Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J03068 Eucalyptus grandis HOM05D007391 ORTHO05D009446 7.6e-178 627.5 423 100.0
Potri.001G202100 Populus trichocarpa HOM05D007391 ORTHO05D009446 1.6e-66 257.7 470 55.5
Sabra01G0159600 Salix brachista HOM05D007391 ORTHO05D009446 6.6e-65 252.3 460 55.7
Nn8g39512 Nelumbo nucifera HOM05D007391 ORTHO05D009446 2.8e-63 246.9 486 52.9
DCAR_016270 Daucus carota HOM05D007391 ORTHO05D009446 3.8e-60 236.5 477 54.1
TWI12G0860 Tripterygium wilfordii HOM05D007391 ORTHO05D009446 4.9e-60 236.1 442 55.9
CSS0028859 Camellia sinensis var. sinensis HOM05D007391 ORTHO05D009446 6.4e-60 235.7 484 55.4
Ciclev10025464m.g Citrus clementina HOM05D007391 ORTHO05D009446 6.4e-60 235.7 490 52.9
CSS0027290 Camellia sinensis var. sinensis HOM05D007391 ORTHO05D009446 8.4e-60 235.3 484 55.6
Actinidia01743 Actinidia chinensis HOM05D007391 ORTHO05D009446 2.4e-59 233.8 393 47.6
Dinv38125 Davidia involucrata HOM05D007391 ORTHO05D009446 1.0e-57 228.4 426 43.9
Lj5C73G6 Lonicera japonica HOM05D007391 ORTHO05D009446 1.3e-57 228.0 463 52.5
CARHR074420 Cardamine hirsuta HOM05D007391 ORTHO05D009446 3.0e-57 226.9 470 52.3
Thhalv10019584m.g Eutrema salsugineum HOM05D007391 ORTHO05D009446 6.6e-57 225.7 467 52.5
Prupe.3G087800 Prunus persica HOM05D007391 ORTHO05D009446 6.6e-57 225.7 434 51.2
Haze_16564 Corylus avellana HOM05D007391 ORTHO05D009446 1.5e-56 224.6 428 55.8
PGR031G3861 Punica granatum HOM05D007391 ORTHO05D009446 2.1e-55 220.7 490 49.6
THA.LOC104812512 Tarenaya hassleriana HOM05D007391 ORTHO05D009446 2.1e-55 220.7 482 51.7
CANSAT56G1818 Cannabis sativa HOM05D007391 ORTHO05D009446 1.4e-54 218.0 449 51.2
Gohir.A05G123000 Gossypium hirsutum HOM05D007391 ORTHO05D009446 1.2e-53 214.9 494 48.2
BcaC08g45291 Brassica carinata HOM05D007391 ORTHO05D009446 3.4e-53 213.4 470 52.1
AL2G41460 Arabidopsis lyrata HOM05D007391 ORTHO05D009446 4.4e-53 213.0 471 51.4
A07p26510 Brassica napus HOM05D007391 ORTHO05D009446 4.4e-53 213.0 481 50.9
C06p28930 Brassica napus HOM05D007391 ORTHO05D009446 5.8e-53 212.6 470 52.1
Rhsim08G0212800 Rhododendron simsii HOM05D007391 ORTHO05D009446 7.6e-53 212.2 467 52.7
Thecc.06G025300 Theobroma cacao HOM05D007391 ORTHO05D009446 9.9e-53 211.8 476 46.8
Gohir.D05G123900 Gossypium hirsutum HOM05D007391 ORTHO05D009446 1.3e-52 211.5 494 46.2
BolC6t38059H Brassica oleracea HOM05D007391 ORTHO05D009446 2.2e-52 210.7 470 51.7
BraA07t30294Z Brassica rapa HOM05D007391 ORTHO05D009446 2.2e-52 210.7 481 50.7
CSS0006296 Camellia sinensis var. sinensis HOM05D007391 ORTHO05D009446 2.2e-52 210.7 465 54.8
CsaV3_4G001720 Cucumis sativus L. HOM05D007391 ORTHO05D009446 2.9e-52 210.3 434 55.8
Gorai.009G127900 Gossypium raimondii HOM05D007391 ORTHO05D009446 3.8e-52 209.9 494 46.0
Aa31LG4G360 Aethionema arabicum HOM05D007391 ORTHO05D009446 4.9e-52 209.5 464 51.3
Glyma.13G365900 Glycine max HOM05D007391 ORTHO05D009446 1.1e-51 208.4 451 55.0
Cfa001957 Carpinus fangiana HOM05D007391 ORTHO05D001615 2.4e-51 207.2 421 55.3
CiPaw.01G248400 Carya illinoinensis HOM05D007391 ORTHO05D009446 3.2e-51 206.8 434 55.1
FAN05G3463 Fragaria x ananassa HOM05D007391 ORTHO05D009446 3.2e-51 206.8 404 57.4
Peaxi162Scf00034g00145 Petunia axillaris HOM05D007391 ORTHO05D009446 3.2e-51 206.8 461 53.4
PSO675G3521 Papaver somniferum HOM05D007391 ORTHO05D009446 4.6e-50 203.0 428 48.8
MELO3C017862.2 Cucumis melo HOM05D007391 ORTHO05D009446 7.8e-50 202.2 433 55.0
PSO541G2895 Papaver somniferum HOM05D007391 ORTHO05D009446 1.0e-49 201.8 431 54.1
FAN02G3910 Fragaria x ananassa HOM05D007391 ORTHO05D009446 3.0e-49 200.3 435 53.6
RcHm_v2.0_Chr2g0135241 Rosa chinensis HOM05D007391 ORTHO05D009446 3.9e-49 199.9 435 54.0
Sp5g35720 Schrenkiella parvula HOM05D007391 ORTHO05D009446 6.6e-49 199.1 464 51.7
BcaB02g07296 Brassica carinata HOM05D007391 ORTHO05D009446 8.7e-49 198.7 483 49.5
Duzib235G1403 Durio zibethinus HOM05D007391 ORTHO05D009446 1.5e-48 198.0 479 46.1
QL05p031418 Quercus lobata HOM05D007391 ORTHO05D009446 1.9e-48 197.6 483 51.1
PGSC0003DMG400028627 Solanum tuberosum HOM05D007391 ORTHO05D009446 1.9e-48 197.6 453 52.1
VMungo1080G1749 Vigna mungo HOM05D007391 ORTHO05D009446 1.9e-48 197.6 499 48.9
vmacro18998 Vaccinium macrocarpon HOM05D007391 ORTHO05D009446 9.6e-48 195.3 473 49.9
AT1G80080 Arabidopsis thaliana HOM05D007391 ORTHO05D009446 1.3e-47 194.9 484 50.0
arahy.Tifrunner.gnm1.ann1.9HLX1I Arachis hypogaea HOM05D007391 ORTHO05D009446 1.1e-46 191.8 451 52.1
arahy.Tifrunner.gnm1.ann1.QTUK9J Arachis hypogaea HOM05D007391 ORTHO05D009446 1.1e-46 191.8 451 52.1
FAN14G5578 Fragaria x ananassa HOM05D007391 ORTHO05D009446 1.1e-46 191.8 414 54.1
Manes.11G057100 Manihot esculenta HOM05D007391 ORTHO05D009446 1.1e-46 191.8 446 52.7
Phvul.005G178400 Phaseolus vulgaris HOM05D007391 ORTHO05D009446 1.4e-46 191.4 482 50.4
Cc08_g02940 Coffea canephora HOM05D007391 ORTHO05D009446 1.8e-46 191.0 493 50.7
Aqoxy7G03657 Aquilegia oxysepala HOM05D007391 ORTHO05D009446 3.1e-46 190.3 467 48.8
Dinv30607 Davidia involucrata HOM05D007391 ORTHO05D009446 1.2e-45 188.3 413 54.2
MD17G1212400 Malus domestica HOM05D007391 ORTHO05D009446 2.6e-45 187.2 434 53.5
FvH4_6g29640 Fragaria vesca HOM05D007391 ORTHO05D009446 4.5e-45 186.4 435 52.4
Hma1.2p1_0017F.1_g011310 Hydrangea macrophylla HOM05D007391 ORTHO05D009446 4.5e-45 186.4 416 47.1
SGA_v2.0_scaffold117G32353 Striga asiatica HOM05D007391 ORTHO05D009446 1.3e-44 184.9 456 50.2
HPP92_023155 Vanilla planifolia HOM05D007391 ORTHO05D009446 1.3e-44 184.9 459 45.5
SalBow6G6709 Salvia bowleyana HOM05D007391 ORTHO05D009446 3.8e-44 183.3 418 43.8
SalBow6G7005 Salvia bowleyana HOM05D007391 ORTHO05D009446 3.8e-44 183.3 418 43.5
Cpa.g.sc390.6 Carica papaya HOM05D007391 ORTHO05D009446 4.9e-44 183.0 454 46.3
Lalb_Chr14g0373831 Lupinus albus HOM05D007391 ORTHO05D009446 4.9e-44 183.0 451 53.0
Sed0009683 Sechium edule HOM05D007391 ORTHO05D009446 6.4e-44 182.6 452 50.4
Solyc12g042760.1 Solanum lycopersicum HOM05D007391 ORTHO05D009446 1.1e-43 181.8 475 49.1
AUR62011514 Chenopodium quinoa HOM05D007391 ORTHO05D009446 2.1e-42 177.6 443 49.9
COL.COLO4_11942 Corchorus olitorius HOM05D007391 ORTHO05D009446 2.1e-42 177.6 294 51.0
Ah.01g006570 Amaranthus hybridus HOM05D007391 ORTHO05D009446 4.6e-42 176.4 411 53.8
CAN.G12.8 Capsicum annuum HOM05D007391 ORTHO05D009446 4.6e-42 176.4 445 49.9
Lsat_1_v5_gn_1_34341 Lactuca sativa HOM05D007391 ORTHO05D009446 2.3e-41 174.1 431 46.2
Medtr2g103940 Medicago truncatula HOM05D007391 ORTHO05D009446 2.3e-41 174.1 445 44.7
TPR.G37292 Trifolium pratense HOM05D007391 ORTHO05D001615 3.0e-41 173.7 496 47.6
AUR62016333 Chenopodium quinoa HOM05D007391 ORTHO05D001615 5.1e-41 172.9 443 49.7
Sopen12g021940 Solanum pennellii HOM05D007391 ORTHO05D009446 6.7e-41 172.6 453 49.2
FAN09G3908 Fragaria x ananassa HOM05D007391 ORTHO05D009446 3.3e-40 170.2 408 51.5
Nitab4.5_0003157g0010 Nicotiana tabacum HOM05D007391 ORTHO05D009446 9.6e-40 168.7 465 49.7
Sc12g0008730 Simmondsia chinensis HOM05D007391 ORTHO05D009446 9.6e-40 168.7 436 49.1
Ca_01054_v3 Cicer arietinum L. HOM05D000085 ORTHO05D001615 3.7e-39 166.8 367 43.3
Migut.D01079 Erythranthe guttata HOM05D007391 ORTHO05D009446 4.8e-39 166.4 476 46.2
ECA247G3329 Erigeron canadensis HOM05D000038 ORTHO05D003992 8.1e-39 165.6 437 50.1
Nitab4.5_0009497g0020 Nicotiana tabacum HOM05D007391 ORTHO05D009446 8.1e-39 165.6 428 50.9
Psat5g302680 Pisum sativum HOM05D007391 ORTHO05D009446 1.1e-38 165.2 497 40.8
Lj3g0005617 Lotus japonicus HOM05D007391 ORTHO05D009446 1.5e-37 161.4 451 49.4
HanXRQChr02g0033491 Helianthus annuus HOM05D007391 ORTHO05D009446 1.7e-36 157.9 475 46.3
Os01g0623000 Oryza sativa ssp. japonica HOM05D007391 ORTHO05D009446 1.7e-36 157.9 447 48.5
ClCG00G004450 Citrullus lanatus HOM05D007391 ORTHO05D009446 4.9e-36 156.4 429 47.3
ClCG07G012440 Citrullus lanatus HOM05D007391 ORTHO05D009446 4.9e-36 156.4 429 47.3
Actinidia15759 Actinidia chinensis HOM05D007391 ORTHO05D009446 3.2e-35 153.7 191 47.6
Zm00001eb159500 Zea mays HOM05D007391 ORTHO05D009446 7.9e-34 149.1 445 46.5
CDE02G2129 Ceratophyllum demersum HOM05D007391 ORTHO05D009446 2.3e-33 147.5 386 48.7
SHI08938 Sapria himalayana HOM05D007391 ORTHO05D009446 9.0e-30 135.6 420 47.1
ATR0724G054 Amborella trichopoda HOM05D007391 ORTHO05D009446 1.2e-29 135.2 113 57.5
SEGI_31210 Sequoiadendron giganteum HOM05D007391 ORTHO05D009446 1.9e-24 117.9 67 76.1
Hma1.2p1_0355F.1_g133910 Hydrangea macrophylla HOM05D007391 ORTHO05D009446 2.5e-24 117.5 71 76.1
SMO339G0042 Selaginella moellendorffii HOM05D007391 ORTHO05D009446 1.1e-19 102.1 67 71.6
Pp3c3_3780 Physcomitrium patens HOM05D007391 ORTHO05D009446 8.2e-15 85.9 69 63.8
MSTRG.4707 Avicennia marina HOM05D007391 ORTHO05D009446 5.3e-14 83.2 168 51.8
AagrBONN_evm.TU.Sc2ySwM_344.5688 Anthoceros agrestis HOM05D007391 ORTHO05D009446 1.2e-13 82.0 82 48.8
C02p37620 Brassica napus HOM05D043129 ORTHO05D009446 3.9e-09 67.0 180 30.0
BraA02t07376Z Brassica rapa HOM05D007391 ORTHO05D009446 1.1e-06 58.9 83 42.2


User provided reference genes

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