Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 1.8e-123 446.0 239 100.0
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 3.7e-28 129.4 162 52.5
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 4.8e-28 129.0 171 55.6
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 8.1e-28 128.3 116 64.7
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 8.1e-28 128.3 116 64.7
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 1.4e-27 127.5 109 67.0
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 3.1e-27 126.3 168 49.4
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 3.1e-27 126.3 93 75.3
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 3.1e-27 126.3 93 75.3
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 2.0e-26 123.6 164 54.9
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 2.6e-26 123.2 90 76.7
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 3.4e-26 122.9 110 66.4
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 5.8e-26 122.1 106 65.1
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 5.8e-26 122.1 93 73.1
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 3.8e-25 119.4 114 63.2
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 8.4e-25 118.2 165 49.7
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 1.1e-24 117.9 159 50.9
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 1.4e-24 117.5 90 72.2
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 1.9e-24 117.1 173 49.7
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 2.4e-24 116.7 185 43.8
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 5.5e-24 115.5 108 65.7
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 5.5e-24 115.5 113 63.7
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 7.1e-24 115.2 168 50.0
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 9.3e-24 114.8 185 42.7
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 9.3e-24 114.8 100 68.0
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 1.2e-23 114.4 108 61.1
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 2.1e-23 113.6 185 42.7
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 3.5e-23 112.8 167 51.5
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 3.5e-23 112.8 167 51.5
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 3.5e-23 112.8 167 51.5
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 4.6e-23 112.5 111 60.4
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 6.0e-23 112.1 93 66.7
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 6.0e-23 112.1 186 43.5
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 6.0e-23 112.1 186 43.5
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 6.0e-23 112.1 100 67.0
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 7.9e-23 111.7 167 46.1
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.0e-22 111.3 167 46.1
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 1.0e-22 111.3 91 69.2
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 1.8e-22 110.5 154 51.3
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 1.8e-22 110.5 91 69.2
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 1.8e-22 110.5 174 49.4
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 2.3e-22 110.2 165 50.3
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 3.0e-22 109.8 153 51.0
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 3.9e-22 109.4 170 50.6
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 3.9e-22 109.4 92 72.8
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 5.1e-22 109.0 158 48.7
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 6.7e-22 108.6 202 45.0
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 8.7e-22 108.2 104 64.4
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 1.9e-21 107.1 152 49.3
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 2.5e-21 106.7 197 47.2
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 2.5e-21 106.7 169 50.9
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 3.3e-21 106.3 172 45.3
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 3.3e-21 106.3 199 45.7
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 9.6e-21 104.8 175 46.3
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 9.6e-21 104.8 163 46.0
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 2.1e-20 103.6 165 48.5
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 2.8e-20 103.2 167 44.3
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 3.7e-20 102.8 172 48.3
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 8.2e-20 101.7 168 44.6
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 8.2e-20 101.7 168 44.6
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 1.8e-19 100.5 111 57.7
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 1.8e-19 100.5 168 44.6
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 2.4e-19 100.1 170 46.5
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 2.4e-19 100.1 182 43.4
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 4.0e-19 99.4 111 58.6
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 5.3e-19 99.0 175 48.6
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 6.9e-19 98.6 174 46.0
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 6.9e-19 98.6 145 50.3
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 9.0e-19 98.2 172 47.7
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 3.4e-18 96.3 88 64.8
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 5.8e-18 95.5 175 43.4
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 7.6e-18 95.1 146 43.8
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 1.7e-17 94.0 131 51.1
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 1.7e-17 94.0 131 50.4
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 2.9e-17 93.2 140 49.3
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 4.9e-17 92.4 112 51.8
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 6.5e-17 92.0 114 49.1
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 8.4e-17 91.7 170 42.4
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 1.9e-16 90.5 70 72.9
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 1.9e-16 90.5 170 44.1
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 1.9e-16 90.5 109 56.0
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 3.2e-16 89.7 169 39.6
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 5.5e-16 89.0 160 44.4
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 9.3e-16 88.2 71 70.4
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 2.1e-15 87.0 153 43.1
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 2.1e-15 87.0 94 57.4
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 3.5e-15 86.3 101 53.5
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 7.9e-15 85.1 142 47.9
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 1.0e-14 84.7 164 41.5
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 1.3e-14 84.3 162 42.6
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 1.8e-14 84.0 172 37.8
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 2.3e-14 83.6 110 51.8
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 1.9e-13 80.5 178 41.6
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 5.7e-13 79.0 172 40.1
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 5.7e-13 79.0 179 41.3
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 1.3e-12 77.8 165 41.2
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.6e-12 77.4 108 50.0
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 2.2e-12 77.0 172 40.7
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 4.8e-12 75.9 76 61.8
BcaB01g03134 Brassica carinata HOM05D007264 ORTHO05D008639 2.5e-08 63.5 174 35.6
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 2.5e-08 63.5 85 54.1
Rhsim13G0078000 Rhododendron simsii HOM05D007264 ORTHO05D008639 2.1e-07 60.5 124 41.9
Zm00001eb299600 Zea mays HOM05D016300 ORTHO05D008639 1.0e-06 58.2 61 59.0
Zm00001eb299620 Zea mays HOM05D016300 ORTHO05D008639 1.0e-06 58.2 61 59.0
Zm00001eb440750 Zea mays HOM05D016300 ORTHO05D008639 1.0e-06 58.2 61 59.0
Thhalv10017315m.g Eutrema salsugineum HOM05D007264 ORTHO05D008639 1.8e-06 57.4 172 34.3


User provided reference genes

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