Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J02700 Eucalyptus grandis HOM05D000445 ORTHO05D000314 2.6e-39 164.9 78 100.0
HanXRQChr00c0165g0572211 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQChr00c0349g0573991 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQChr00c0394g0574511 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQChr00c0434g0574681 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQChr04g0127431 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQChr05g0152501 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQChr10g0284471 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQChr15g0474951 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 1.3e-38 162.5 76 100.0
HanXRQChr11g0336101 Helianthus annuus HOM05D000445 ORTHO05D000314 6.3e-38 160.2 76 98.7
HanXRQChr11g0336121 Helianthus annuus HOM05D000445 ORTHO05D000314 6.3e-38 160.2 76 98.7
Hma1.2p1_0192F.1_g083680 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 6.3e-38 160.2 76 97.4
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 6.3e-38 160.2 76 97.4
Hma1.2p1_4210F.1_g338452 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 6.3e-38 160.2 76 97.4
Lsat_1_v5_gn_0_15540 Lactuca sativa HOM05D000445 ORTHO05D000314 6.3e-38 160.2 76 98.7
Lsat_1_v5_gn_3_105620 Lactuca sativa HOM05D000445 ORTHO05D000314 6.3e-38 160.2 76 98.7
Lsat_1_v5_gn_3_13441 Lactuca sativa HOM05D000445 ORTHO05D000314 6.3e-38 160.2 76 98.7
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 6.3e-38 160.2 76 98.7
Lsat_1_v5_gn_9_18701 Lactuca sativa HOM05D000445 ORTHO05D000314 6.3e-38 160.2 76 98.7
Lsat_1_v5_gn_9_42020 Lactuca sativa HOM05D000445 ORTHO05D000314 6.3e-38 160.2 76 98.7
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 1.4e-37 159.1 76 97.4
Nn070s42380 Nelumbo nucifera HOM05D000445 ORTHO05D000314 4.1e-37 157.5 76 97.4
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 5.3e-37 157.1 76 96.1
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 7.0e-37 156.8 76 96.1
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 7.0e-37 156.8 76 96.1
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 9.1e-37 156.4 76 96.1
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 9.1e-37 156.4 76 96.1
Nn020s41480 Nelumbo nucifera HOM05D000445 ORTHO05D000314 2.0e-36 155.2 76 96.1
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 3.5e-36 154.5 76 94.7
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 3.5e-36 154.5 76 94.7
Oeu012817.1 Olea europaea HOM05D000445 ORTHO05D000314 7.7e-36 153.3 75 94.7
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 1.7e-35 152.1 76 94.7
Lalb_Chr07g0191931 Lupinus albus HOM05D000445 ORTHO05D000314 1.7e-35 152.1 76 92.1
PGSC0003DMG400015060 Solanum tuberosum HOM05D000445 ORTHO05D000314 5.0e-35 150.6 76 94.7
Aqoxy169s001 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 6.5e-35 150.2 76 92.1
Nn2g12581 Nelumbo nucifera HOM05D000806 ORTHO05D002320 8.5e-35 149.8 76 93.4
Sc05g0004090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 1.1e-34 149.4 76 93.4
Sc25g0001980 Simmondsia chinensis HOM05D000445 ORTHO05D000314 1.1e-34 149.4 76 93.4
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 1.5e-34 149.1 76 92.1
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 1.5e-34 149.1 76 92.1
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 1.9e-34 148.7 75 93.3
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 2.5e-34 148.3 76 89.5
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 2.5e-34 148.3 76 89.5
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 2.5e-34 148.3 74 93.2
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.5e-34 148.3 75 94.7
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.5e-34 148.3 75 94.7
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.5e-34 148.3 75 94.7
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.5e-34 148.3 75 94.7
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.5e-34 148.3 75 94.7
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.5e-34 148.3 75 94.7
Gohir.A12G088950 Gossypium hirsutum HOM05D000445 ORTHO05D000314 3.2e-34 147.9 74 93.2
Gohir.D01G101865 Gossypium hirsutum HOM05D000445 ORTHO05D000314 3.2e-34 147.9 76 92.1
arahy.Tifrunner.gnm1.ann1.QI67VD Arachis hypogaea HOM05D000445 ORTHO05D000314 7.2e-34 146.7 76 88.2
CAN.G413.6 Capsicum annuum HOM05D000445 ORTHO05D000314 7.2e-34 146.7 76 90.8
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 7.2e-34 146.7 76 92.1
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 7.2e-34 146.7 76 92.1
Nitab4.5_0000223g0170 Nicotiana tabacum HOM05D000445 ORTHO05D000314 7.2e-34 146.7 76 89.5
arahy.Tifrunner.gnm1.ann1.R6YYA0 Arachis hypogaea HOM05D000445 ORTHO05D000314 9.4e-34 146.4 76 89.5
Solyc00g500148.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.1e-33 145.2 75 93.3
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 3.6e-33 144.4 76 89.5
Lj4g0020232 Lotus japonicus HOM05D000445 ORTHO05D000314 8.0e-33 143.3 75 89.3
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 1.0e-32 142.9 76 90.8
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 3.0e-32 141.4 73 87.7
VMungo0976G0001 Vigna mungo HOM05D000445 ORTHO05D000314 3.0e-32 141.4 73 87.7
Lsat_1_v5_gn_7_67161 Lactuca sativa HOM05D000445 ORTHO05D000314 4.0e-32 141.0 76 88.2
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 5.2e-32 140.6 75 88.0
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 5.2e-32 140.6 75 88.0
Lalb_Chr01g0014991 Lupinus albus HOM05D000445 ORTHO05D000314 3.4e-31 137.9 69 92.8
EL10As18g24166 Beta vulgaris HOM05D000445 ORTHO05D000314 4.4e-31 137.5 76 86.8
Solyc10g018980.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 5.7e-31 137.1 74 87.8
Peaxi162Scf00211g00218 Petunia axillaris HOM05D000445 ORTHO05D000314 1.7e-30 135.6 75 89.3
EL10Ac1g00652 Beta vulgaris HOM05D000445 ORTHO05D000314 6.3e-30 133.7 76 85.5
ATCG00860 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 1.1e-29 132.9 76 85.5
ATCG01280 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 1.1e-29 132.9 76 85.5
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 1.1e-29 132.9 76 85.5
HanXRQChr00c0585g0576241 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-29 132.1 61 100.0
TPR.G25940 Trifolium pratense HOM05D000445 ORTHO05D000314 2.4e-29 131.7 76 82.9
Oeu058356.1 Olea europaea HOM05D000445 ORTHO05D000314 7.0e-29 130.2 70 87.1
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 1.6e-28 129.0 76 82.9
BolSC29t60491H Brassica oleracea HOM05D000445 ORTHO05D000314 1.6e-28 129.0 76 82.9
BolSC49t61128H Brassica oleracea HOM05D000445 ORTHO05D000314 1.6e-28 129.0 76 82.9
BraSC103t45415Z Brassica rapa HOM05D000445 ORTHO05D000314 1.6e-28 129.0 76 82.9
BraSC103t45439Z Brassica rapa HOM05D000445 ORTHO05D000314 1.6e-28 129.0 76 82.9
BraSC143t45643Z Brassica rapa HOM05D000445 ORTHO05D000314 1.6e-28 129.0 76 82.9
BraSC25t45893Z Brassica rapa HOM05D000445 ORTHO05D000314 1.6e-28 129.0 76 82.9
Solyc04g024540.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.7e-28 128.3 73 83.6
FAN08G3077 Fragaria x ananassa HOM05D000445 ORTHO05D000314 5.9e-28 127.1 65 90.8
EL10Ac8g19269 Beta vulgaris HOM05D000445 ORTHO05D000314 1.0e-27 126.3 73 79.5
Hund08796 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-27 125.9 77 84.4
Hund10280 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-27 125.9 77 84.4
Hund28591 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-27 125.9 77 84.4
Hund28646 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-27 125.9 77 84.4
Hund28772 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-27 125.9 77 84.4
Hund29402 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-27 125.9 77 84.4
Hund29423 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-27 125.9 77 84.4
HanXRQChr11g0326541 Helianthus annuus HOM05D000445 ORTHO05D000314 3.8e-27 124.4 61 93.4
arahy.Tifrunner.gnm1.ann1.BS87Z8 Arachis hypogaea HOM05D000445 ORTHO05D000314 8.5e-27 123.2 69 84.1
Lsat_1_v5_gn_7_82600 Lactuca sativa HOM05D000445 ORTHO05D000314 7.2e-26 120.2 61 91.8
Ah.10g027230 Amaranthus hybridus HOM05D000445 ORTHO05D000314 9.4e-26 119.8 77 81.8
Ah.10g027290 Amaranthus hybridus HOM05D000445 ORTHO05D000314 9.4e-26 119.8 77 81.8
Ah.10g027420 Amaranthus hybridus HOM05D000445 ORTHO05D000314 9.4e-26 119.8 77 81.8
Ah.10g027670 Amaranthus hybridus HOM05D000445 ORTHO05D000314 9.4e-26 119.8 77 81.8
Ah.10g027730 Amaranthus hybridus HOM05D000445 ORTHO05D000314 9.4e-26 119.8 77 81.8
BraSC179t45786Z Brassica rapa HOM05D000445 ORTHO05D000314 4.7e-25 117.5 76 76.3
Ah.10g029020 Amaranthus hybridus HOM05D000445 ORTHO05D000314 2.3e-24 115.2 76 80.3
HanXRQChr13g0418951 Helianthus annuus HOM05D000445 ORTHO05D000314 3.0e-24 114.8 54 100.0
Solyc08g045620.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 3.0e-24 114.8 62 88.7
HanXRQChr00c0533g0575561 Helianthus annuus HOM05D000445 ORTHO05D000314 4.0e-24 114.4 61 86.9
Nitab4.5_0003101g0130 Nicotiana tabacum HOM05D000445 ORTHO05D000314 4.0e-24 114.4 62 87.1
HanXRQChr00c0392g0574461 Helianthus annuus HOM05D000445 ORTHO05D000314 5.2e-24 114.0 76 76.3
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 4.4e-23 110.9 76 75.0
Gorai.002G166000 Gossypium raimondii HOM05D000445 ORTHO05D000314 2.8e-22 108.2 57 84.2
BraSC59t46524Z Brassica rapa HOM05D000445 ORTHO05D000314 8.3e-22 106.7 65 81.5
Gohir.D10G110850 Gossypium hirsutum HOM05D000445 ORTHO05D000314 1.4e-21 105.9 61 82.0
arahy.Tifrunner.gnm1.ann1.9A3TMW Arachis hypogaea HOM05D000445 ORTHO05D000314 9.1e-21 103.2 54 88.9
Nitab4.5_0002093g0210 Nicotiana tabacum HOM05D000445 ORTHO05D000314 7.7e-20 100.1 54 88.9
Gorai.011G122200 Gossypium raimondii HOM05D000445 ORTHO05D000314 1.0e-19 99.8 65 73.8
FAN18G1965 Fragaria x ananassa HOM05D000445 ORTHO05D000314 2.3e-19 98.6 54 85.2
Migut.M00451 Erythranthe guttata HOM05D000445 ORTHO05D000314 5.0e-19 97.4 54 88.9
Solyc09g031840.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.6e-19 97.1 53 90.6
CiPaw.03G000800 Carya illinoinensis HOM05D000445 ORTHO05D000314 1.5e-18 95.9 62 74.2
Gohir.D02G149651 Gossypium hirsutum HOM05D000445 ORTHO05D000314 1.5e-18 95.9 54 85.2
Oeu022561.1 Olea europaea HOM05D000445 ORTHO05D000314 1.5e-18 95.9 55 81.8
Thhalv10001808m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 2.5e-18 95.1 56 83.9
Lalb_Chr13g0292601 Lupinus albus HOM05D000445 ORTHO05D000314 3.3e-18 94.7 49 89.8
HanXRQChr00c0448g0574801 Helianthus annuus HOM05D000445 ORTHO05D000314 7.2e-18 93.6 55 87.3
Lalb_Chr12g0206591 Lupinus albus HOM05D000445 ORTHO05D000314 9.5e-18 93.2 68 67.6
Solyc05g047670.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.2e-17 92.8 50 88.0
BraSC138t45546Z Brassica rapa HOM05D000445 ORTHO05D000314 2.1e-17 92.0 54 83.3
Solyc04g050840.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.7e-17 90.9 53 84.9
Solyc01g017110.2 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.1e-17 90.5 48 85.4
Peaxi162Scf00005g04915 Petunia axillaris HOM05D000729 ORTHO05D001063 1.0e-16 89.7 43 95.3
Gorai.005G167600 Gossypium raimondii HOM05D000445 ORTHO05D000314 2.3e-16 88.6 54 81.5
Hund11510 Selenicereus undatus HOM05D000445 ORTHO05D000314 6.8e-16 87.0 56 82.1
Hund19326 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.2e-15 86.3 55 83.6
Hund26852 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.2e-15 86.3 55 83.6
Migut.D01405 Erythranthe guttata HOM05D000445 ORTHO05D000314 3.5e-12 74.7 40 87.5
Peaxi162Scf00134g01413 Petunia axillaris HOM05D011550 ORTHO05D015717 3.5e-12 74.7 37 91.9
Eucgr.G01321 Eucalyptus grandis HOM05D000445 ORTHO05D000314 5.9e-12 73.9 34 97.1
Migut.D01323 Erythranthe guttata HOM05D000445 ORTHO05D000314 4.3e-10 67.8 75 50.7
HanXRQChr00c0925g0577921 Helianthus annuus HOM05D000445 ORTHO05D000314 1.6e-09 65.9 53 62.3
RcHm_v2.0_Chr2g0118441 Rosa chinensis HOM05D000445 ORTHO05D000314 1.0e-08 63.2 46 69.6
Nitab4.5_0004573g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 4.0e-08 61.2 34 82.4
Gorai.007G214200 Gossypium raimondii HOM05D000445 ORTHO05D000314 8.9e-08 60.1 28 96.4
Nitab4.5_0004573g0040 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.2e-07 59.7 34 82.4
Migut.D01372 Erythranthe guttata HOM05D000445 ORTHO05D000314 1.5e-07 59.3 27 96.3
EL10As3g23367 Beta vulgaris HOM05D000445 ORTHO05D000314 3.7e-06 54.7 34 76.5


User provided reference genes

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