Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 3.5e-58 228.4 146 100.0
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 9.1e-30 134.0 143 64.3
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 9.1e-30 134.0 144 52.8
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.5e-29 133.3 143 60.8
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 2.0e-29 132.9 144 54.2
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 2.0e-29 132.9 144 54.2
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 2.6e-29 132.5 143 60.8
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 4.5e-29 131.7 143 60.1
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 1.0e-28 130.6 144 52.1
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 1.7e-28 129.8 144 53.5
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 3.8e-28 128.6 143 67.1
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 8.5e-28 127.5 143 53.1
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.1e-27 127.1 146 58.9
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 1.1e-27 127.1 143 50.3
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 1.4e-27 126.7 143 58.0
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 2.5e-27 125.9 143 59.4
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 1.0e-25 120.6 144 52.1
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 3.0e-25 119.0 143 51.0
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 3.0e-25 119.0 143 58.7
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 3.0e-25 119.0 143 60.1
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 6.7e-25 117.9 144 47.2
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 6.7e-25 117.9 144 47.2
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 8.8e-25 117.5 142 49.3
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 1.1e-24 117.1 143 51.0
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 1.1e-24 117.1 146 62.3
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 2.0e-24 116.3 145 50.3
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 2.6e-24 115.9 144 46.5
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 2.6e-24 115.9 143 48.3
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 3.3e-24 115.5 138 64.5
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 4.4e-24 115.2 144 53.5
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 9.7e-24 114.0 144 56.9
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 1.3e-23 113.6 143 56.6
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 1.3e-23 113.6 142 50.7
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 1.7e-23 113.2 144 60.4
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 2.2e-23 112.8 144 45.8
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 2.2e-23 112.8 143 46.9
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 3.7e-23 112.1 144 49.3
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 6.3e-23 111.3 144 49.3
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 8.2e-23 110.9 143 51.0
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 8.2e-23 110.9 143 56.6
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 1.1e-22 110.5 143 49.0
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 9.1e-22 107.5 146 60.3
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.2e-21 107.1 144 48.6
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 1.2e-21 107.1 144 50.7
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 1.2e-21 107.1 145 44.8
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.5e-21 106.7 144 55.6
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 1.5e-21 106.7 144 55.6
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 2.0e-21 106.3 143 51.7
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 2.6e-21 105.9 140 55.0
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 5.9e-21 104.8 145 44.1
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 7.7e-21 104.4 135 55.6
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 7.7e-21 104.4 141 48.9
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 2.2e-20 102.8 102 73.5
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 5.0e-20 101.7 142 45.1
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 5.0e-20 101.7 143 49.0
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 5.0e-20 101.7 142 44.4
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 6.5e-20 101.3 95 58.9
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 6.5e-20 101.3 144 43.1
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 8.5e-20 100.9 146 41.8
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 8.5e-20 100.9 143 46.2
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 1.1e-19 100.5 134 44.8
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 1.1e-19 100.5 143 46.2
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 1.4e-19 100.1 144 49.3
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 1.4e-19 100.1 95 83.2
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 1.9e-19 99.8 143 46.2
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 2.5e-19 99.4 130 48.5
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 5.5e-19 98.2 141 57.4
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 5.5e-19 98.2 141 59.6
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 2.7e-18 95.9 128 60.9
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 2.7e-18 95.9 143 44.8
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 2.7e-18 95.9 103 55.3
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 1.0e-17 94.0 97 55.7
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 1.0e-17 94.0 139 43.9
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 1.4e-17 93.6 143 54.5
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 2.3e-17 92.8 131 47.3
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 2.3e-17 92.8 144 44.4
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 6.7e-17 91.3 143 46.9
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 5.7e-16 88.2 119 58.0
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 1.7e-15 86.7 143 44.1
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 2.8e-15 85.9 143 44.8
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 2.8e-15 85.9 129 45.7
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 1.8e-14 83.2 143 42.7
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 3.1e-14 82.4 143 42.0
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 9.1e-14 80.9 144 39.6
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 1.2e-13 80.5 144 49.3
Sc03g0004180 Simmondsia chinensis HOM05D006398 ORTHO05D007983 1.6e-13 80.1 143 51.7
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 4.5e-13 78.6 143 38.5
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 5.9e-13 78.2 85 55.3
Lalb_Chr05g0215011 Lupinus albus HOM05D006398 ORTHO05D007983 7.7e-13 77.8 144 52.1
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 4.2e-11 72.0 143 36.4
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 8.0e-10 67.8 150 38.0
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 1.0e-09 67.4 67 50.7
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 1.0e-09 67.4 147 36.7
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 1.4e-09 67.0 91 62.6
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 1.8e-09 66.6 147 35.4
Cpa.g.sc178.36 Carica papaya HOM05D006398 ORTHO05D007983 2.3e-09 66.2 104 39.4
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 4.0e-09 65.5 142 37.3
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 2.6e-08 62.8 141 48.9
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 4.4e-08 62.0 131 34.4
unitig_8.g4055 Utricularia gibba HOM05D006398 ORTHO05D007983 4.4e-08 62.0 138 49.3
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 5.7e-08 61.6 89 60.7
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 7.5e-08 61.2 143 32.9
THA.LOC109117268 Tarenaya hassleriana HOM05D006398 ORTHO05D007983 9.7e-08 60.8 148 50.7
arahy.Tifrunner.gnm1.ann1.GQ5KDA Arachis hypogaea HOM05D006398 ORTHO05D007983 1.3e-07 60.5 44 70.5
Carub.0005s1788 Capsella rubella HOM05D006398 ORTHO05D007983 3.7e-07 58.9 141 46.8
Sp5g10740 Schrenkiella parvula HOM05D006398 ORTHO05D007983 6.3e-07 58.2 89 61.8
SHI11157 Sapria himalayana HOM05D006398 ORTHO05D007983 3.1e-06 55.8 103 39.8
Aa31LG4G7260 Aethionema arabicum HOM05D000087 ORTHO05D002585 9.1e-06 54.3 142 41.5
AUR62039711 Chenopodium quinoa HOM05D006398 ORTHO05D007983 9.1e-06 54.3 144 43.8


User provided reference genes

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