Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01954 Eucalyptus grandis HOM05D005372 ORTHO05D006593 7.5e-70 267.3 159 100.0
Prupe.6G065000 Prunus persica HOM05D005372 ORTHO05D006593 1.1e-44 183.7 160 73.1
Gohir.D07G106400 Gossypium hirsutum HOM05D005372 ORTHO05D006593 1.9e-44 183.0 160 60.0
Duzib168G1893 Durio zibethinus HOM05D005372 ORTHO05D006593 2.4e-44 182.6 160 63.8
FvH4_3g37450 Fragaria vesca HOM05D005372 ORTHO05D006593 9.2e-44 180.6 154 59.7
FAN11G0559 Fragaria x ananassa HOM05D005372 ORTHO05D006593 9.2e-44 180.6 154 70.1
Gorai.001G114500 Gossypium raimondii HOM05D005372 ORTHO05D006593 1.6e-43 179.9 160 59.4
Gohir.A07G102200 Gossypium hirsutum HOM05D005372 ORTHO05D006593 2.0e-43 179.5 160 65.0
MD11G1084700 Malus domestica HOM05D005372 ORTHO05D006593 3.5e-43 178.7 160 66.9
Atru.chr3.4040 Acer truncatum HOM05D005372 ORTHO05D006593 4.6e-43 178.3 161 70.2
Cpa.g.sc112.93 Carica papaya HOM05D005372 ORTHO05D006593 7.8e-43 177.6 162 61.7
PGR119G2477 Punica granatum HOM05D005372 ORTHO05D006593 1.0e-42 177.2 161 71.4
CiPaw.14G062800 Carya illinoinensis HOM05D005372 ORTHO05D006593 1.3e-42 176.8 134 62.7
Thecc.09G309200 Theobroma cacao HOM05D005372 ORTHO05D006593 1.3e-42 176.8 160 63.8
MD03G1080100 Malus domestica HOM05D005372 ORTHO05D006593 1.7e-42 176.4 160 63.8
THA.LOC104810736 Tarenaya hassleriana HOM05D005372 ORTHO05D006593 1.7e-42 176.4 153 56.9
Cfa011626 Carpinus fangiana HOM05D005372 ORTHO05D006593 1.1e-41 173.7 141 78.0
Ciclev10029469m.g Citrus clementina HOM05D005372 ORTHO05D006593 1.5e-41 173.3 149 73.2
Hma1.2p1_0543F.1_g175310 Hydrangea macrophylla HOM05D005372 ORTHO05D006593 3.3e-41 172.2 130 81.5
Dinv17075 Davidia involucrata HOM05D005372 ORTHO05D006593 5.6e-41 171.4 163 71.2
Dinv43019 Davidia involucrata HOM05D005372 ORTHO05D006593 5.6e-41 171.4 163 71.2
Dinv43078 Davidia involucrata HOM05D005372 ORTHO05D006593 5.6e-41 171.4 163 71.2
CANSAT54G2064 Cannabis sativa HOM05D005372 ORTHO05D006593 7.3e-41 171.0 161 65.2
RcHm_v2.0_Chr5g0067341 Rosa chinensis HOM05D005372 ORTHO05D006593 3.6e-40 168.7 141 63.1
TWI75G1302 Tripterygium wilfordii HOM05D005372 ORTHO05D006593 3.6e-40 168.7 158 55.7
TWI79G0177 Tripterygium wilfordii HOM05D005372 ORTHO05D006593 4.7e-40 168.3 102 75.5
MSTRG.14035 Avicennia marina HOM05D005372 ORTHO05D006593 6.2e-40 167.9 145 57.9
PGSC0003DMG400030429 Solanum tuberosum HOM05D005372 ORTHO05D006593 6.2e-40 167.9 161 55.3
Manes.02G123700 Manihot esculenta HOM05D005372 ORTHO05D006593 8.1e-40 167.5 161 68.9
Sopen06g033010 Solanum pennellii HOM05D005372 ORTHO05D006593 8.1e-40 167.5 161 55.3
CAN.G394.95 Capsicum annuum HOM05D005372 ORTHO05D006593 1.1e-39 167.2 161 68.3
Solyc06g076620.3 Solanum lycopersicum HOM05D005372 ORTHO05D006593 2.3e-39 166.0 161 54.7
Lalb_Chr14g0372091 Lupinus albus HOM05D005372 ORTHO05D006593 3.1e-39 165.6 102 75.5
Nitab4.5_0000744g0090 Nicotiana tabacum HOM05D005372 ORTHO05D006593 3.1e-39 165.6 161 56.5
Peaxi162Scf01058g00152 Petunia axillaris HOM05D005372 ORTHO05D006593 4.0e-39 165.2 156 71.2
Nitab4.5_0002718g0040 Nicotiana tabacum HOM05D005372 ORTHO05D006593 6.8e-39 164.5 161 54.0
THA.LOC104799412 Tarenaya hassleriana HOM05D005372 ORTHO05D006593 6.8e-39 164.5 127 61.4
TAR633G2482 Trochodendron aralioides HOM05D005372 ORTHO05D006593 6.8e-39 164.5 145 66.9
SalBow4G1938 Salvia bowleyana HOM05D005372 ORTHO05D006593 1.2e-38 163.7 149 55.0
A03p11910 Brassica napus HOM05D005372 ORTHO05D006593 1.5e-38 163.3 160 54.4
Thhalv10014944m.g Eutrema salsugineum HOM05D005372 ORTHO05D006593 2.0e-38 162.9 146 56.2
Phvul.011G206600 Phaseolus vulgaris HOM05D005372 ORTHO05D006593 2.6e-38 162.5 149 67.1
Potri.009G040100 Populus trichocarpa HOM05D005372 ORTHO05D006593 2.6e-38 162.5 102 73.5
VMungo1127G1276 Vigna mungo HOM05D005372 ORTHO05D006593 2.6e-38 162.5 160 66.9
BraA02t05820Z Brassica rapa HOM05D005372 ORTHO05D006593 3.4e-38 162.2 160 55.0
Sabra09G0028200 Salix brachista HOM05D005372 ORTHO05D006593 3.4e-38 162.2 102 72.5
FAN21G1258 Fragaria x ananassa HOM05D005372 ORTHO05D006593 4.4e-38 161.8 83 81.9
FAN25G0461 Fragaria x ananassa HOM05D005372 ORTHO05D006593 4.4e-38 161.8 83 81.9
Medtr2g097890 Medicago truncatula HOM05D005372 ORTHO05D006593 4.4e-38 161.8 160 58.8
Oeu017419.1 Olea europaea HOM05D005372 ORTHO05D006593 4.4e-38 161.8 134 76.1
Potri.001G246800 Populus trichocarpa HOM05D005372 ORTHO05D006593 4.4e-38 161.8 103 74.8
BcaC03g14063 Brassica carinata HOM05D005372 ORTHO05D006593 5.8e-38 161.4 160 55.0
C02p12980 Brassica napus HOM05D005372 ORTHO05D006593 5.8e-38 161.4 160 55.0
Lalb_Chr24g0397111 Lupinus albus HOM05D005372 ORTHO05D006593 7.5e-38 161.0 91 78.0
Aqoxy1G00762 Aquilegia oxysepala HOM05D005372 ORTHO05D006593 9.8e-38 160.6 157 63.1
C03p14010 Brassica napus HOM05D005372 ORTHO05D006593 9.8e-38 160.6 156 53.8
Migut.K01340 Erythranthe guttata HOM05D005372 ORTHO05D006593 9.8e-38 160.6 121 63.6
Phvul.011G039001 Phaseolus vulgaris HOM05D005372 ORTHO05D006593 9.8e-38 160.6 150 52.0
BcaB05g22467 Brassica carinata HOM05D005372 ORTHO05D006593 1.3e-37 160.2 95 73.7
TPR.G6862 Trifolium pratense HOM05D005372 ORTHO05D006593 1.3e-37 160.2 102 70.6
ECA247G0538 Erigeron canadensis HOM05D005372 ORTHO05D006593 1.7e-37 159.8 94 74.5
A02p07420 Brassica napus HOM05D005372 ORTHO05D006593 2.2e-37 159.5 101 73.3
Psat5g285800 Pisum sativum HOM05D005372 ORTHO05D006593 2.9e-37 159.1 160 57.5
AL8G35370 Arabidopsis lyrata HOM05D005372 ORTHO05D006593 4.9e-37 158.3 146 55.5
BcaB08g36298 Brassica carinata HOM05D005372 ORTHO05D006593 4.9e-37 158.3 88 75.0
BolC3t13848H Brassica oleracea HOM05D005372 ORTHO05D006593 4.9e-37 158.3 158 52.5
Carub.0008s1963 Capsella rubella HOM05D005372 ORTHO05D006593 4.9e-37 158.3 125 68.8
Nn3g19715 Nelumbo nucifera HOM05D005372 ORTHO05D006593 4.9e-37 158.3 102 74.5
TAR636G0867 Trochodendron aralioides HOM05D005372 ORTHO05D006593 4.9e-37 158.3 145 55.9
BraA03t10503Z Brassica rapa HOM05D005372 ORTHO05D006593 6.4e-37 157.9 101 72.3
Glyma.15G033200 Glycine max HOM05D005372 ORTHO05D006593 6.4e-37 157.9 150 68.7
HanXRQChr03g0083951 Helianthus annuus HOM05D005372 ORTHO05D006593 6.4e-37 157.9 101 71.3
AT5G52370 Arabidopsis thaliana HOM05D005372 ORTHO05D006593 8.3e-37 157.5 160 53.8
Cc01_g13660 Coffea canephora HOM05D005372 ORTHO05D006593 8.3e-37 157.5 143 56.6
PSO541G6474 Papaver somniferum HOM05D005372 ORTHO05D006593 1.1e-36 157.1 140 56.4
HanXRQChr04g0109301 Helianthus annuus HOM05D005372 ORTHO05D006593 1.4e-36 156.8 103 69.9
Aqoxy4G02649 Aquilegia oxysepala HOM05D005372 ORTHO05D006593 1.9e-36 156.4 82 80.5
CARHR285220 Cardamine hirsuta HOM05D005372 ORTHO05D006593 1.9e-36 156.4 147 55.8
Sp6g20690 Schrenkiella parvula HOM05D005372 ORTHO05D006593 1.9e-36 156.4 161 53.4
Aa31LG1G11690 Aethionema arabicum HOM05D005372 ORTHO05D006593 2.4e-36 156.0 101 69.3
Glyma.13G341200 Glycine max HOM05D005372 ORTHO05D006593 2.4e-36 156.0 95 75.8
CDE07G0920 Ceratophyllum demersum HOM05D005372 ORTHO05D006593 3.2e-36 155.6 74 87.8
Lj3g0018318 Lotus japonicus HOM05D005372 ORTHO05D006593 3.2e-36 155.6 150 63.3
PSO675G4385 Papaver somniferum HOM05D005372 ORTHO05D006593 3.2e-36 155.6 149 55.0
Lj6g0015977 Lotus japonicus HOM05D005372 ORTHO05D006593 4.1e-36 155.2 102 68.6
SGA_v2.0_scaffold35G14025 Striga asiatica HOM05D005372 ORTHO05D006593 5.4e-36 154.8 131 65.6
AT5G58990 Arabidopsis thaliana HOM05D005372 ORTHO05D006593 7.1e-36 154.5 101 72.3
arahy.Tifrunner.gnm1.ann1.IGF4QT Arachis hypogaea HOM05D005372 ORTHO05D006593 7.1e-36 154.5 102 71.6
Actinidia25121 Actinidia chinensis HOM05D005372 ORTHO05D006593 1.2e-35 153.7 101 72.3
Lsat_1_v5_gn_9_25321 Lactuca sativa HOM05D005372 ORTHO05D006593 1.2e-35 153.7 98 68.4
unitig_26.g9774 Utricularia gibba HOM05D005372 ORTHO05D006593 1.2e-35 153.7 74 87.8
arahy.Tifrunner.gnm1.ann1.UR5XNC Arachis hypogaea HOM05D005372 ORTHO05D006593 1.6e-35 153.3 100 72.0
BcaB01g04621 Brassica carinata HOM05D005372 ORTHO05D006593 2.7e-35 152.5 156 52.6
Glyma.11G111000 Glycine max HOM05D005372 ORTHO05D006593 2.7e-35 152.5 76 85.5
Actinidia08556 Actinidia chinensis HOM05D005372 ORTHO05D006593 3.5e-35 152.1 143 70.6
VMungo1127G1643 Vigna mungo HOM05D005372 ORTHO05D006593 4.6e-35 151.8 92 70.7
MBI14_g28605_MAGBIO Magnolia biondii HOM05D005372 ORTHO05D006593 7.8e-35 151.0 74 87.8
SGA_v2.0_scaffold8G04342 Striga asiatica HOM05D005372 ORTHO05D006593 7.8e-35 151.0 142 59.2
ClCG02G019810 Citrullus lanatus HOM05D005372 ORTHO05D006593 2.3e-34 149.4 159 57.9
Sed0010324 Sechium edule HOM05D005372 ORTHO05D006593 5.1e-34 148.3 137 64.2
FAN16G3555 Fragaria x ananassa HOM05D005372 ORTHO05D006593 8.6e-34 147.5 109 62.4
CSS0039141 Camellia sinensis var. sinensis HOM05D005372 ORTHO05D006593 1.5e-33 146.7 162 57.4
CSS0037054 Camellia sinensis var. sinensis HOM05D005372 ORTHO05D006593 5.6e-33 144.8 162 56.2
AUR62001715 Chenopodium quinoa HOM05D005372 ORTHO05D006593 9.5e-33 144.1 97 68.0
MELO3C025881.2 Cucumis melo HOM05D005372 ORTHO05D006593 9.5e-33 144.1 145 62.8
Rhsim13G0075100 Rhododendron simsii HOM05D005372 ORTHO05D006593 1.2e-32 143.7 75 81.3
CsaV3_6G016530 Cucumis sativus L. HOM05D005372 ORTHO05D006593 1.6e-32 143.3 145 61.4
Hund04902 Selenicereus undatus HOM05D005372 ORTHO05D006593 4.7e-32 141.7 101 66.3
Ah.13g070300 Amaranthus hybridus HOM05D005372 ORTHO05D006593 1.8e-31 139.8 101 66.3
EL10Ac7g16097 Beta vulgaris HOM05D005372 ORTHO05D006593 2.3e-31 139.4 101 66.3
Dinv34320 Davidia involucrata HOM05D001226 ORTHO05D006593 6.8e-31 137.9 135 73.3
Sabra16G0149900 Salix brachista HOM05D005372 ORTHO05D006593 1.5e-30 136.7 102 65.7
SalBow6G3269 Salvia bowleyana HOM05D005372 ORTHO05D006593 1.3e-29 133.7 162 46.9
Haze_24230 Corylus avellana HOM05D005372 ORTHO05D006593 1.9e-28 129.8 111 81.1
QL01p028939 Quercus lobata HOM05D005372 ORTHO05D006593 2.1e-27 126.3 109 75.2
Lj4P191T41 Lonicera japonica HOM05D005372 ORTHO05D006593 1.1e-25 120.6 96 88.5
Os02g0481000 Oryza sativa ssp. japonica HOM05D005372 ORTHO05D006593 1.5e-25 120.2 96 58.3
BolC2t07410H Brassica oleracea HOM05D005372 ORTHO05D006593 1.9e-25 119.8 171 46.2
Zm00001eb066290 Zea mays HOM05D005372 ORTHO05D006593 2.5e-25 119.4 73 69.9
C09p51220 Brassica napus HOM05D005372 ORTHO05D006593 4.7e-24 115.2 101 60.4
Nitab4.5_0000933g0130 Nicotiana tabacum HOM05D005372 ORTHO05D006593 3.1e-23 112.5 122 48.4
DCAR_028257 Daucus carota HOM05D005372 ORTHO05D006593 5.2e-23 111.7 52 86.5
Nn1g02876 Nelumbo nucifera HOM05D005372 ORTHO05D006593 8.9e-23 110.9 53 90.6
Zm00001eb433670 Zea mays HOM05D005372 ORTHO05D006593 1.2e-22 110.5 104 53.8
Oeu002454.1 Olea europaea HOM05D005372 ORTHO05D006593 3.4e-22 109.0 84 64.3
Mapoly0002s0283 Marchantia polymorpha HOM05D005372 ORTHO05D006593 1.2e-19 100.5 74 56.8
ATR0618G182 Amborella trichopoda HOM05D005372 ORTHO05D006593 6.0e-19 98.2 51 82.4
AagrBONN_evm.TU.Sc2ySwM_228.2511 Anthoceros agrestis HOM05D005372 ORTHO05D006593 1.7e-18 96.7 77 57.1
COL.COLO4_19070 Corchorus olitorius HOM05D005372 ORTHO05D006593 4.3e-17 92.0 71 62.0
BraA10t43707Z Brassica rapa HOM05D005372 ORTHO05D006593 5.6e-17 91.7 88 55.7
SHI05895 Sapria himalayana HOM05D005372 ORTHO05D006593 6.2e-16 88.2 82 51.2
Pp3c9_8860 Physcomitrium patens HOM05D005372 ORTHO05D006593 2.4e-15 86.3 74 50.0
Glyma.12G037300 Glycine max HOM05D005372 ORTHO05D006593 1.5e-14 83.6 100 64.0
Sc06g0008390 Simmondsia chinensis HOM05D005372 ORTHO05D006593 1.9e-12 76.6 37 83.8
vmacro03009 Vaccinium macrocarpon HOM05D005372 ORTHO05D006593 4.2e-12 75.5 70 54.3
CBR_g8222 Chara braunii HOM05D005372 ORTHO05D006593 1.2e-11 73.9 75 48.0
MD06G1146500 Malus domestica HOM05D005372 ORTHO05D006593 7.9e-11 71.2 37 86.5
SMO111G0201 Selaginella moellendorffii HOM05D005372 ORTHO05D006593 3.3e-09 65.9 74 41.9
Dinv20930 Davidia involucrata HOM05D005372 ORTHO05D006593 4.3e-09 65.5 38 65.8
Zm00001eb023370 Zea mays HOM05D000798 ORTHO05D000659 7.3e-09 64.7 88 40.9
Dinv21014 Davidia involucrata HOM05D005372 ORTHO05D006593 9.6e-09 64.3 37 67.6
Zm00001eb217580 Zea mays HOM05D000360 ORTHO05D000234 3.6e-08 62.4 38 71.1


User provided reference genes

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