Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01776 Eucalyptus grandis HOM05D002652 ORTHO05D002739 6.4e-54 213.8 104 100.0
Eucgr.I00042 Eucalyptus grandis HOM05D002652 ORTHO05D002739 7.3e-50 200.3 104 94.2
Eucgr.K00744 Eucalyptus grandis HOM05D002652 ORTHO05D002739 2.6e-31 138.7 101 69.3
Oeu059391.1 Olea europaea HOM05D002652 ORTHO05D002739 1.6e-17 92.8 97 47.4
Dinv29797 Davidia involucrata HOM05D002652 ORTHO05D002739 6.9e-16 87.4 105 41.0
GSVIVG01027929001 Vitis vinifera HOM05D002652 ORTHO05D002739 6.9e-16 87.4 104 40.4
HanXRQChr07g0194071 Helianthus annuus HOM05D002652 ORTHO05D002739 1.2e-15 86.7 104 41.3
Rhsim02G0047400 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.5e-15 86.3 104 38.5
GSVIVG01027930001 Vitis vinifera HOM05D002652 ORTHO05D002739 3.4e-15 85.1 97 43.3
Potri.010G191400 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.7e-14 82.8 97 43.3
Actinidia39934 Actinidia chinensis HOM05D002652 ORTHO05D002739 5.0e-14 81.3 104 37.5
Potri.T121000 Populus trichocarpa HOM05D002652 ORTHO05D002739 5.0e-14 81.3 104 41.3
Oeu020135.1 Olea europaea HOM05D002652 ORTHO05D002739 8.5e-14 80.5 104 39.4
Migut.N00315 Erythranthe guttata HOM05D002652 ORTHO05D002739 1.4e-13 79.7 102 41.2
Prupe.1G049700 Prunus persica HOM05D002652 ORTHO05D002739 1.9e-13 79.3 106 39.6
RhsimUnG0195300 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.5e-13 79.0 97 38.1
Potri.T121200 Populus trichocarpa HOM05D002652 ORTHO05D002739 5.5e-13 77.8 97 40.2
Potri.T121301 Populus trichocarpa HOM05D002652 ORTHO05D002739 5.5e-13 77.8 97 40.2
Rhsim02G0046100 Rhododendron simsii HOM05D002652 ORTHO05D002739 9.4e-13 77.0 104 35.6
Lsat_1_v5_gn_2_104120 Lactuca sativa HOM05D002652 ORTHO05D002739 1.6e-12 76.3 99 34.3
Rhsim02G0046000 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.6e-12 76.3 104 34.6
Oeu061866.1 Olea europaea HOM05D002652 ORTHO05D002739 6.1e-12 74.3 95 38.9
Haze_25448 Corylus avellana HOM05D002652 ORTHO05D002739 1.0e-11 73.6 104 39.4
ECA247G3161 Erigeron canadensis HOM05D002652 ORTHO05D002739 1.8e-11 72.8 94 36.2
SalBow2G0549 Salvia bowleyana HOM05D002652 ORTHO05D002739 1.8e-11 72.8 100 41.0
ECA238G3361 Erigeron canadensis HOM05D000095 ORTHO05D002739 3.9e-11 71.6 94 38.3
Duzib151G0030 Durio zibethinus HOM05D002652 ORTHO05D002739 5.1e-11 71.2 99 35.4
Migut.N00313 Erythranthe guttata HOM05D002652 ORTHO05D002739 6.7e-11 70.9 97 36.1
Prupe.1G050100 Prunus persica HOM05D002652 ORTHO05D002739 6.7e-11 70.9 105 38.1
Nn5g27876 Nelumbo nucifera HOM05D002652 ORTHO05D002739 8.8e-11 70.5 106 35.8
Duzib151G0998 Durio zibethinus HOM05D002652 ORTHO05D002739 1.5e-10 69.7 103 36.9
Hma1.2p1_0385F.1_g141620 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 1.5e-10 69.7 96 33.3
TAR365G0384 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.5e-10 69.7 97 36.1
Rhsim02G0047200 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.0e-10 69.3 104 35.6
Thecc.04G266900 Theobroma cacao HOM05D002652 ORTHO05D002739 3.3e-10 68.6 97 38.1
Nn1g00655 Nelumbo nucifera HOM05D002652 ORTHO05D002739 4.3e-10 68.2 99 36.4
Nn1g00661 Nelumbo nucifera HOM05D002652 ORTHO05D002739 4.3e-10 68.2 97 36.1
Lsat_1_v5_gn_2_105441 Lactuca sativa HOM05D002652 ORTHO05D002739 7.4e-10 67.4 99 33.3
Nn1g00660 Nelumbo nucifera HOM05D002652 ORTHO05D002739 7.4e-10 67.4 99 35.4
TAR174G0001 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.3e-09 66.6 97 36.1
Rhsim09G0015400 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.7e-09 66.2 94 33.0
Aqoxy7G00431 Aquilegia oxysepala HOM05D002652 ORTHO05D002739 2.2e-09 65.9 98 36.7
COL.COLO4_15898 Corchorus olitorius HOM05D002652 ORTHO05D002739 2.8e-09 65.5 98 36.7
FvH4_4g04990 Fragaria vesca HOM05D002652 ORTHO05D002739 2.8e-09 65.5 98 35.7
Prupe.1G050000 Prunus persica HOM05D002652 ORTHO05D002739 2.8e-09 65.5 106 35.8
FvH4_4g04980 Fragaria vesca HOM05D002652 ORTHO05D002739 3.7e-09 65.1 107 36.4
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 3.7e-09 65.1 107 36.4
Potri.019G026780 Populus trichocarpa HOM05D002652 ORTHO05D002739 3.7e-09 65.1 105 33.3
Potri.019G027200 Populus trichocarpa HOM05D002652 ORTHO05D002739 4.8e-09 64.7 98 33.7
Prupe.1G049600 Prunus persica HOM05D002652 ORTHO05D002739 4.8e-09 64.7 106 34.9
Migut.G00567 Erythranthe guttata HOM05D002652 ORTHO05D002739 1.4e-08 63.2 107 36.4
Hma1.2p1_0565F.1_g179480 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 1.4e-08 63.2 96 31.2
Sabra19G0038900 Salix brachista HOM05D002652 ORTHO05D002739 1.8e-08 62.8 105 32.4
Duzib147G0896 Durio zibethinus HOM05D002652 ORTHO05D002739 2.4e-08 62.4 104 31.7
TAR636G1048 Trochodendron aralioides HOM05D002652 ORTHO05D002739 3.1e-08 62.0 104 33.7
MSTRG.4180 Avicennia marina HOM05D002652 ORTHO05D002739 4.1e-08 61.6 105 35.2
COL.COLO4_15987 Corchorus olitorius HOM05D002652 ORTHO05D002739 4.1e-08 61.6 98 33.7
SalBow2G1631 Salvia bowleyana HOM05D002652 ORTHO05D002739 5.3e-08 61.2 104 33.7
Ciclev10006564m.g Citrus clementina HOM05D002652 ORTHO05D002739 6.9e-08 60.8 105 31.4
Potri.019G026860 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.2e-07 60.1 98 31.6
Haze_11472 Corylus avellana HOM05D002652 ORTHO05D002739 1.5e-07 59.7 97 30.9
Nn1g00657 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.5e-07 59.7 107 33.6
MSTRG.4181 Avicennia marina HOM05D002652 ORTHO05D002739 2.6e-07 58.9 105 34.3
Aa31LG9G4210 Aethionema arabicum HOM05D002652 ORTHO05D002739 3.4e-07 58.5 98 33.7
RcHm_v2.0_Chr4g0395751 Rosa chinensis HOM05D002652 ORTHO05D002739 3.4e-07 58.5 105 32.4
FvH4_3g15020 Fragaria vesca HOM05D002652 ORTHO05D002739 5.9e-07 57.8 102 34.3
CiPaw.08G106600 Carya illinoinensis HOM05D002652 ORTHO05D002739 1.0e-06 57.0 105 33.3
FAN25G0267 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.0e-06 57.0 104 33.7
TAR636G2313 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.3e-06 56.6 104 32.7
DCAR_030374 Daucus carota HOM05D002652 ORTHO05D002739 2.2e-06 55.8 91 34.1
Ciclev10005927m.g Citrus clementina HOM05D002652 ORTHO05D002739 2.9e-06 55.5 97 28.9
Nn1g06038 Nelumbo nucifera HOM05D002652 ORTHO05D002739 5.0e-06 54.7 88 34.1
Prupe.4G134500 Prunus persica HOM05D002652 ORTHO05D002739 6.5e-06 54.3 104 31.7
RcHm_v2.0_Chr4g0395571 Rosa chinensis HOM05D002652 ORTHO05D002739 8.5e-06 53.9 102 34.3


User provided reference genes

Program Settings