Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01859 Eucalyptus grandis HOM05D004740 ORTHO05D005991 1.7e-230 802.4 420 100.0
PGR102G2346 Punica granatum HOM05D004740 ORTHO05D005991 7.5e-162 574.3 383 81.5
TAR623G0659 Trochodendron aralioides HOM05D004740 ORTHO05D005991 2.9e-161 572.4 394 77.9
Manes.18G127700 Manihot esculenta HOM05D004740 ORTHO05D005991 8.3e-161 570.9 412 76.5
vmacro02923 Vaccinium macrocarpon HOM05D004740 ORTHO05D005991 8.3e-161 570.9 333 88.3
CiPaw.13G069800 Carya illinoinensis HOM05D004740 ORTHO05D005991 1.9e-160 569.7 331 87.3
Nitab4.5_0002737g0070 Nicotiana tabacum HOM05D004740 ORTHO05D005991 1.9e-160 569.7 411 76.6
Rhsim13G0064700 Rhododendron simsii HOM05D004740 ORTHO05D005991 7.1e-160 567.8 399 77.4
Gorai.003G150000 Gossypium raimondii HOM05D004740 ORTHO05D005991 1.2e-159 567.0 332 87.3
Peaxi162Scf00055g00057 Petunia axillaris HOM05D004740 ORTHO05D005991 1.2e-159 567.0 368 80.4
QL01p026440 Quercus lobata HOM05D004740 ORTHO05D005991 1.6e-159 566.6 417 75.8
Gohir.A03G025700 Gossypium hirsutum HOM05D004740 ORTHO05D005991 2.1e-159 566.2 396 77.8
Sed0001589 Sechium edule HOM05D004740 ORTHO05D005991 2.1e-159 566.2 382 80.4
Duzib168G1324 Durio zibethinus HOM05D004740 ORTHO05D005991 2.7e-159 565.8 332 87.3
CSS0045632 Camellia sinensis var. sinensis HOM05D004740 ORTHO05D005991 6.0e-159 564.7 394 76.9
Dinv28694 Davidia involucrata HOM05D004740 ORTHO05D005991 6.0e-159 564.7 423 74.5
RcHm_v2.0_Chr5g0071571 Rosa chinensis HOM05D004740 ORTHO05D005991 6.0e-159 564.7 423 73.8
Nitab4.5_0001121g0110 Nicotiana tabacum HOM05D004740 ORTHO05D005991 7.8e-159 564.3 411 74.9
Thecc.09G357100 Theobroma cacao HOM05D004740 ORTHO05D005991 1.0e-158 563.9 381 79.5
CsaV3_1G036540 Cucumis sativus L. HOM05D004740 ORTHO05D005991 1.7e-158 563.1 365 81.1
TWI75G0989 Tripterygium wilfordii HOM05D004740 ORTHO05D005991 1.7e-158 563.1 401 76.1
COL.COLO4_11143 Corchorus olitorius HOM05D004740 ORTHO05D005991 3.0e-158 562.4 332 87.3
MELO3C020514.2 Cucumis melo HOM05D004740 ORTHO05D005991 3.0e-158 562.4 382 78.3
THA.LOC104800771 Tarenaya hassleriana HOM05D004740 ORTHO05D005991 6.6e-158 561.2 365 80.3
TAR633G1387 Trochodendron aralioides HOM05D004740 ORTHO05D005991 8.6e-158 560.8 327 87.8
Sopen01g002970 Solanum pennellii HOM05D004740 ORTHO05D005991 1.1e-157 560.5 334 87.1
Solyc01g006980.4 Solanum lycopersicum HOM05D004740 ORTHO05D005991 1.5e-157 560.1 334 86.8
Gohir.D03G142800 Gossypium hirsutum HOM05D004740 ORTHO05D005991 1.9e-157 559.7 396 77.0
Sabra09G0059400 Salix brachista HOM05D004740 ORTHO05D005991 3.3e-157 558.9 396 77.5
THA.LOC104826277 Tarenaya hassleriana HOM05D004740 ORTHO05D005991 3.3e-157 558.9 346 82.9
Potri.009G077800 Populus trichocarpa HOM05D004740 ORTHO05D005991 4.3e-157 558.5 396 77.5
Ciclev10028558m.g Citrus clementina HOM05D004740 ORTHO05D005991 9.5e-157 557.4 394 75.6
FvH4_3g39690 Fragaria vesca HOM05D004740 ORTHO05D005991 1.2e-156 557.0 423 72.8
PGSC0003DMG400021362 Solanum tuberosum HOM05D004740 ORTHO05D005991 1.6e-156 556.6 334 86.2
Haze_24407 Corylus avellana HOM05D004740 ORTHO05D005991 2.8e-156 555.8 332 85.8
Aqoxy2G00789 Aquilegia oxysepala HOM05D004740 ORTHO05D005991 8.1e-156 554.3 397 76.6
Sp4g12790 Schrenkiella parvula HOM05D004740 ORTHO05D005991 8.1e-156 554.3 379 77.8
Cfa011772 Carpinus fangiana HOM05D004740 ORTHO05D005991 1.4e-155 553.5 332 85.8
Lj2A1092T52 Lonicera japonica HOM05D004740 ORTHO05D005991 1.4e-155 553.5 387 77.5
arahy.Tifrunner.gnm1.ann1.MX8U3M Arachis hypogaea HOM05D004740 ORTHO05D005991 1.8e-155 553.1 372 79.6
CAN.G911.42 Capsicum annuum HOM05D004740 ORTHO05D005991 3.1e-155 552.4 351 82.6
MD03G1055800 Malus domestica HOM05D004740 ORTHO05D005991 3.1e-155 552.4 409 74.8
Prupe.6G048900 Prunus persica HOM05D004740 ORTHO05D005991 3.1e-155 552.4 384 77.6
SGA_v2.0_scaffold146G36123 Striga asiatica HOM05D004740 ORTHO05D005991 3.1e-155 552.4 385 77.7
Thhalv10016751m.g Eutrema salsugineum HOM05D004740 ORTHO05D005991 4.0e-155 552.0 427 72.6
BraA04t17832Z Brassica rapa HOM05D004740 ORTHO05D005991 6.8e-155 551.2 385 77.7
CANSAT54G2578 Cannabis sativa HOM05D004740 ORTHO05D005991 6.8e-155 551.2 413 73.1
Migut.N00764 Erythranthe guttata HOM05D004740 ORTHO05D005991 6.8e-155 551.2 414 73.9
arahy.Tifrunner.gnm1.ann1.T9C115 Arachis hypogaea HOM05D004740 ORTHO05D005991 8.9e-155 550.8 371 79.2
Glyma.18G057700 Glycine max HOM05D004740 ORTHO05D005991 8.9e-155 550.8 355 81.4
MD11G1056800 Malus domestica HOM05D004740 ORTHO05D005991 8.9e-155 550.8 404 74.5
arahy.Tifrunner.gnm1.ann1.FJ253B Arachis hypogaea HOM05D004740 ORTHO05D005991 2.6e-154 549.3 370 79.5
MSTRG.17889 Avicennia marina HOM05D004740 ORTHO05D005991 3.4e-154 548.9 333 84.7
FAN25G0671 Fragaria x ananassa HOM05D004740 ORTHO05D005991 3.4e-154 548.9 393 75.6
Lj6g0008641 Lotus japonicus HOM05D004740 ORTHO05D005991 4.4e-154 548.5 421 71.7
C04p59110 Brassica napus HOM05D004740 ORTHO05D005991 7.6e-154 547.7 369 78.9
BolC4t27422H Brassica oleracea HOM05D004740 ORTHO05D005991 7.6e-154 547.7 369 78.9
SalBow2G1640 Salvia bowleyana HOM05D004740 ORTHO05D005991 7.6e-154 547.7 412 72.6
AT2G30200 Arabidopsis thaliana HOM05D004740 ORTHO05D005991 1.3e-153 547.0 365 80.0
CARHR123500 Cardamine hirsuta HOM05D004740 ORTHO05D005991 1.3e-153 547.0 368 80.2
AL4G25030 Arabidopsis lyrata HOM05D004740 ORTHO05D005991 2.9e-153 545.8 373 78.8
Carub.0004s1135 Capsella rubella HOM05D004740 ORTHO05D005991 3.8e-153 545.4 414 73.9
Aa31LG5G6500 Aethionema arabicum HOM05D004740 ORTHO05D005991 4.9e-153 545.0 398 75.6
BcaB06g28350 Brassica carinata HOM05D004740 ORTHO05D005991 4.9e-153 545.0 366 78.4
A05p15240 Brassica napus HOM05D004740 ORTHO05D005991 4.9e-153 545.0 367 79.6
ClCG03G000380 Citrullus lanatus HOM05D004740 ORTHO05D005991 4.9e-153 545.0 421 72.9
BcaC02g11103 Brassica carinata HOM05D004740 ORTHO05D005991 6.4e-153 544.7 366 79.2
BraA05t20443Z Brassica rapa HOM05D004740 ORTHO05D005991 6.4e-153 544.7 367 79.6
Ah.15g096090 Amaranthus hybridus HOM05D004740 ORTHO05D005991 8.4e-153 544.3 334 84.4
BolC4t23568H Brassica oleracea HOM05D004740 ORTHO05D005991 8.4e-153 544.3 390 75.9
C04p20390 Brassica napus HOM05D004740 ORTHO05D005991 1.1e-152 543.9 367 79.6
FAN11G1726 Fragaria x ananassa HOM05D004740 ORTHO05D005991 1.1e-152 543.9 446 69.1
FAN16G0900 Fragaria x ananassa HOM05D004740 ORTHO05D005991 1.1e-152 543.9 446 69.1
Lalb_Chr18g0051371 Lupinus albus HOM05D004740 ORTHO05D005991 1.1e-152 543.9 387 74.7
BcaC02g08041 Brassica carinata HOM05D004740 ORTHO05D005991 1.4e-152 543.5 369 78.0
CDE06G2756 Ceratophyllum demersum HOM05D004740 ORTHO05D005991 1.9e-152 543.1 332 84.0
PSO801G0690 Papaver somniferum HOM05D004740 ORTHO05D005991 1.9e-152 543.1 403 73.4
BolC3t14364H Brassica oleracea HOM05D004740 ORTHO05D005991 2.4e-152 542.7 368 79.3
PSO339G6109 Papaver somniferum HOM05D004740 ORTHO05D005991 2.4e-152 542.7 388 76.3
Glyma.11G164500 Glycine max HOM05D004740 ORTHO05D005991 3.2e-152 542.3 332 83.7
HanXRQChr01g0012131 Helianthus annuus HOM05D004740 ORTHO05D005991 4.1e-152 542.0 391 74.2
Hund29009 Selenicereus undatus HOM05D004740 ORTHO05D005991 4.1e-152 542.0 332 84.9
Hund29013 Selenicereus undatus HOM05D004740 ORTHO05D005991 4.1e-152 542.0 332 84.9
BcaB02g10307 Brassica carinata HOM05D004740 ORTHO05D005991 5.4e-152 541.6 367 79.6
EL10Ac7g15913 Beta vulgaris HOM05D004740 ORTHO05D005991 7.1e-152 541.2 333 84.1
Medtr3g031380 Medicago truncatula HOM05D004740 ORTHO05D005991 7.1e-152 541.2 411 72.0
Ca_15002_v3 Cicer arietinum L. HOM05D004740 ORTHO05D005991 1.2e-151 540.4 420 71.0
Phvul.006G073300 Phaseolus vulgaris HOM05D004740 ORTHO05D005991 1.2e-151 540.4 373 77.7
FAN21G3316 Fragaria x ananassa HOM05D004740 ORTHO05D005991 2.7e-151 539.3 446 68.8
FAN21G3649 Fragaria x ananassa HOM05D004740 ORTHO05D005991 2.7e-151 539.3 446 68.8
Psat5g153440 Pisum sativum HOM05D004740 ORTHO05D005991 3.5e-151 538.9 412 71.1
DCAR_018228 Daucus carota HOM05D004740 ORTHO05D005991 6.0e-151 538.1 381 76.4
Sc12g0002010 Simmondsia chinensis HOM05D004740 ORTHO05D005991 6.0e-151 538.1 388 76.3
unitig_60.g25555 Utricularia gibba HOM05D004740 ORTHO05D005991 1.0e-150 537.3 376 76.1
Nn2g13251 Nelumbo nucifera HOM05D004740 ORTHO05D005991 3.0e-150 535.8 370 78.6
Os03g0297400 Oryza sativa ssp. japonica HOM05D004740 ORTHO05D005991 8.6e-150 534.3 377 76.7
VMungo0540G0639 Vigna mungo HOM05D004740 ORTHO05D005991 1.1e-149 533.9 332 83.4
Lalb_Chr15g0083211 Lupinus albus HOM05D004740 ORTHO05D005991 2.5e-149 532.7 391 73.1
AUR62009675 Chenopodium quinoa HOM05D004740 ORTHO05D005991 3.6e-148 528.9 387 73.9
AUR62001878 Chenopodium quinoa HOM05D004740 ORTHO05D005991 6.2e-148 528.1 387 73.9
ECA248G3413 Erigeron canadensis HOM05D004740 ORTHO05D005991 1.4e-147 526.9 327 81.7
HPP92_013770 Vanilla planifolia HOM05D004740 ORTHO05D005991 6.9e-147 524.6 332 81.9
Zm00001eb013760 Zea mays HOM05D004740 ORTHO05D005991 3.4e-146 522.3 348 78.2
MBI05_g35601_MAGBIO Magnolia biondii HOM05D004740 ORTHO05D005991 4.4e-146 521.9 332 81.6
HanXRQChr01g0012161 Helianthus annuus HOM05D004740 ORTHO05D005991 4.2e-144 515.4 332 79.8
SEGI_23058 Sequoiadendron giganteum HOM05D004740 ORTHO05D005991 7.1e-144 514.6 386 72.0
arahy.Tifrunner.gnm1.ann1.C8ZV0S Arachis hypogaea HOM05D004740 ORTHO05D005991 1.6e-143 513.5 354 78.0
Cc01_g14810 Coffea canephora HOM05D004740 ORTHO05D005991 2.7e-143 512.7 297 88.2
ATR0594G208 Amborella trichopoda HOM05D004740 ORTHO05D005991 1.3e-142 510.4 297 88.6
CiPaw.14G054500 Carya illinoinensis HOM05D004740 ORTHO05D005991 7.3e-141 504.6 297 86.2
TPR.G35611 Trifolium pratense HOM05D004740 ORTHO05D005991 1.6e-140 503.4 307 84.4
Lsat_1_v5_gn_5_174621 Lactuca sativa HOM05D004740 ORTHO05D005991 2.1e-140 503.1 431 66.6
Mapoly0009s0078 Marchantia polymorpha HOM05D004740 ORTHO05D005991 3.6e-140 502.3 327 79.8
Pp3c20_19160 Physcomitrium patens HOM05D004740 ORTHO05D005991 1.8e-139 500.0 382 70.7
BcaB01g04122 Brassica carinata HOM05D004740 ORTHO05D005991 7.6e-138 494.6 297 86.2
Actinidia32613 Actinidia chinensis HOM05D004740 ORTHO05D005991 2.9e-137 492.7 332 77.4
BcaC01g06023 Brassica carinata HOM05D004740 ORTHO05D005991 9.3e-136 487.6 368 73.9
AagrBONN_evm.TU.Sc2ySwM_228.2654 Anthoceros agrestis HOM05D004740 ORTHO05D005991 1.3e-132 477.2 333 73.6
Sed0003355 Sechium edule HOM05D004740 ORTHO05D005991 4.8e-132 475.3 312 78.5
A04p22970 Brassica napus HOM05D004740 ORTHO05D005991 2.0e-130 469.9 335 77.0
SMO200G0259 Selaginella moellendorffii HOM05D004740 ORTHO05D005991 1.9e-128 463.4 317 75.4
C03p19860 Brassica napus HOM05D004740 ORTHO05D005991 5.5e-128 461.8 319 78.7
SHI19203 Sapria himalayana HOM05D004740 ORTHO05D005991 2.3e-126 456.4 368 66.8
Atru.chr3.4126 Acer truncatum HOM05D004740 ORTHO05D005991 1.9e-125 453.4 414 63.8
Nn2g10995 Nelumbo nucifera HOM05D004740 ORTHO05D005991 7.4e-117 424.9 332 71.7
Cpa.g.sc2.364 Carica papaya HOM05D004740 ORTHO05D005991 3.1e-115 419.5 246 89.4
Cre14.g621650 Chlamydomonas reinhardtii HOM05D004740 ORTHO05D005991 1.5e-114 417.2 319 70.8
arahy.Tifrunner.gnm1.ann1.R7F6LC Arachis hypogaea HOM05D004740 ORTHO05D005991 4.5e-114 415.6 272 81.2
Potri.001G282600 Populus trichocarpa HOM05D004740 ORTHO05D005991 2.3e-110 403.3 369 64.8
CBR_g33923 Chara braunii HOM05D004740 ORTHO05D005991 2.8e-108 396.4 345 61.4
PRCOL_00005899 Prasinoderma coloniale HOM05D004740 ORTHO05D005991 5.9e-106 388.7 279 71.0
MCO01G413 Micromonas commoda HOM05D004740 ORTHO05D005991 3.8e-97 359.4 331 59.2
GSVIVG01024639001 Vitis vinifera HOM05D004740 ORTHO05D005991 2.4e-91 340.1 198 88.4
A03p16880 Brassica napus HOM05D004740 ORTHO05D005991 8.8e-78 295.0 198 78.8
BraA03t10976Z Brassica rapa HOM05D004740 ORTHO05D005991 8.8e-78 295.0 198 78.8
Oeu005355.3 Olea europaea HOM05D003290 ORTHO05D005991 1.2e-71 274.6 165 83.6
Actinidia23202 Actinidia chinensis HOM05D004740 ORTHO05D005991 6.8e-70 268.9 333 52.0
PRCOL_00000466 Prasinoderma coloniale HOM05D004740 ORTHO05D005991 2.9e-65 253.4 294 48.0
MCO04G051 Micromonas commoda HOM05D004740 ORTHO05D005991 3.0e-57 226.9 293 44.7
GSVIVG01024638001 Vitis vinifera HOM05D004740 ORTHO05D005991 1.5e-56 224.6 129 85.3
Cre02.g088250 Chlamydomonas reinhardtii HOM05D004740 ORTHO05D005991 3.1e-54 216.9 332 41.6
Actinidia02620 Actinidia chinensis HOM05D004740 ORTHO05D005991 6.8e-54 215.7 154 76.6
COL.COLO4_24546 Corchorus olitorius HOM05D004740 ORTHO05D008255 1.7e-49 201.1 216 56.0
Nitab4.5_0006359g0020 Nicotiana tabacum HOM05D004740 ORTHO05D005991 8.1e-47 192.2 178 61.8
Nitab4.5_0000644g0120 Nicotiana tabacum HOM05D004740 ORTHO05D005991 3.8e-36 156.8 149 59.1
Nitab4.5_0006126g0030 Nicotiana tabacum HOM05D004740 ORTHO05D005991 9.2e-35 152.1 213 46.5
Oeu025052.1 Olea europaea HOM05D004740 ORTHO05D005991 9.6e-32 142.1 135 59.3
Zm00001eb396720 Zea mays HOM05D004740 ORTHO05D444996 9.0e-30 135.6 80 86.2
HPP92_013838 Vanilla planifolia HOM05D004740 ORTHO05D005991 7.8e-26 122.5 86 70.9
MBI10_g37352_MAGBIO Magnolia biondii HOM05D004740 ORTHO05D241996 1.6e-18 98.2 75 72.0
Nitab4.5_0000644g0100 Nicotiana tabacum HOM05D004740 ORTHO05D284956 1.2e-13 82.0 48 85.4
HPP92_012003 Vanilla planifolia HOM05D004740 ORTHO05D429499 9.9e-13 79.0 85 54.1
COL.COLO4_37924 Corchorus olitorius HOM05D004740 ORTHO05D005991 2.9e-12 77.4 51 70.6
Carub.0004s1136 Capsella rubella HOM05D004740 ORTHO05D005991 8.4e-12 75.9 42 81.0
VMungo0331G0938 Vigna mungo HOM05D000577 ORTHO05D001093 2.1e-10 71.2 62 64.5
MBI15_g35007_MAGBIO Magnolia biondii HOM05D000363 ORTHO05D017376 1.3e-09 68.6 42 83.3


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