Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 1.5e-66 256.1 134 100.0
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 2.8e-54 215.3 134 82.8
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 8.3e-54 213.8 134 81.3
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 1.2e-52 209.9 134 80.6
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 2.0e-52 209.1 134 82.1
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 5.9e-52 207.6 134 79.1
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 1.7e-51 206.1 134 77.6
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 1.7e-51 206.1 134 81.3
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 1.1e-50 203.4 134 75.4
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 1.5e-50 203.0 128 81.2
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 1.9e-50 202.6 134 78.4
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 4.2e-50 201.4 134 79.9
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 7.2e-50 200.7 134 79.9
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 7.2e-50 200.7 134 78.4
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 7.2e-50 200.7 134 79.9
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 1.2e-49 199.9 133 78.9
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 1.6e-49 199.5 134 79.9
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 3.6e-49 198.4 134 77.6
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 4.7e-49 198.0 134 78.4
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 6.1e-49 197.6 134 76.1
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 8.0e-49 197.2 134 77.6
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 8.0e-49 197.2 129 78.3
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 1.0e-48 196.8 134 77.6
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 1.4e-48 196.4 134 75.4
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 2.3e-48 195.7 134 78.4
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 3.0e-48 195.3 134 77.6
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 4.0e-48 194.9 134 77.6
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 4.0e-48 194.9 134 76.9
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 4.0e-48 194.9 134 78.4
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 5.2e-48 194.5 134 73.9
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 6.8e-48 194.1 134 74.6
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 6.8e-48 194.1 134 73.9
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 8.8e-48 193.7 134 75.4
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 1.2e-47 193.4 134 78.4
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.5e-47 193.0 134 76.9
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 2.0e-47 192.6 134 75.4
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 2.0e-47 192.6 134 73.1
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 3.4e-47 191.8 134 77.6
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 4.4e-47 191.4 134 73.9
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 7.5e-47 190.7 134 71.6
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 1.3e-46 189.9 134 76.9
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 1.3e-46 189.9 134 73.1
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 1.7e-46 189.5 134 73.9
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 2.2e-46 189.1 134 75.4
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 2.2e-46 189.1 134 75.4
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.8e-46 188.7 138 74.6
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.8e-46 188.7 138 74.6
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 2.8e-46 188.7 134 76.1
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 3.7e-46 188.3 138 74.6
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.7e-46 188.3 138 74.6
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.7e-46 188.3 138 74.6
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.7e-46 188.3 138 74.6
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 6.3e-46 187.6 129 74.4
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 8.3e-46 187.2 138 73.9
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 1.8e-45 186.0 134 76.9
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 1.8e-45 186.0 134 72.4
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 2.4e-45 185.7 134 74.6
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 2.4e-45 185.7 134 73.9
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 4.1e-45 184.9 134 74.6
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 5.4e-45 184.5 134 73.9
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 7.0e-45 184.1 134 71.6
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 9.1e-45 183.7 134 73.9
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 1.6e-44 183.0 135 71.1
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 2.0e-44 182.6 134 71.6
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 2.0e-44 182.6 135 71.1
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 3.5e-44 181.8 136 73.5
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.5e-44 181.8 138 73.2
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 4.5e-44 181.4 134 72.4
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 4.5e-44 181.4 134 70.1
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 4.5e-44 181.4 138 73.9
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.5e-44 181.4 138 73.9
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 5.9e-44 181.0 134 71.6
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 5.9e-44 181.0 134 71.6
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 5.9e-44 181.0 134 72.4
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 1.0e-43 180.3 134 67.2
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 1.3e-43 179.9 125 74.4
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 1.3e-43 179.9 134 69.4
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 1.3e-43 179.9 134 75.4
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.7e-43 179.5 138 72.5
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 2.3e-43 179.1 134 68.7
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 3.8e-43 178.3 137 73.0
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 6.6e-43 177.6 134 70.9
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 1.1e-42 176.8 129 73.6
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 1.5e-42 176.4 135 71.1
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.9e-42 176.0 134 70.1
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 1.9e-42 176.0 121 74.4
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 2.5e-42 175.6 113 78.8
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 4.2e-42 174.9 128 72.7
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 5.6e-42 174.5 108 84.3
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 7.2e-42 174.1 134 69.4
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 1.6e-41 172.9 121 76.0
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 3.6e-41 171.8 134 64.9
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 1.4e-40 169.9 121 75.2
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 1.8e-40 169.5 113 76.1
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 2.3e-40 169.1 133 67.7
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 3.0e-40 168.7 136 66.9
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 5.2e-40 167.9 128 68.8
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 6.8e-40 167.5 134 67.9
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 1.5e-39 166.4 123 69.9
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 2.0e-39 166.0 134 66.4
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.0e-39 166.0 134 68.7
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 2.6e-39 165.6 138 66.7
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 4.4e-39 164.9 113 77.0
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 4.4e-39 164.9 113 77.0
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 4.4e-39 164.9 113 77.0
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 4.4e-39 164.9 113 77.0
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 4.4e-39 164.9 119 72.3
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 2.9e-38 162.2 107 79.4
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 4.1e-37 158.3 134 64.2
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 7.0e-37 157.5 132 64.4
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 1.6e-36 156.4 113 71.7
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 5.9e-36 154.5 134 63.4
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 7.8e-36 154.1 134 67.2
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 2.9e-35 152.1 127 66.1
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 1.9e-34 149.4 92 80.4
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 2.5e-34 149.1 133 61.7
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 9.5e-34 147.1 134 59.7
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 1.2e-33 146.7 118 68.6
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 2.1e-33 146.0 115 69.6
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.8e-33 145.6 126 64.3
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 6.2e-33 144.4 116 68.1
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 8.0e-33 144.1 100 74.0
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 5.2e-32 141.4 134 61.2
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 5.8e-31 137.9 120 65.8
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 4.9e-30 134.8 93 76.3
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 6.0e-28 127.9 124 57.3
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 5.2e-24 114.8 93 66.7
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 4.1e-21 105.1 83 60.2
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 9.2e-21 104.0 57 84.2
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 2.3e-19 99.4 129 42.6
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 1.9e-18 96.3 91 51.6
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 3.3e-18 95.5 111 45.9
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 2.1e-17 92.8 110 47.3
Dinv24762 Davidia involucrata HOM05D003270 ORTHO05D003662 4.0e-16 88.6 116 49.1
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 4.1e-13 78.6 76 57.9
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 3.0e-11 72.4 62 61.3
Actinidia36173 Actinidia chinensis HOM05D005499 ORTHO05D006666 8.6e-11 70.9 82 54.9
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 5.6e-10 68.2 99 39.4
CDE04G0501 Ceratophyllum demersum HOM05D002849 ORTHO05D009472 1.4e-08 63.5 68 55.9
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 2.4e-08 62.8 125 33.6
Dinv25304 Davidia involucrata HOM05D000009 ORTHO05D000008 5.2e-08 61.6 54 64.8


User provided reference genes

Program Settings