Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J02937 Eucalyptus grandis HOM05D006741 ORTHO05D008434 4.1e-240 834.3 423 100.0
Cfa003646 Carpinus fangiana HOM05D006741 ORTHO05D008434 8.8e-118 427.9 417 54.7
Haze_15849 Corylus avellana HOM05D006741 ORTHO05D008434 3.7e-116 422.5 417 53.7
PGR102G3207 Punica granatum HOM05D006741 ORTHO05D008434 1.3e-113 414.1 424 55.0
QL05p019947 Quercus lobata HOM05D006741 ORTHO05D008434 9.7e-109 397.9 416 53.4
CiPaw.01G231300 Carya illinoinensis HOM05D006741 ORTHO05D008434 4.8e-108 395.6 416 53.8
CSS0034583 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 2.5e-104 383.3 422 51.9
CSS0005978 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 7.2e-104 381.7 422 51.7
Actinidia09006 Actinidia chinensis HOM05D006741 ORTHO05D008434 1.2e-103 380.9 415 52.3
Manes.11G033400 Manihot esculenta HOM05D006741 ORTHO05D008434 8.0e-103 378.3 418 51.4
Thecc.06G100200 Theobroma cacao HOM05D006741 ORTHO05D008434 6.8e-102 375.2 425 51.1
Duzib235G1269 Durio zibethinus HOM05D006741 ORTHO05D008434 1.7e-100 370.5 424 50.7
Dinv30435 Davidia involucrata HOM05D006741 ORTHO05D008434 3.7e-100 369.4 393 51.7
COL.COLO4_30514 Corchorus olitorius HOM05D006741 ORTHO05D008434 1.2e-98 364.4 428 50.2
TAR636G1866 Trochodendron aralioides HOM05D006741 ORTHO05D008434 3.8e-97 359.4 420 50.0
Actinidia39136 Actinidia chinensis HOM05D006741 ORTHO05D008434 3.3e-96 356.3 415 48.9
Rhsim08G0227700 Rhododendron simsii HOM05D006741 ORTHO05D008434 9.5e-96 354.8 415 48.2
Duzib192G0766 Durio zibethinus HOM05D006741 ORTHO05D008434 6.8e-94 348.6 427 48.5
Cpa.g.sc25.10 Carica papaya HOM05D006741 ORTHO05D008434 8.9e-94 348.2 417 47.2
Atru.chr1.3525 Acer truncatum HOM05D006741 ORTHO05D008434 1.7e-92 344.0 415 48.4
vmacro17014 Vaccinium macrocarpon HOM05D006741 ORTHO05D008434 3.1e-91 339.7 420 46.2
Potri.013G040800 Populus trichocarpa HOM05D006741 ORTHO05D008434 1.2e-90 337.8 417 48.4
Lalb_Chr01g0013161 Lupinus albus HOM05D006741 ORTHO05D008434 4.5e-90 335.9 424 48.8
Sabra05G0046800 Salix brachista HOM05D006741 ORTHO05D008434 2.9e-89 333.2 421 47.0
Potri.005G053300 Populus trichocarpa HOM05D006741 ORTHO05D008434 2.3e-86 323.6 414 46.1
TWI75G1374 Tripterygium wilfordii HOM05D006741 ORTHO05D008434 1.2e-85 321.2 417 45.6
Sabra13G0037700 Salix brachista HOM05D006741 ORTHO05D008434 4.9e-84 315.8 416 45.7
Gohir.A06G189500 Gossypium hirsutum HOM05D006741 ORTHO05D008434 2.0e-82 310.5 424 46.9
Prupe.3G058900 Prunus persica HOM05D006741 ORTHO05D008434 2.7e-82 310.1 411 47.9
arahy.Tifrunner.gnm1.ann1.X4D5DL Arachis hypogaea HOM05D006741 ORTHO05D008434 3.5e-82 309.7 421 45.6
arahy.Tifrunner.gnm1.ann1.CS2PXA Arachis hypogaea HOM05D006741 ORTHO05D008434 4.6e-82 309.3 421 46.1
MD09G1202700 Malus domestica HOM05D006741 ORTHO05D008434 7.8e-82 308.5 418 46.9
Nn6g35322 Nelumbo nucifera HOM05D006741 ORTHO05D008434 7.8e-82 308.5 420 44.0
CANSAT56G2677 Cannabis sativa HOM05D006741 ORTHO05D008434 3.0e-81 306.6 428 44.2
MD17G1183900 Malus domestica HOM05D006741 ORTHO05D008434 2.5e-80 303.5 414 46.6
ClCG07G013320 Citrullus lanatus HOM05D006741 ORTHO05D008434 2.8e-79 300.1 469 42.4
Lj3g0008384 Lotus japonicus HOM05D006741 ORTHO05D008434 4.7e-79 299.3 417 45.3
Gohir.D06G197900 Gossypium hirsutum HOM05D006741 ORTHO05D008434 1.1e-78 298.1 424 45.8
Gorai.010G230700 Gossypium raimondii HOM05D006741 ORTHO05D008434 6.8e-78 295.4 424 45.5
PSO210G4778 Papaver somniferum HOM05D006741 ORTHO05D008434 6.8e-78 295.4 432 46.1
PSO210G6928 Papaver somniferum HOM05D006741 ORTHO05D008434 8.9e-78 295.0 428 45.1
Oeu017120.1 Olea europaea HOM05D006741 ORTHO05D008434 1.5e-77 294.3 418 46.2
MELO3C013001.2 Cucumis melo HOM05D006741 ORTHO05D008434 1.7e-76 290.8 457 41.1
Medtr8g014490 Medicago truncatula HOM05D006741 ORTHO05D008434 1.1e-75 288.1 420 45.2
Sed0020930 Sechium edule HOM05D006741 ORTHO05D008434 1.4e-75 287.7 441 42.0
CsaV3_3G023590 Cucumis sativus L. HOM05D006741 ORTHO05D008434 6.0e-74 282.3 457 41.1
Ca_23263_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 2.5e-72 276.9 420 45.0
Ca_23272_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 2.5e-72 276.9 420 45.0
ClCG00G003340 Citrullus lanatus HOM05D006741 ORTHO05D008434 3.6e-71 273.1 447 40.9
TPR.G26946 Trifolium pratense HOM05D006741 ORTHO05D008434 1.1e-70 271.6 463 40.2
DCAR_023081 Daucus carota HOM05D006741 ORTHO05D008434 1.4e-70 271.2 427 42.4
Psat4g197400 Pisum sativum HOM05D006741 ORTHO05D008434 4.4e-69 266.2 416 43.0
MBI01_g10133_MAGBIO Magnolia biondii HOM05D006741 ORTHO05D008434 8.3e-68 261.9 437 40.3
Cc04_g02540 Coffea canephora HOM05D006741 ORTHO05D008434 1.4e-67 261.2 412 40.8
Glyma.08G200900 Glycine max HOM05D006741 ORTHO05D008434 7.1e-67 258.8 420 41.9
Sc12g0010170 Simmondsia chinensis HOM05D006741 ORTHO05D008434 9.2e-67 258.5 443 40.2
MSTRG.11026 Avicennia marina HOM05D006741 ORTHO05D008434 1.0e-65 255.0 418 40.0
Aqoxy7G03978 Aquilegia oxysepala HOM05D006741 ORTHO05D008434 1.1e-64 251.5 425 39.5
Nitab4.5_0001172g0120 Nicotiana tabacum HOM05D006741 ORTHO05D008434 2.5e-64 250.4 453 39.5
VMungo0331G0583 Vigna mungo HOM05D006741 ORTHO05D008434 2.5e-64 250.4 414 42.3
Nn8g39070 Nelumbo nucifera HOM05D006741 ORTHO05D008434 5.6e-64 249.2 355 40.3
Ciclev10027417m.g Citrus clementina HOM05D006741 ORTHO05D008434 9.5e-64 248.4 416 38.9
Solyc12g044620.2 Solanum lycopersicum HOM05D006741 ORTHO05D008434 3.6e-63 246.5 475 38.1
Phvul.010G145200 Phaseolus vulgaris HOM05D006741 ORTHO05D008434 6.2e-63 245.7 415 41.4
PGSC0003DMG400026441 Solanum tuberosum HOM05D006741 ORTHO05D008434 1.2e-61 241.5 473 38.9
Lj9A513G60 Lonicera japonica HOM05D006741 ORTHO05D008434 1.5e-61 241.1 364 43.1
GSVIVG01016979001 Vitis vinifera HOM05D006741 ORTHO05D008434 2.6e-61 240.4 425 37.2
Sopen12g023080 Solanum pennellii HOM05D006741 ORTHO05D008434 2.9e-60 236.9 475 37.9
Migut.I00896 Erythranthe guttata HOM05D006741 ORTHO05D008434 3.8e-60 236.5 415 39.5
RcHm_v2.0_Chr2g0140551 Rosa chinensis HOM05D006741 ORTHO05D008434 3.8e-60 236.5 410 41.7
Hund28870 Selenicereus undatus HOM05D006741 ORTHO05D008434 4.2e-59 233.0 419 38.7
THA.LOC104806335 Tarenaya hassleriana HOM05D006741 ORTHO05D008434 4.2e-59 233.0 412 37.4
Peaxi162Scf00177g00125 Petunia axillaris HOM05D006741 ORTHO05D008434 9.2e-59 231.9 443 39.1
Glyma.07G015400 Glycine max HOM05D006741 ORTHO05D008434 2.1e-58 230.7 422 38.6
Hund28829 Selenicereus undatus HOM05D006741 ORTHO05D008434 1.0e-57 228.4 410 37.6
SGA_v2.0_scaffold69G23318 Striga asiatica HOM05D006741 ORTHO05D008434 6.6e-57 225.7 417 39.8
Nitab4.5_0004241g0050 Nicotiana tabacum HOM05D006741 ORTHO05D008434 6.2e-55 219.2 450 36.7
AT4G12540 Arabidopsis thaliana HOM05D006741 ORTHO05D008434 8.1e-55 218.8 417 37.9
FvH4_6g32410 Fragaria vesca HOM05D006741 ORTHO05D008434 8.1e-55 218.8 412 39.1
FAN14G5382 Fragaria x ananassa HOM05D006741 ORTHO05D008434 2.0e-53 214.2 412 38.6
Carub.0006s3171 Capsella rubella HOM05D006741 ORTHO05D008434 2.6e-53 213.8 418 35.6
FAN02G4526 Fragaria x ananassa HOM05D006741 ORTHO05D008434 2.9e-52 210.3 410 40.2
FAN05G1069 Fragaria x ananassa HOM05D006741 ORTHO05D008434 6.4e-52 209.1 412 38.6
AUR62031924 Chenopodium quinoa HOM05D006741 ORTHO05D008434 1.9e-51 207.6 426 35.4
Thhalv10028639m.g Eutrema salsugineum HOM05D006741 ORTHO05D008434 4.2e-51 206.5 422 36.0
AL6G47480 Arabidopsis lyrata HOM05D006741 ORTHO05D008434 1.6e-50 204.5 418 34.7
Aa31LG9G10130 Aethionema arabicum HOM05D006741 ORTHO05D008434 1.1e-48 198.4 423 35.9
EL10Ac3g05317 Beta vulgaris HOM05D006741 ORTHO05D008434 1.9e-48 197.6 413 35.6
HanXRQChr09g0276261 Helianthus annuus HOM05D006741 ORTHO05D008434 1.9e-48 197.6 419 33.9
Sp6g04980 Schrenkiella parvula HOM05D006741 ORTHO05D008434 2.1e-47 194.1 422 34.6
SpUn0055_0020 Schrenkiella parvula HOM05D006741 ORTHO05D008434 2.1e-47 194.1 422 34.6
Ah.01g005790 Amaranthus hybridus HOM05D006741 ORTHO05D008434 2.4e-46 190.7 417 34.3
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 5.8e-45 186.0 393 36.9
Hma1.2p1_0430F.1_g151390 Hydrangea macrophylla HOM05D006741 ORTHO05D008434 5.8e-45 186.0 420 33.8
Dinv37976 Davidia involucrata HOM05D006741 ORTHO05D008434 1.7e-44 184.5 249 45.0
CARHR253650 Cardamine hirsuta HOM05D006741 ORTHO05D008434 3.8e-44 183.3 421 33.7
A09p26830 Brassica napus HOM05D006741 ORTHO05D008434 1.4e-43 181.4 414 35.3
ECA232G4726 Erigeron canadensis HOM05D006741 ORTHO05D008434 1.6e-42 177.9 413 32.7
Lsat_1_v5_gn_4_97420 Lactuca sativa HOM05D006741 ORTHO05D008434 2.1e-42 177.6 428 31.5
BraA09t38254Z Brassica rapa HOM05D006741 ORTHO05D008434 2.3e-41 174.1 427 34.0
BcaC04g21238 Brassica carinata HOM05D006741 ORTHO05D008434 8.7e-41 172.2 419 34.1
C09p34000 Brassica napus HOM05D006741 ORTHO05D008434 8.7e-41 172.2 419 34.1
BolC9t56238H Brassica oleracea HOM05D006741 ORTHO05D008434 8.7e-41 172.2 419 34.1
Cpa.g.sc25.28 Carica papaya HOM05D006741 ORTHO05D008434 8.1e-39 165.6 281 37.7
CDE02G1085 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 2.2e-36 157.5 422 30.1
TAR624G0518 Trochodendron aralioides HOM05D006741 ORTHO05D008434 1.9e-35 154.5 260 37.3
Os05g0532500 Oryza sativa ssp. japonica HOM05D006741 ORTHO05D008434 3.7e-31 140.2 451 26.6
ATR0705G093 Amborella trichopoda HOM05D006741 ORTHO05D008434 1.1e-24 118.6 330 30.3
Zm00001eb353790 Zea mays HOM05D006741 ORTHO05D008434 3.7e-23 113.6 350 30.3
CDE04G0136 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 4.2e-19 100.1 224 31.7
unitig_748.g7440 Utricularia gibba HOM05D006741 ORTHO05D008434 3.1e-14 84.0 164 34.8
unitig_748.g7441 Utricularia gibba HOM05D006741 ORTHO05D008434 7.9e-10 69.3 123 35.8
Actinidia32099 Actinidia chinensis HOM05D006741 ORTHO05D008434 1.0e-09 68.9 150 36.0


User provided reference genes

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