Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01845 Eucalyptus grandis HOM05D008517 ORTHO05D010482 1.5e-138 496.1 248 100.0
Dinv12288 Davidia involucrata HOM05D008517 ORTHO05D010482 1.4e-35 154.1 251 33.1
Lj2A1104T76 Lonicera japonica HOM05D008517 ORTHO05D010482 2.8e-31 139.8 229 33.6
TAR633G1539 Trochodendron aralioides HOM05D000050 ORTHO05D010482 4.8e-31 139.0 235 32.3
PGR119G1844 Punica granatum HOM05D008517 ORTHO05D010482 6.2e-31 138.7 192 41.1
Lj6g0010191 Lotus japonicus HOM05D008517 ORTHO05D010482 2.0e-29 133.7 192 32.8
Manes.02G211300 Manihot esculenta HOM05D008517 ORTHO05D010482 4.5e-29 132.5 167 37.1
Atru.chr10.2344 Acer truncatum HOM05D008517 ORTHO05D010482 1.7e-28 130.6 242 26.9
Ca_15071_v3 Cicer arietinum L. HOM05D008517 ORTHO05D010482 8.4e-28 128.3 193 30.1
arahy.Tifrunner.gnm1.ann1.Q24W9G Arachis hypogaea HOM05D008517 ORTHO05D010482 5.5e-27 125.6 236 27.5
BcaB02g10328 Brassica carinata HOM05D008517 ORTHO05D010482 5.5e-27 125.6 246 33.3
arahy.Tifrunner.gnm1.ann1.92WL97 Arachis hypogaea HOM05D008517 ORTHO05D010482 2.7e-26 123.2 232 27.6
Psat5g147520 Pisum sativum HOM05D008517 ORTHO05D010482 4.6e-26 122.5 192 29.7
TPR.G13887 Trifolium pratense HOM05D008517 ORTHO05D010482 4.6e-26 122.5 193 29.5
ClCG03G000030 Citrullus lanatus HOM05D008517 ORTHO05D010482 6.1e-26 122.1 228 30.3
AT2G30505 Arabidopsis thaliana HOM05D008517 ORTHO05D010482 2.3e-25 120.2 245 31.8
CSS0018299 Camellia sinensis var. sinensis HOM05D008517 ORTHO05D010482 3.0e-25 119.8 248 29.8
Cpa.g.sc2.275 Carica papaya HOM05D008517 ORTHO05D010482 3.9e-25 119.4 192 35.9
Medtr3g062470 Medicago truncatula HOM05D008517 ORTHO05D010482 3.9e-25 119.4 192 29.7
A05p14960 Brassica napus HOM05D008517 ORTHO05D010482 6.7e-25 118.6 247 32.8
BraA05t20422Z Brassica rapa HOM05D008517 ORTHO05D010482 6.7e-25 118.6 247 32.8
BolC4t23540H Brassica oleracea HOM05D008517 ORTHO05D010482 8.7e-25 118.2 246 32.5
CARHR123960 Cardamine hirsuta HOM05D008517 ORTHO05D010482 8.7e-25 118.2 230 33.0
Sp4g13060 Schrenkiella parvula HOM05D008517 ORTHO05D010482 8.7e-25 118.2 202 34.7
MELO3C020481.2 Cucumis melo HOM05D008517 ORTHO05D010482 1.1e-24 117.9 228 29.4
Lalb_Chr15g0085691 Lupinus albus HOM05D008517 ORTHO05D010482 1.1e-24 117.9 192 29.7
AL4G25390 Arabidopsis lyrata HOM05D008517 ORTHO05D010482 1.9e-24 117.1 202 34.7
Lalb_Chr18g0054121 Lupinus albus HOM05D008517 ORTHO05D010482 1.9e-24 117.1 231 29.9
BcaC02g11142 Brassica carinata HOM05D008517 ORTHO05D010482 2.5e-24 116.7 246 32.5
C04p20010 Brassica napus HOM05D008517 ORTHO05D010482 2.5e-24 116.7 246 32.5
Carub.0004s1167 Capsella rubella HOM05D008517 ORTHO05D010482 2.5e-24 116.7 235 31.5
Aa31LG5G6260 Aethionema arabicum HOM05D008517 ORTHO05D010482 4.3e-24 115.9 160 38.1
Rhsim13G0058200 Rhododendron simsii HOM05D008517 ORTHO05D010482 2.2e-23 113.6 188 30.9
BcaB06g28372 Brassica carinata HOM05D008517 ORTHO05D010482 3.7e-23 112.8 195 34.4
BcaC02g08016 Brassica carinata HOM05D008517 ORTHO05D010482 4.8e-23 112.5 232 31.0
C04p59390 Brassica napus HOM05D008517 ORTHO05D010482 4.8e-23 112.5 232 31.0
BolC4t27447H Brassica oleracea HOM05D008517 ORTHO05D010482 4.8e-23 112.5 232 31.0
Phvul.006G080100 Phaseolus vulgaris HOM05D008517 ORTHO05D010482 4.8e-23 112.5 188 28.7
BraA04t17851Z Brassica rapa HOM05D008517 ORTHO05D010482 8.2e-23 111.7 232 31.0
A04p23240 Brassica napus HOM05D008517 ORTHO05D010482 1.1e-22 111.3 232 31.0
THA.LOC104800796 Tarenaya hassleriana HOM05D008517 ORTHO05D010482 3.1e-22 109.8 189 36.0
Thhalv10016822m.g Eutrema salsugineum HOM05D008517 ORTHO05D010482 1.2e-21 107.8 243 29.6
MSTRG.12716 Avicennia marina HOM05D008517 ORTHO05D010482 7.7e-21 105.1 202 30.2
Actinidia23156 Actinidia chinensis HOM05D000033 ORTHO05D000913 3.8e-20 102.8 212 29.7
HanXRQChr06g0182401 Helianthus annuus HOM05D008517 ORTHO05D010482 5.0e-20 102.4 202 28.2
FAN21G3878 Fragaria x ananassa HOM05D016692 ORTHO05D010482 7.2e-19 98.6 259 25.5
Glyma.18G051200 Glycine max HOM05D008517 ORTHO05D010482 7.2e-19 98.6 162 27.8
Nn1g01788 Nelumbo nucifera HOM05D005178 ORTHO05D006123 9.4e-19 98.2 208 26.4
VMungo0540G2173 Vigna mungo HOM05D008517 ORTHO05D010482 1.6e-18 97.4 187 26.2
CANSAT54G1933 Cannabis sativa HOM05D008517 ORTHO05D010482 7.9e-18 95.1 245 26.5
FvH4_3g40830 Fragaria vesca HOM05D016692 ORTHO05D010482 1.4e-17 94.4 259 25.1
FAN11G0742 Fragaria x ananassa HOM05D016692 ORTHO05D010482 1.8e-17 94.0 259 25.1
RcHm_v2.0_Chr5g0073561 Rosa chinensis HOM05D016692 ORTHO05D010482 1.8e-17 94.0 243 26.3
FAN25G0531 Fragaria x ananassa HOM05D000033 ORTHO05D000913 3.9e-17 92.8 251 25.9
Glyma.11G199600 Glycine max HOM05D008517 ORTHO05D010482 5.1e-17 92.4 190 24.2
ATR1127G036 Amborella trichopoda HOM05D005178 ORTHO05D006123 6.7e-17 92.0 209 24.9
Lsat_1_v5_gn_8_99661 Lactuca sativa HOM05D008517 ORTHO05D010482 9.7e-16 88.2 171 32.7
Sed0007690 Sechium edule HOM05D008517 ORTHO05D010482 9.7e-16 88.2 237 27.4
Gorai.008G123300 Gossypium raimondii HOM05D005178 ORTHO05D006123 8.2e-15 85.1 212 26.4
Gohir.D12G113800 Gossypium hirsutum HOM05D005178 ORTHO05D006123 1.8e-14 84.0 208 25.5
Hma1.2p1_0384F.1_g141000 Hydrangea macrophylla HOM05D005178 ORTHO05D006123 1.7e-12 77.4 165 22.4
Hma1.2p1_2972F.1_g331100 Hydrangea macrophylla HOM05D005178 ORTHO05D006123 1.7e-12 77.4 169 21.9
MBI06_g02230_MAGBIO Magnolia biondii HOM05D005178 ORTHO05D006123 2.2e-12 77.0 168 28.0
Dinv32550 Davidia involucrata HOM05D005178 ORTHO05D006123 3.8e-12 76.3 163 25.2
PSO135G0875 Papaver somniferum HOM05D005178 ORTHO05D006123 5.5e-11 72.4 168 28.0
PSO384G3117 Papaver somniferum HOM05D005178 ORTHO05D006123 7.2e-11 72.0 165 28.5
CANSAT56G4005 Cannabis sativa HOM05D005178 ORTHO05D006123 4.7e-10 69.3 172 27.9
Dinv43890 Davidia involucrata HOM05D005178 ORTHO05D006123 4.7e-10 69.3 165 21.8
Nn5g26812 Nelumbo nucifera HOM05D008517 ORTHO05D010482 4.7e-10 69.3 150 28.7
Rhsim07G0007300 Rhododendron simsii HOM05D005178 ORTHO05D006123 6.1e-10 68.9 164 23.2
HPP92_005223 Vanilla planifolia HOM05D005178 ORTHO05D006123 2.3e-09 67.0 214 24.3
Sed0006216 Sechium edule HOM05D005178 ORTHO05D006123 2.0e-08 63.9 206 22.8
CsaV3_6G003970 Cucumis sativus L. HOM05D005178 ORTHO05D006123 1.3e-07 61.2 155 25.2
Medtr5g087760 Medicago truncatula HOM05D000973 ORTHO05D000652 1.3e-07 61.2 186 23.7
MELO3C029922.2 Cucumis melo HOM05D005178 ORTHO05D006123 4.8e-07 59.3 155 24.5
THA.LOC104802056 Tarenaya hassleriana HOM05D005178 ORTHO05D006123 8.2e-07 58.5 167 23.4
HPP92_026775 Vanilla planifolia HOM05D005178 ORTHO05D006123 1.1e-06 58.2 207 23.7
Pp3c23_12930 Physcomitrium patens HOM05D000973 ORTHO05D003779 4.1e-06 56.2 207 23.2


User provided reference genes

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