata HOM05D004457 ORTHO05D005282 5.5e-43 179.1 128 67.2
Mapoly0043s0014 Marchantia polymorpha HOM05D004457 ORTHO05D005282 3.0e-41 173.3 348 33.9
Migut.F00937 Erythranthe guttata HOM05D004457 ORTHO05D005282 2.6e-40 170.2 157 52.9
Pp3c11_5580 Physcomitrium patens HOM05D004457 ORTHO05D005282 6.3e-39 165.6 304 35.2
BcaC02g08145 Brassica carinata HOM05D004457 ORTHO05D005282 1.1e-35 154.8 121 63.6
SMO364G0318 Selaginella moellendorffii HOM05D004457 ORTHO05D005282 2.7e-34 150.2 212 38.2
AagrBONN_evm.TU.Sc2ySwM_228.2639 Anthoceros agrestis HOM05D004457 ORTHO05D005282 8.8e-33 145.2 242 33.9
Pp3c10_23490 Physcomitrium patens HOM05D004457 ORTHO05D005282 2.0e-32 144.1 327 32.1
ECA233G2641 Erigeron canadensis HOM05D004457 ORTHO05D005282 1.2e-29 134.8 119 62.2
DCAR_020421 Daucus carota HOM05D004457 ORTHO05D005282 4.5e-29 132.9 81 76.5
Sopen03g027940 Solanum pennellii HOM05D004457 ORTHO05D005282 6.1e-26 122.5 120 54.2
Nitab4.5_0000845g0010 Nicotiana tabacum HOM05D004457 ORTHO05D005282 7.0e-22 109.0 167 43.7
RcHm_v2.0_Chr7g0241921 Rosa chinensis HOM05D004457 ORTHO05D005282 9.1e-22 108.6 96 57.3
C07p33100 Brassica napus HOM05D004457 ORTHO05D005282 1.2e-21 108.2 75 70.7
BcaC06g34068 Brassica carinata HOM05D004457 ORTHO05D005282 2.7e-21 107.1 75 70.7
BolC9t54837H Brassica oleracea HOM05D004457 ORTHO05D005282 2.7e-21 107.1 75 70.7
MELO3C003309.2 Cucumis melo HOM05D004457 ORTHO05D005282 1.9e-19 100.9 86 61.6
CDE02G4136 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 3.2e-19 100.1 77 59.7
Medtr3g091660 Medicago truncatula HOM05D004457 ORTHO05D005282 2.7e-18 97.1 88 53.4
Gohir.A08G102425 Gossypium hirsutum HOM05D004457 ORTHO05D005282 4.7e-18 96.3 63 68.3
arahy.Tifrunner.gnm1.ann1.383HND Arachis hypogaea HOM05D004457 ORTHO05D005282 6.8e-17 92.4 61 77.0
QL09p022513 Quercus lobata HOM05D004457 ORTHO05D005282 1.4e-14 84.7 58 75.9
Medtr3g091670 Medicago truncatula HOM05D004457 ORTHO05D005282 1.5e-11 74.7 61 65.6
QL03p072618 Quercus lobata HOM05D000132 ORTHO05D000058 1.5e-11 74.7 54 72.2
arahy.Tifrunner.gnm1.ann1.G80LMI Arachis hypogaea HOM05D004457 ORTHO05D082520 1.4e-09 68.2 55 60.0


User provided reference genes

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