Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J02264 Eucalyptus grandis HOM05D006554 ORTHO05D008778 4.7e-211 737.6 382 100.0
Dinv33413 Davidia involucrata HOM05D006554 ORTHO05D008778 1.3e-56 224.6 361 39.9
GSVIVG01032362001 Vitis vinifera HOM05D006554 ORTHO05D008778 3.6e-54 216.5 365 42.7
TAR629G0722 Trochodendron aralioides HOM05D006554 ORTHO05D008778 1.4e-53 214.5 383 40.7
Prupe.3G295900 Prunus persica HOM05D006554 ORTHO05D008778 1.4e-45 188.0 365 37.8
Peaxi162Scf00080g01410 Petunia axillaris HOM05D006554 ORTHO05D008778 2.4e-45 187.2 359 37.6
Haze_14775 Corylus avellana HOM05D006554 ORTHO05D008778 4.4e-44 183.0 360 35.8
Cfa007322 Carpinus fangiana HOM05D006554 ORTHO05D008778 1.2e-41 174.9 355 36.3
MD09G1020300 Malus domestica HOM05D006554 ORTHO05D008778 2.7e-41 173.7 370 35.7
Ciclev10015858m.g Citrus clementina HOM05D006554 ORTHO05D008778 3.5e-41 173.3 337 38.9
Duzib147G0564 Durio zibethinus HOM05D006554 ORTHO05D008778 1.7e-40 171.0 375 35.7
TPR.G1120 Trifolium pratense HOM05D006554 ORTHO05D008778 1.7e-40 171.0 360 35.8
Migut.H00036 Erythranthe guttata HOM05D006554 ORTHO05D008778 3.0e-40 170.2 349 33.8
Nitab4.5_0004496g0080 Nicotiana tabacum HOM05D006554 ORTHO05D008778 3.0e-40 170.2 359 35.7
Nitab4.5_0000040g0640 Nicotiana tabacum HOM05D006554 ORTHO05D008778 5.1e-40 169.5 362 34.8
Manes.15G153200 Manihot esculenta HOM05D006554 ORTHO05D008778 1.3e-38 164.9 359 35.4
Sopen02g017020 Solanum pennellii HOM05D006554 ORTHO05D008778 4.8e-38 162.9 371 32.3
Gohir.D04G059400 Gossypium hirsutum HOM05D006554 ORTHO05D008778 2.4e-37 160.6 362 36.2
Gorai.012G066100 Gossypium raimondii HOM05D006554 ORTHO05D008778 2.4e-37 160.6 362 36.2
Medtr7g032890 Medicago truncatula HOM05D006554 ORTHO05D008778 6.9e-37 159.1 356 34.3
vmacro05891 Vaccinium macrocarpon HOM05D006554 ORTHO05D008778 6.9e-37 159.1 365 34.5
Gohir.A05G353700 Gossypium hirsutum HOM05D006554 ORTHO05D008778 9.0e-37 158.7 362 35.9
PGSC0003DMG400006964 Solanum tuberosum HOM05D006554 ORTHO05D008778 9.0e-37 158.7 371 31.5
CiPaw.04G030700 Carya illinoinensis HOM05D006554 ORTHO05D008778 3.4e-36 156.8 354 33.9
Prupe.3G207500 Prunus persica HOM05D006554 ORTHO05D008778 3.4e-36 156.8 364 33.2
Actinidia05967 Actinidia chinensis HOM05D006554 ORTHO05D008778 7.6e-36 155.6 338 35.8
Aqoxy5G03668 Aquilegia oxysepala HOM05D006554 ORTHO05D008778 7.6e-36 155.6 364 35.4
PGR083G2647 Punica granatum HOM05D006554 ORTHO05D008778 7.6e-36 155.6 368 34.8
MSTRG.3126 Avicennia marina HOM05D006554 ORTHO05D008778 9.9e-36 155.2 354 31.6
Solyc02g067900.3 Solanum lycopersicum HOM05D006554 ORTHO05D008778 1.7e-35 154.5 371 31.3
RcHm_v2.0_Chr2g0173581 Rosa chinensis HOM05D006554 ORTHO05D008778 3.8e-35 153.3 358 33.0
Phvul.008G147100 Phaseolus vulgaris HOM05D006554 ORTHO05D008778 6.4e-35 152.5 361 33.2
arahy.Tifrunner.gnm1.ann1.1L0SFZ Arachis hypogaea HOM05D006554 ORTHO05D008778 8.4e-35 152.1 368 36.1
Glyma.19G079100 Glycine max HOM05D006554 ORTHO05D008778 1.4e-34 151.4 371 32.1
FAN14G5462 Fragaria x ananassa HOM05D006554 ORTHO05D008778 1.9e-34 151.0 367 33.5
Glyma.16G067800 Glycine max HOM05D006554 ORTHO05D008778 9.3e-34 148.7 360 33.1
Lsat_1_v5_gn_0_6020 Lactuca sativa HOM05D006554 ORTHO05D008778 1.2e-33 148.3 361 34.6
QL02p073734 Quercus lobata HOM05D006554 ORTHO05D008778 2.7e-33 147.1 352 34.4
Lalb_Chr22g0360641 Lupinus albus HOM05D006554 ORTHO05D008778 3.5e-33 146.7 362 31.8
RhsimUnG0087800 Rhododendron simsii HOM05D006554 ORTHO05D008778 3.5e-33 146.7 355 33.5
Oeu050455.2 Olea europaea HOM05D006554 ORTHO05D008778 6.7e-32 142.5 392 32.4
MELO3C014791.2 Cucumis melo HOM05D006554 ORTHO05D008778 8.7e-32 142.1 364 29.9
Sed0003688 Sechium edule HOM05D006554 ORTHO05D008778 8.7e-32 142.1 364 33.0
AUR62028440 Chenopodium quinoa HOM05D006554 ORTHO05D008778 1.9e-31 141.0 364 31.0
EL10Ac5g11640 Beta vulgaris HOM05D006554 ORTHO05D008778 2.5e-31 140.6 372 32.8
ClCG05G012880 Citrullus lanatus HOM05D006554 ORTHO05D008778 3.3e-31 140.2 364 30.2
Hma1.2p1_0279F.1_g111960 Hydrangea macrophylla HOM05D006554 ORTHO05D008778 4.3e-31 139.8 314 34.1
Lj1g0005465 Lotus japonicus HOM05D006554 ORTHO05D008778 4.3e-31 139.8 360 33.9
FAN14G0519 Fragaria x ananassa HOM05D006554 ORTHO05D008778 1.6e-30 137.9 364 31.6
Cc07_g00120 Coffea canephora HOM05D006554 ORTHO05D008778 2.1e-30 137.5 368 29.9
PSO675G3751 Papaver somniferum HOM05D006554 ORTHO05D008778 2.1e-30 137.5 309 37.2
Eucgr.F01485 Eucalyptus grandis HOM05D006554 ORTHO05D008778 6.2e-30 136.0 90 81.1
Potri.003G101100 Populus trichocarpa HOM05D006554 ORTHO05D008778 1.8e-29 134.4 356 32.3
PSO541G1758 Papaver somniferum HOM05D006554 ORTHO05D008778 5.3e-29 132.9 302 37.1
CANSAT64G1839 Cannabis sativa HOM05D006554 ORTHO05D008778 9.0e-29 132.1 382 31.4
FvH4_6g52060 Fragaria vesca HOM05D006554 ORTHO05D008778 2.0e-28 131.0 362 30.1
FAN05G3817 Fragaria x ananassa HOM05D006554 ORTHO05D008778 4.5e-28 129.8 357 30.5
Eucgr.L02321 Eucalyptus grandis HOM05D006554 ORTHO05D008778 7.6e-28 129.0 64 96.9
Thecc.04G022100 Theobroma cacao HOM05D006554 ORTHO05D008778 4.9e-27 126.3 149 49.7
FAN09G2431 Fragaria x ananassa HOM05D006554 ORTHO05D008778 2.5e-26 124.0 360 29.7
Eucgr.C03321 Eucalyptus grandis HOM05D006554 ORTHO05D008778 3.2e-26 123.6 64 93.8
RhsimUnG0005800 Rhododendron simsii HOM05D006554 ORTHO05D008778 4.2e-26 123.2 358 32.7
ECA246G2886 Erigeron canadensis HOM05D006554 ORTHO05D008778 5.5e-26 122.9 354 29.9
Ah.03g136830 Amaranthus hybridus HOM05D003292 ORTHO05D004237 7.1e-26 122.5 362 31.5
Sabra03G0068900 Salix brachista HOM05D006554 ORTHO05D008778 2.1e-25 120.9 361 30.5
CsaV3_3G027590 Cucumis sativus L. HOM05D006554 ORTHO05D008778 7.9e-25 119.0 123 48.0
Atru.chr6.2449 Acer truncatum HOM05D006554 ORTHO05D008778 1.0e-24 118.6 102 60.8
Nn4g22538 Nelumbo nucifera HOM05D006554 ORTHO05D008778 1.8e-24 117.9 124 50.0
FAN02G3632 Fragaria x ananassa HOM05D006554 ORTHO05D008778 7.4e-23 112.5 354 28.2
SGA_v2.0_scaffold135G34926 Striga asiatica HOM05D006554 ORTHO05D008778 6.3e-22 109.4 364 27.5
VMungo1383G1633 Vigna mungo HOM05D006554 ORTHO05D008778 4.1e-21 106.7 104 53.8
SalBow1G4569 Salvia bowleyana HOM05D006554 ORTHO05D008778 1.0e-19 102.1 361 24.4
Thhalv10027933m.g Eutrema salsugineum HOM05D006554 ORTHO05D008778 8.4e-19 99.0 130 42.3
CSS0050446 Camellia sinensis var. sinensis HOM05D006554 ORTHO05D008778 1.9e-18 97.8 117 49.6
A04p13620 Brassica napus HOM05D004424 ORTHO05D005476 2.5e-18 97.4 128 43.8
BraA04t17023Z Brassica rapa HOM05D004424 ORTHO05D005476 2.5e-18 97.4 128 43.8
Hund23035 Selenicereus undatus HOM05D006554 ORTHO05D008778 4.2e-18 96.7 338 30.8
BolC4t26342H Brassica oleracea HOM05D006554 ORTHO05D008778 9.3e-18 95.5 127 41.7
Sp7g01270 Schrenkiella parvula HOM05D006554 ORTHO05D008778 1.2e-17 95.1 148 37.8
C04p47410 Brassica napus HOM05D004424 ORTHO05D005476 1.6e-17 94.7 127 41.7
BcaB06g27536 Brassica carinata HOM05D006554 ORTHO05D008778 6.1e-17 92.8 148 38.5
CARHR148770 Cardamine hirsuta HOM05D006554 ORTHO05D008778 1.3e-16 91.7 121 44.6
AL5G16780 Arabidopsis lyrata HOM05D006554 ORTHO05D008778 1.9e-15 87.8 152 39.5
AL7G49210 Arabidopsis lyrata HOM05D006554 ORTHO05D008778 1.9e-15 87.8 127 40.9
BolC4t27196H Brassica oleracea HOM05D006554 ORTHO05D008778 2.5e-15 87.4 150 36.0
ATR0199G021 Amborella trichopoda HOM05D006554 ORTHO05D008778 3.3e-15 87.0 105 47.6
Carub.0007s3489 Capsella rubella HOM05D006554 ORTHO05D008778 1.6e-14 84.7 126 37.3
CARHR261360 Cardamine hirsuta HOM05D006554 ORTHO05D008778 2.2e-14 84.3 174 31.0
AT5G40600 Arabidopsis thaliana HOM05D006554 ORTHO05D008778 3.7e-14 83.6 127 40.2
SEGI_16878 Sequoiadendron giganteum HOM05D000336 ORTHO05D002705 3.7e-14 83.6 404 25.2
unitig_52.g17657 Utricularia gibba HOM05D006554 ORTHO05D008778 8.2e-14 82.4 351 24.8
CDE09G0234 Ceratophyllum demersum HOM05D006554 ORTHO05D008778 1.8e-13 81.3 125 37.6
Sp2g16620 Schrenkiella parvula HOM05D006554 ORTHO05D008778 1.8e-13 81.3 158 37.3
AT3G27420 Arabidopsis thaliana HOM05D006554 ORTHO05D008778 3.1e-13 80.5 117 41.0
Carub.0005s0577 Capsella rubella HOM05D006554 ORTHO05D008778 9.0e-13 79.0 247 29.6
Lj7A603G61 Lonicera japonica HOM05D006554 ORTHO05D008778 9.0e-13 79.0 179 31.8
CDE02G2727 Ceratophyllum demersum HOM05D003393 ORTHO05D003916 1.5e-12 78.2 124 37.1
Psat7g108920 Pisum sativum HOM05D006554 ORTHO05D008778 1.5e-12 78.2 283 27.2
BcaB07g30158 Brassica carinata HOM05D006554 ORTHO05D008778 2.6e-12 77.4 137 38.7
BcaC03g17463 Brassica carinata HOM05D006554 ORTHO05D017433 5.9e-12 76.3 128 36.7
C02p54190 Brassica napus HOM05D006554 ORTHO05D008778 1.0e-11 75.5 128 36.7
A02p35470 Brassica napus HOM05D006554 ORTHO05D017433 1.7e-11 74.7 128 39.8
CSS0049853 Camellia sinensis var. sinensis HOM05D006554 ORTHO05D008778 2.2e-11 74.3 74 55.4
VMungo1383G3169 Vigna mungo HOM05D006554 ORTHO05D008778 2.2e-11 74.3 156 31.4
BolC2t11482H Brassica oleracea HOM05D006554 ORTHO05D008778 3.8e-11 73.6 150 32.7
Atru.chr6.2450 Acer truncatum HOM05D006554 ORTHO05D008778 8.5e-11 72.4 188 32.4
Cpa.g.sc130.63 Carica papaya HOM05D006554 ORTHO05D008778 8.5e-11 72.4 202 26.7
CBR_g49972 Chara braunii HOM05D000336 ORTHO05D002705 8.5e-11 72.4 157 31.2
BraA02t08548Z Brassica rapa HOM05D006554 ORTHO05D017433 1.4e-10 71.6 128 37.5
Thhalv10004828m.g Eutrema salsugineum HOM05D006554 ORTHO05D008778 1.9e-10 71.2 218 32.1
HPP92_003738 Vanilla planifolia HOM05D006554 ORTHO05D008778 1.6e-09 68.2 128 37.5
Pp3c18_15420 Physcomitrium patens HOM05D000336 ORTHO05D002705 2.1e-09 67.8 149 30.9
COL.COLO4_29198 Corchorus olitorius HOM05D006554 ORTHO05D008778 3.6e-09 67.0 163 37.4
Ca_06565_v3 Cicer arietinum L. HOM05D006554 ORTHO05D008778 6.1e-09 66.2 147 33.3
DCAR_002966 Daucus carota HOM05D006554 ORTHO05D008778 1.4e-08 65.1 174 32.2
SHI53794 Sapria himalayana HOM05D006554 ORTHO05D008778 3.9e-08 63.5 104 35.6
Aa31LG9G1020 Aethionema arabicum HOM05D006554 ORTHO05D008778 8.8e-08 62.4 182 30.2
A03p48810 Brassica napus HOM05D000336 ORTHO05D002705 1.1e-07 62.0 127 31.5
Mapoly0010s0030 Marchantia polymorpha HOM05D000336 ORTHO05D002705 1.1e-07 62.0 95 35.8
BraA03t13981Z Brassica rapa HOM05D000336 ORTHO05D002705 2.5e-07 60.8 127 30.7
Pp3c21_9250 Physcomitrium patens HOM05D000336 ORTHO05D002705 2.5e-07 60.8 150 28.7
Pp3c22_7000 Physcomitrium patens HOM05D000336 ORTHO05D002705 2.5e-07 60.8 153 31.4
Sc03g0007220 Simmondsia chinensis HOM05D006554 ORTHO05D008778 1.7e-06 58.2 298 26.2
AL5G32870 Arabidopsis lyrata HOM05D000336 ORTHO05D002705 2.2e-06 57.8 127 28.3
Thhalv10010479m.g Eutrema salsugineum HOM05D000336 ORTHO05D002705 2.2e-06 57.8 127 29.1
FAN09G3965 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.8e-06 57.4 149 33.6
Medtr6g033375 Medicago truncatula HOM05D000336 ORTHO05D002705 4.8e-06 56.6 140 27.9
Potri.010G219200 Populus trichocarpa HOM05D000336 ORTHO05D002705 8.2e-06 55.8 130 28.5


User provided reference genes

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