Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J02984 Eucalyptus grandis HOM05D007950 ORTHO05D009951 4.8e-48 194.1 96 100.0
CiPaw.02G150700 Carya illinoinensis HOM05D007950 ORTHO05D009951 2.8e-19 98.6 61 77.0
Nn8g39199 Nelumbo nucifera HOM05D007950 ORTHO05D009951 1.1e-18 96.7 60 76.7
TAR636G2963 Trochodendron aralioides HOM05D007950 ORTHO05D009951 1.1e-18 96.7 60 75.0
Thecc.06G089600 Theobroma cacao HOM05D007950 ORTHO05D009951 2.3e-18 95.5 61 75.4
QL05p023317 Quercus lobata HOM05D007950 ORTHO05D009951 8.9e-18 93.6 60 71.7
GSVIVG01015395001 Vitis vinifera HOM05D007950 ORTHO05D009951 8.9e-18 93.6 60 73.3
FvH4_1g04841 Fragaria vesca HOM05D007950 ORTHO05D009951 3.4e-17 91.7 61 73.8
FAN19G2230 Fragaria x ananassa HOM05D007950 ORTHO05D009951 3.4e-17 91.7 61 73.8
Gohir.A05G130600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 5.8e-17 90.9 61 72.1
Prupe.7G230500 Prunus persica HOM05D007950 ORTHO05D009951 5.8e-17 90.9 59 71.2
Eucgr.C01044 Eucalyptus grandis HOM05D007950 ORTHO05D009951 9.9e-17 90.1 60 75.0
vmacro20696 Vaccinium macrocarpon HOM05D007950 ORTHO05D009951 9.9e-17 90.1 60 70.0
Sc10g0007380 Simmondsia chinensis HOM05D007950 ORTHO05D009951 1.3e-16 89.7 61 65.6
FAN26G3407 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.7e-16 89.4 61 72.1
Gohir.D05G129500 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.7e-16 89.4 61 70.5
Nn2g11757 Nelumbo nucifera HOM05D007950 ORTHO05D009951 1.7e-16 89.4 60 70.0
Potri.001G181701 Populus trichocarpa HOM05D007950 ORTHO05D009951 1.7e-16 89.4 59 69.5
Gohir.A06G062300 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.2e-16 89.0 61 70.5
CSS0015996 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 2.9e-16 88.6 60 66.7
Gohir.D06G060600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.9e-16 88.6 61 68.9
MD15G1186200 Malus domestica HOM05D007950 ORTHO05D009951 4.9e-16 87.8 60 68.3
Actinidia20354 Actinidia chinensis HOM05D007950 ORTHO05D009951 8.3e-16 87.0 61 63.9
CiPaw.04G164400 Carya illinoinensis HOM05D007950 ORTHO05D009951 8.3e-16 87.0 59 69.5
CsaV3_1G030490 Cucumis sativus L. HOM05D007950 ORTHO05D009951 8.3e-16 87.0 60 68.3
Gohir.D03G063400 Gossypium hirsutum HOM05D007950 ORTHO05D009951 8.3e-16 87.0 61 70.5
Gorai.002G059800 Gossypium raimondii HOM05D007950 ORTHO05D009951 8.3e-16 87.0 61 70.5
ClCG06G008510 Citrullus lanatus HOM05D007950 ORTHO05D009951 1.1e-15 86.7 60 68.3
Gorai.010G070600 Gossypium raimondii HOM05D007950 ORTHO05D009951 1.1e-15 86.7 61 67.2
FAN23G0617 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.4e-15 86.3 61 70.5
CiPaw.03G232500 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.9e-15 85.9 61 70.5
MD02G1047700 Malus domestica HOM05D007950 ORTHO05D009951 2.4e-15 85.5 60 68.3
QL02p085472 Quercus lobata HOM05D007950 ORTHO05D009951 2.4e-15 85.5 60 66.7
RcHm_v2.0_Chr2g0090511 Rosa chinensis HOM05D007950 ORTHO05D009951 2.4e-15 85.5 60 66.7
Ciclev10010772m.g Citrus clementina HOM05D007950 ORTHO05D009951 3.2e-15 85.1 60 65.0
Gohir.1Z049586 Gossypium hirsutum HOM05D007950 ORTHO05D009951 3.2e-15 85.1 61 68.9
PGR102G0372 Punica granatum HOM05D007950 ORTHO05D009951 1.6e-14 82.8 61 60.7
Thecc.09G111000 Theobroma cacao HOM05D007950 ORTHO05D009951 1.6e-14 82.8 60 61.7
Manes.16G116501 Manihot esculenta HOM05D007950 ORTHO05D009951 3.5e-14 81.6 60 60.0
CSS0032282 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 6.0e-14 80.9 59 67.8
Manes.11G045700 Manihot esculenta HOM05D007950 ORTHO05D009951 7.8e-14 80.5 61 63.9
Psat7g251240 Pisum sativum HOM05D007950 ORTHO05D009951 1.0e-13 80.1 60 61.7
CSS0048253 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 1.3e-13 79.7 58 67.2
Cc06_g09630 Coffea canephora HOM05D007950 ORTHO05D009951 1.3e-13 79.7 59 66.1
Lj3g0016273 Lotus japonicus HOM05D007950 ORTHO05D009951 1.3e-13 79.7 60 60.0
Medtr4g012610 Medicago truncatula HOM05D007950 ORTHO05D009951 2.3e-13 79.0 58 62.1
ATR0980G014 Amborella trichopoda HOM05D007950 ORTHO05D009951 3.0e-13 78.6 61 59.0
Potri.003G054001 Populus trichocarpa HOM05D007950 ORTHO05D009951 3.0e-13 78.6 58 67.2
arahy.Tifrunner.gnm1.ann1.7G47EE Arachis hypogaea HOM05D007950 ORTHO05D009951 3.9e-13 78.2 60 58.3
arahy.Tifrunner.gnm1.ann1.U6R6BR Arachis hypogaea HOM05D007950 ORTHO05D009951 3.9e-13 78.2 60 58.3
Haze_16407 Corylus avellana HOM05D007950 ORTHO05D009951 8.6e-13 77.0 61 63.9
Haze_16408 Corylus avellana HOM05D007950 ORTHO05D009951 8.6e-13 77.0 61 63.9
Phvul.003G020900 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 1.1e-12 76.6 60 58.3
TPR.G35274 Trifolium pratense HOM05D007950 ORTHO05D009951 2.5e-12 75.5 59 54.2
Glyma.08G206200 Glycine max HOM05D007950 ORTHO05D009951 3.3e-12 75.1 59 59.3
Psat1g042280 Pisum sativum HOM05D007950 ORTHO05D009951 3.3e-12 75.1 60 55.0
SalBow2G2396 Salvia bowleyana HOM05D007950 ORTHO05D009951 3.3e-12 75.1 51 68.6
TPR.G24171 Trifolium pratense HOM05D007950 ORTHO05D009951 3.3e-12 75.1 58 60.3
CDE06G0019 Ceratophyllum demersum HOM05D007950 ORTHO05D009951 7.3e-12 73.9 60 60.0
Medtr4g012580 Medicago truncatula HOM05D007950 ORTHO05D009951 9.6e-12 73.6 58 58.6
FAN05G0591 Fragaria x ananassa HOM05D007950 ORTHO05D009951 3.6e-11 71.6 62 58.1
arahy.Tifrunner.gnm1.ann1.6Z76EK Arachis hypogaea HOM05D007950 ORTHO05D009951 4.7e-11 71.2 62 58.1
Lalb_Chr04g0262731 Lupinus albus HOM05D007950 ORTHO05D009951 4.7e-11 71.2 60 53.3
Sed0000041 Sechium edule HOM05D007950 ORTHO05D009951 4.7e-11 71.2 58 58.6
Glyma.07G005901 Glycine max HOM05D000325 ORTHO05D002025 6.2e-11 70.9 58 58.6
Cc04_g03310 Coffea canephora HOM05D007950 ORTHO05D009951 1.1e-10 70.1 61 60.7
Glyma.09G123700 Glycine max HOM05D007950 ORTHO05D009951 1.1e-10 70.1 57 57.9
FAN14G2438 Fragaria x ananassa HOM05D007950 ORTHO05D009951 2.4e-10 68.9 62 56.5
Medtr6g086645 Medicago truncatula HOM05D007950 ORTHO05D009951 3.1e-10 68.6 60 53.3
Phvul.010G150100 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 5.2e-10 67.8 58 55.2
Migut.D01581 Erythranthe guttata HOM05D007950 ORTHO05D009951 1.5e-09 66.2 62 53.2
Manes.03G020101 Manihot esculenta HOM05D007950 ORTHO05D009951 1.5e-09 66.2 60 53.3
Prupe.3G070100 Prunus persica HOM05D007950 ORTHO05D009951 2.0e-09 65.9 63 58.7
TPR.G8534 Trifolium pratense HOM05D007950 ORTHO05D009951 2.6e-09 65.5 58 53.4
Sc08g0007460 Simmondsia chinensis HOM05D007950 ORTHO05D009951 2.2e-08 62.4 61 55.7
Dinv36624 Davidia involucrata HOM05D007950 ORTHO05D009951 3.8e-08 61.6 64 53.1
Thhalv10012203m.g Eutrema salsugineum HOM05D007950 ORTHO05D009951 8.4e-08 60.5 63 47.6
HanXRQChr09g0275201 Helianthus annuus HOM05D007950 ORTHO05D009951 2.4e-07 58.9 63 49.2


User provided reference genes

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