Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 3.1e-75 285.0 142 100.0
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 1.7e-33 146.4 121 61.2
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 8.5e-33 144.1 110 67.3
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 9.4e-32 140.6 110 67.3
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 8.0e-31 137.5 112 65.2
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 1.4e-30 136.7 121 60.3
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 1.8e-30 136.3 112 65.2
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 1.8e-30 136.3 112 65.2
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 2.3e-30 136.0 112 65.2
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 5.2e-30 134.8 105 64.8
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 8.8e-30 134.0 127 55.1
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 8.8e-30 134.0 110 64.5
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 1.5e-29 133.3 121 58.7
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 1.5e-29 133.3 109 63.3
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 2.0e-29 132.9 127 55.9
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 2.6e-29 132.5 118 57.6
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 2.6e-29 132.5 105 62.9
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 3.3e-29 132.1 124 57.3
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 5.7e-29 131.3 112 63.4
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 5.7e-29 131.3 123 56.9
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 7.5e-29 131.0 103 61.2
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 1.7e-28 129.8 120 56.7
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 2.2e-28 129.4 105 61.9
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 2.2e-28 129.4 115 57.4
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 2.8e-28 129.0 113 61.9
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 6.3e-28 127.9 128 51.6
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 6.3e-28 127.9 128 51.6
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 8.2e-28 127.5 126 53.2
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 8.2e-28 127.5 126 53.2
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 8.2e-28 127.5 100 63.0
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 1.4e-27 126.7 120 56.7
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.8e-27 126.3 103 64.1
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 2.4e-27 125.9 120 55.8
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 3.1e-27 125.6 111 61.3
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 3.1e-27 125.6 100 65.0
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 4.1e-27 125.2 103 63.1
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 4.1e-27 125.2 103 63.1
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 4.1e-27 125.2 103 63.1
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 7.0e-27 124.4 106 62.3
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 7.0e-27 124.4 109 59.6
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 9.1e-27 124.0 113 59.3
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 9.1e-27 124.0 100 64.0
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 1.2e-26 123.6 125 52.0
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 1.6e-26 123.2 100 62.0
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 2.0e-26 122.9 99 62.6
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 2.0e-26 122.9 107 59.8
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 3.5e-26 122.1 128 51.6
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 1.0e-25 120.6 114 58.8
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 1.7e-25 119.8 102 59.8
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.7e-25 119.8 109 56.0
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 1.7e-25 119.8 109 56.0
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 2.9e-25 119.0 126 51.6
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 3.8e-25 118.6 100 61.0
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 5.0e-25 118.2 99 59.6
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 6.5e-25 117.9 110 56.4
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 8.5e-25 117.5 118 53.4
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 8.5e-25 117.5 102 59.8
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 8.5e-25 117.5 116 54.3
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.1e-24 117.1 127 51.2
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 1.5e-24 116.7 119 52.9
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 1.9e-24 116.3 109 55.0
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 2.5e-24 115.9 100 59.0
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 2.5e-24 115.9 100 60.0
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 3.2e-24 115.5 105 55.2
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 7.2e-24 114.4 108 54.6
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 9.4e-24 114.0 107 55.1
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 1.2e-23 113.6 116 54.3
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 2.1e-23 112.8 119 50.4
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 2.1e-23 112.8 94 59.6
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 2.7e-23 112.5 100 58.0
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 2.7e-23 112.5 100 58.0
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 3.6e-23 112.1 95 61.1
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 3.6e-23 112.1 103 52.4
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 3.6e-23 112.1 103 56.3
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 4.7e-23 111.7 80 60.0
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 4.7e-23 111.7 105 56.2
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 8.0e-23 110.9 95 62.1
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 8.0e-23 110.9 102 55.9
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 8.0e-23 110.9 111 51.4
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 1.0e-22 110.5 101 56.4
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 1.0e-22 110.5 105 55.2
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 1.4e-22 110.2 102 55.9
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 1.4e-22 110.2 105 55.2
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 1.8e-22 109.8 102 54.9
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 2.3e-22 109.4 102 54.9
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 2.3e-22 109.4 103 54.4
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 2.3e-22 109.4 69 72.5
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 4.0e-22 108.6 102 55.9
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 4.0e-22 108.6 62 75.8
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 4.0e-22 108.6 117 50.4
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 5.2e-22 108.2 117 47.0
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 6.8e-22 107.8 117 50.4
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 8.8e-22 107.5 102 55.9
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 1.2e-21 107.1 105 57.1
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 3.4e-21 105.5 107 55.1
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 4.4e-21 105.1 102 55.9
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 4.4e-21 105.1 102 55.9
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 4.4e-21 105.1 102 55.9
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 4.4e-21 105.1 105 52.4
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 5.7e-21 104.8 97 57.7
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 7.5e-21 104.4 102 55.9
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 7.5e-21 104.4 102 54.9
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 9.8e-21 104.0 114 51.8
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 9.8e-21 104.0 94 55.3
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 1.7e-20 103.2 100 55.0
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 2.2e-20 102.8 99 50.5
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 2.2e-20 102.8 105 55.2
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 2.2e-20 102.8 118 46.6
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 2.8e-20 102.4 102 54.9
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 2.8e-20 102.4 101 55.4
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 4.1e-19 98.6 69 62.3
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 9.1e-19 97.4 66 62.1
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 9.1e-19 97.4 105 53.3
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 2.7e-18 95.9 103 47.6
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 2.7e-18 95.9 99 49.5
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 3.5e-18 95.5 67 61.2
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 3.5e-18 95.5 66 62.1
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 7.7e-18 94.4 102 52.0
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 1.3e-17 93.6 66 60.6
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 1.7e-17 93.2 81 55.6
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 2.3e-17 92.8 70 62.9
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 8.6e-17 90.9 89 55.1
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 1.9e-16 89.7 93 50.5
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 2.5e-16 89.4 105 49.5
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 1.2e-15 87.0 66 54.5
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 1.4e-14 83.6 77 49.4
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 1.4e-14 83.6 77 49.4
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 1.8e-14 83.2 82 46.3
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 1.8e-14 83.2 82 46.3
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 1.8e-14 83.2 82 46.3
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 1.8e-14 83.2 82 46.3
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 9.5e-08 60.8 60 41.7


User provided reference genes

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