Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 2.1e-58 228.8 111 100.0
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 7.3e-48 193.7 115 82.6
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 2.4e-46 188.7 113 82.3
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 3.1e-46 188.3 113 81.4
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 9.0e-46 186.8 101 89.1
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 4.4e-45 184.5 97 87.6
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 5.8e-45 184.1 113 78.8
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 7.6e-45 183.7 116 77.6
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 1.3e-44 183.0 97 87.6
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 1.3e-44 183.0 113 78.8
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 2.2e-44 182.2 113 79.6
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.2e-44 182.2 113 79.6
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.2e-44 182.2 113 79.6
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.2e-44 182.2 113 79.6
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 8.4e-44 180.3 113 77.0
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 1.4e-43 179.5 113 77.0
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 2.4e-43 178.7 113 74.3
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 4.2e-43 177.9 107 78.5
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 5.4e-43 177.6 116 75.0
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 7.1e-43 177.2 109 78.0
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.6e-42 176.0 113 77.0
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 2.1e-42 175.6 115 76.5
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 3.5e-42 174.9 119 73.9
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 6.0e-42 174.1 99 81.8
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 1.0e-41 173.3 115 73.9
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 1.3e-41 172.9 116 74.1
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 1.7e-41 172.6 109 76.1
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 1.7e-41 172.6 116 74.1
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 1.7e-41 172.6 96 85.4
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 2.3e-41 172.2 109 76.1
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 2.3e-41 172.2 109 78.0
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 3.0e-41 171.8 96 83.3
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 3.0e-41 171.8 109 74.3
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 5.1e-41 171.0 98 83.7
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 5.1e-41 171.0 113 77.0
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 6.6e-41 170.6 103 79.6
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 6.6e-41 170.6 96 80.2
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 8.7e-41 170.2 96 81.2
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 1.5e-40 169.5 105 75.2
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 1.5e-40 169.5 113 73.5
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 1.9e-40 169.1 107 75.7
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 1.9e-40 169.1 112 73.2
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 1.9e-40 169.1 116 75.9
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 1.9e-40 169.1 116 75.9
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 2.5e-40 168.7 103 78.6
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 2.5e-40 168.7 103 78.6
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 2.5e-40 168.7 115 71.3
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 2.5e-40 168.7 116 75.0
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 2.5e-40 168.7 97 81.4
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 2.5e-40 168.7 113 74.3
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 2.5e-40 168.7 99 82.8
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 3.3e-40 168.3 114 72.8
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 4.3e-40 167.9 112 72.3
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 4.3e-40 167.9 97 81.4
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 7.3e-40 167.2 98 77.6
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 7.3e-40 167.2 113 73.5
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 9.6e-40 166.8 99 79.8
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 9.6e-40 166.8 97 80.4
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 1.3e-39 166.4 112 78.6
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 1.3e-39 166.4 97 81.4
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 2.8e-39 165.2 96 80.2
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 2.8e-39 165.2 96 80.2
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 2.8e-39 165.2 102 77.5
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 4.8e-39 164.5 100 79.0
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 1.1e-38 163.3 96 78.1
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 1.4e-38 162.9 98 77.6
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 1.8e-38 162.5 113 70.8
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 3.1e-38 161.8 102 72.5
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 3.1e-38 161.8 108 73.1
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 5.3e-38 161.0 116 74.1
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 9.0e-38 160.2 108 73.1
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 1.2e-37 159.8 118 72.0
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 1.5e-37 159.5 129 65.9
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 1.5e-37 159.5 102 75.5
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 1.5e-37 159.5 102 75.5
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 1.5e-37 159.5 102 75.5
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 1.5e-37 159.5 102 75.5
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 1.5e-37 159.5 97 78.4
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 1.5e-37 159.5 113 68.1
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 2.0e-37 159.1 109 69.7
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 1.7e-36 156.0 82 87.8
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 2.9e-36 155.2 106 68.9
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 2.9e-36 155.2 118 65.3
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 6.4e-36 154.1 99 75.8
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 4.2e-35 151.4 92 79.3
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 2.1e-34 149.1 81 86.4
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 2.8e-31 138.7 97 66.0
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 9.0e-30 133.7 98 61.2
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 4.2e-27 124.8 83 75.9
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 5.5e-27 124.4 96 66.7
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 9.3e-27 123.6 101 54.5
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 1.6e-26 122.9 93 68.8
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 2.1e-26 122.5 93 53.8
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 6.0e-26 120.9 94 61.7
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 9.6e-24 113.6 82 70.7
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 6.9e-22 107.5 97 51.5
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 5.8e-21 104.4 60 81.7
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 3.3e-16 88.6 75 50.7
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 6.5e-12 74.3 121 28.1
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 3.0e-09 65.5 49 65.3
MCO04G361 Micromonas commoda HOM05D007622 ORTHO05D009409 3.3e-08 62.0 78 38.5
VMungo1383G1925 Vigna mungo HOM05D007622 ORTHO05D009409 1.1e-06 57.0 38 65.8


User provided reference genes

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